Chapter 11 - The future of population genomics in developing countries

Authors: Möller, Marlo, Sima, Carene Anne Alene Ndong, Petersen, Desiree C.

Source: In Population Genomics in the Developing World 2025:191-202

Chapter 9 - Direct-to-consumer (DTC) genetic testing and the population genomics industry

Authors: Uren, Caitlin, Petersen, Desiree C.

Source: In Population Genomics in the Developing World 2025:159-173

Chapter 1 - Population genomics—The fundamentals

Authors: Petersen, Desiree C., Croock, Dayna A.

Source: In Population Genomics in the Developing World 2025:1-30

Data Harmonization Guidelines to Combine Multi‐platform Genomic Data from Admixed Populations and Boost Power in Genome‐Wide Association Studies.

Authors: Croock, Dayna, Swart, Yolandi, Schurz, Haiko, Petersen, Desiree C., Möller, Marlo, Uren, Caitlin

Source: Current Protocols; Jun2024, Vol. 4 Issue 6, p1-22, 22p

Optical mapping reveals a higher level of genomic architecture of chained fusions in cancer

Authors: Chan, Eva K. F., Cameron, Daniel L., Petersen, Desiree C., Lyons, Ruth J., Baldi, Benedetta F., Papenfuss, Anthony T., Thomas, David M., Hayes, Vanessa M.

Source: Genome research. 28(5):726-738

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN615836289&indx=1&recIds=ETOCRN615836289

Contributors

Authors: Basu, Analabha, Carstens, Nadia, Chimusa, Emile R., Choudhury, Ananyo, Croock, Dayna A., Cuttler, Katelyn, der Merwe, Nicole van, Glanzmann, Brigitte, Karamperis, Kariofyllis, Kinnear, Craig, Kotze, Maritha J., Kroon, Elouise Elizabeth, Lea, Amanda J., Müller-Nedebock, Amica Corda, Möller, Marlo, Nieves-Colón, Maria A., Patrinos, George P., Petersen, Desiree C., Ramsay, Michèle, Reynolds, Austin W., Sengupta, Dhriti, Sima, Carene Anne Alene Ndong, Siwada, Anwani, Swart, Yolandi, Syntia Munung, Nchangwi, Uren, Caitlin, van Rensburg, Roland

Source: In Population Genomics in the Developing World 2025:xi-xiii

Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil)

Authors: Miller, Webb, Hayes, Vanessa M., Ratan, Aakrosh, Petersen, Desiree C., Wittekindt, Nicola E., Miller, Jason, Walenz, Brian, Knight, James, Qi, Ji, Zhao, Fangqing, Wang, Qingyu, Bedoya-Reina, Oscar C., Katiyar, Neerja, Tomsho, Lynn P., Kasson, Lindsay McClellan, Hardie, Rae-Anne, Woodbridge, Paula, Tindall, Elizabeth A., Bertelsen, Mads Frost, Dixon, Dale, Pyecroft, Stephen, Helgen, Kristofer M., Lesk, Arthur M., Pringle, Thomas H., Patterson, Nick, Zhang, Yu, Kreiss, Alexandre, Woods, Gregory M., Jones, Menna E., Schuster, Stephan C.

Source: Proceedings of the National Academy of Sciences of the United States of America, 2011 Jul . 108(30), 12348-12353.

Access URL: https://www.jstor.org/stable/27979005

African KhoeSan ancestry linked to high-risk prostate cancer

Authors: Petersen, Desiree C., Jaratlerdsiri, Weerachai, van Wyk, Abraham, Chan, Eva K. F., Fernandez, Pedro, Lyons, Ruth J., Mutambirw, Shingai B. A., van der Merwe, Andre, Venter, Philip A., Bates, William, Bornman, M. S. Riana, Hayes, Vanessa M.

Source: BMC medical genomics. 12(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100127205249.0x000001&indx=1&recIds=ETOCvdc_100127205249.0x000001

Prostate cancer genetic risk and associated aggressive disease in men of African ancestry.

Authors: Soh, Pamela X. Y., Mmekwa, Naledi, Petersen, Desiree C., Gheybi, Kazzem, van Zyl, Smit, Jiang, Jue, Patrick, Sean M., Campbell, Raymond, Jaratlerdseri, Weerachai, Mutambirwa, Shingai B. A., Bornman, M. S. Riana, Hayes, Vanessa M.

Source: Nature Communications; 6/26/2023, Vol. 14 Issue 1, p1-14, 14p

The immunogenetics of tuberculosis (TB) susceptibility.

Authors: Ndong Sima, Carene Anne Alene, Smith, Dayna, Petersen, Desiree C., Schurz, Haiko, Uren, Caitlin, Möller, Marlo

Source: Immunogenetics; Jun2023, Vol. 75 Issue 3, p215-230, 16p

Subject Terms: TUBERCULOSIS, MYCOBACTERIUM tuberculosis, DISEASE risk factors, THERAPEUTICS, MONOGENIC & polygenic inheritance (Genetics), IMMUNOGENETICS

Effects of human TRIM5α polymorphisms on antiretroviral function and susceptibility to human immunodeficiency virus infection

Authors: Javanbakht, Hassan, An, Ping, Gold, Bert, Petersen, Desiree C., O'Huigin, Colm, Nelson, George W., O'Brien, Stephen J., Kirk, Gregory D., Detels, Roger, Buchbinder, Susan, Donfield, Sharyne, Shulenin, Sergey, Song, Byeongwoon, Perron, Michel J., Stremlau, Matthew, Sodroski, Joseph, Dean, Michael, Winkler, Cheryl

Source: In Virology 2006 354(1):15-27

African Genetic Representation in the Context of SARS-CoV-2 Infection and COVID-19 Severity.

Authors: Petersen, Desiree C., Steyl, Chrystal, Scholtz, Denise, Baker, Bienyameen, Abdullah, Ibtisam, Uren, Caitlin, Möller, Marlo

Source: Frontiers in Genetics; 5/10/2022, Vol. 13, p1-6, 6p

Subject Terms: COVID-19, PANDEMICS, SARS-CoV-2

Interpretation of custom designed Illumina genotype cluster plots for targeted association studies and next-generation sequence validation

Authors: Tindall Elizabeth A, Petersen Desiree C, Nikolaysen Stina, Miller Webb, Schuster Stephan C, Hayes Vanessa M

Source: BMC Research Notes, Vol 3, Iss 1, p 39 (2010)

Subject Terms: Medicine, Biology (General), QH301-705.5, Science (General), Q1-390

File Description: electronic resource

Relation: http://www.biomedcentral.com/1756-0500/3/39; https://doaj.org/toc/1756-0500

Access URL: https://doaj.org/article/0ebb8f713d1b4a45bf78cdaf8d8c72b7

Complex Patterns of Genomic Admixture within Southern Africa.

Authors: Petersen, Desiree C.¹, Libiger, Ondrej², Tindall, Elizabeth A.¹, Hardie, Rae-Anne^3,4, Hannick, Linda I.^1,5, Glashoff, Richard H.⁶, Mukerji, Mitali⁷, Fernandez, Pedro⁸, Haacke, Wilfrid⁹, Schork, Nicholas J., Hayes, Vanessa M.^1,3,10 vhayes@jcvi.org

Source: PLoS Genetics. Mar2013, Vol. 9 Issue 3, Special section p1-17. 17p. 3 Graphs, 2 Maps.

Subject Terms: *HUMAN genetics, *GENDER, *BANTU-speaking peoples, *FORAGING behavior (Humans)

Geographic Terms: AFRICA

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Human origins in a southern African palaeo-wetland and first migrations.

Authors: Chan, Eva K. F., Timmermann, Axel, Baldi, Benedetta F., Moore, Andy E., Lyons, Ruth J., Lee, Sun-Seon, Kalsbeek, Anton M. F., Petersen, Desiree C., Rautenbach, Hannes, Förtsch, Hagen E. A., Bornman, M. S. Riana, Hayes, Vanessa M.

Source: Nature; 11/7/2019, Vol. 575 Issue 7781, p185-189, 5p, 5 Diagrams, 2 Charts, 1 Graph, 3 Maps

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Development, Evaluation, and Implementation of a Pan-African Cancer Research Network: Men of African Descent and Carcinoma of the Prostate.

Authors: Andrews, Caroline, Fortier, Brian, Hayward, Amy, Lederman, Ruth, Petersen, Lindsay, McBride, Jo, Petersen, Desiree C., Ajayi, Olabode, Kachambwa, Paidamoyo, Seutloali, Moleboheng, Shoko, Aubrey, Mokhosi, Mamokhosana, Hiller, Reinhard, Adams, Marcia, Ongaco, Chrissie, Pugh, Elizabeth, Romm, Jane, Shelford, Tameka, Chinegwundoh, Frank, Adusei, Ben

Source: Journal of Global Oncology; 9/27/2018, Vol. 4, p1-14, 14p

Subject Terms: PROSTATE cancer treatment, CANCER diagnosis, MEDICAL records, NUCLEIC acid isolation methods, GENOTYPES

Effective Project Management of a Pan-African Cancer Research Network: Men of African Descent and Carcinoma of the Prostate (MADCaP).

Authors: Odiaka, Emeka, Lounsbury, David W., Jalloh, Mohamed, Adusei, Ben, Diallo, Thierno Amadou, Kane, Papa Moussa Sene, Rockson, Isabella, Okyne, Vicky, Irusen, Hayley, Pentz, Audrey, Makinde, Ifeoluwa, Ajibola, Olalekan Hafees, Petersen, Lindsay, McBride, Jo, Petersen, Desiree C., Mante, Sunny, Agalliu, Ilir, Adebiyi, Akindele Olupelumi, Popoola, Olufemi, Yeboah, Edward

Source: Journal of Global Oncology; 9/27/2018, Vol. 4, p1-12, 12p

Subject Terms: PROSTATE cancer treatment, MIDDLE-income countries, PROJECT management, MEDICAL education, STRATEGIC planning