Comparative analysis of human and mouse CpG islands using dbCGI

Authors: Yalcin, Dicle, Otu, Hasan H.

Source: 2017 IEEE International Conference on Electro Information Technology (EIT) Electro Information Technology (EIT), 2017 IEEE International Conference on. :211-216 May, 2017

Relation: 2017 IEEE International Conference on Electro Information Technology (EIT)

Patterns and Persistence of Perioperative Plasma and Cerebrospinal Fluid Neuroinflammatory Protein Biomarkers After Elective Orthopedic Surgery Using SOMAscan

Authors: Dillon, Simon T., Otu, Hasan H., Ngo, Long H., Fong, Tamara G., Vasunilashorn, Sarinnapha M., Xie, Zhongcong, Kunze, Lisa J., Vlassakov, Kamen V., Abdeen, Ayesha, Lange, Jeffrey K., Earp, Brandon E., Cooper, Zara R., Schmitt, Eva M., Arnold, Steven E., Hshieh, Tammy T., Jones, Richard N., Inouye, Sharon K., Marcantonio, Edward R., Libermann, Towia A.

Source: Anesthesia & analgesia. 136(1):163-175

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100194383277.0x000001&indx=1&recIds=ETOCvdc_100194383277.0x000001

Serum Protein Signatures Using Aptamer-Based Proteomics for Minimal Change Disease and Membranous Nephropathy

Authors: Muruve, Daniel A., Debiec, Hanna, Dillon, Simon T., Gu, Xuesong, Plaisier, Emmanuelle, Can, Handan, Otu, Hasan H., Libermann, Towia A., Ronco, Pierre

Source: Kidney international reports. 7(7):1539-1556

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100167220827.0x000001&indx=1&recIds=ETOCvdc_100167220827.0x000001

Integration of Multi-Omics Data Using Probabilistic Graph Models andExternal Knowledge

Authors: Tripp, Bridget A., Otu, Hasan H.

Source: Current Bioinformatics. 17(1):37-47

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100140401426.0x000001&indx=1&recIds=ETOCvdc_100140401426.0x000001

Proteome-Wide Analysis Using SOMAscan Identifies and Validates Chitinase-3-Like Protein 1 as a Risk and Disease Marker of Delirium Among Older Adults Undergoing Major Elective Surgery

Authors: Vasunilashorn, Sarinnapha M, Dillon, Simon T, Chan, Noel Y, Fong, Tamara G, Joseph, Marie, Tripp, Bridget, Xie, Zhongcong, Ngo, Long H, Lee, Chun Geun, Elias, Jack A, Otu, Hasan H, Inouye, Sharon K, Marcantonio, Edward R, Libermann, Towia A

Source: Journals of gerontology.Series A.Biological sciences and medical sciences. 77(3):484-493

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100144308195.0x000001&indx=1&recIds=ETOCvdc_100144308195.0x000001

Multivariable Predictive Model of Postoperative Delirium in Cardiac Surgery Patients: Proteomic and Demographic Contributions.

Authors: Gonçalves, Maria C. B., Khera, Tanvi, Otu, Hasan H., Narayanan, Shilpa, Dillon, Simon T., Shanker, Akshay, Gu, Xuesong, Jung, Yoojin, Ngo, Long H., Marcantonio, Edward R., Libermann, Towia A., Subramaniam, Balachundhar

Source: Anesthesia & Analgesia; Feb2025, Vol. 140 Issue 2, p476-487, 12p

A dynamic Bayesian framwork to learn temporal gene interactions using external knowledge

Authors: Agyuz, Umut, Isci, Senol, Ozturk, Cengizhan, Ademoglu, Ahmet, Otu, Hasan H.

Source: 2013 8th International Symposium on Health Informatics and Bioinformatics Health Informatics and Bioinformatics (HIBIT), 2013 8th International Symposium on. :1-5 Sep, 2013

Relation: 2013 8th International Symposium on Health Informatics and Bioinformatics (HIBIT)

Detecting gene interactions within a Bayesian Network framework using external knowledge

Authors: Isci, Senol, Agyuz, Umut, Ozturk, Cengizhan, Otu, Hasan H.

Source: 2012 7th International Symposium on Health Informatics and Bioinformatics Health Informatics and Bioinformatics (HIBIT), 2012 7th International Symposium on. :82-87 Apr, 2012

Relation: 2012 7th International Symposium on Health Informatics and Bioinformatics (HIBIT)

Physico-chemical properties of DNA in phylogeny construction

Authors: Bakis, Yasin, Sezerman, O. Ugur, Otu, Hasan H.

Source: 2010 5th International Symposium on Health Informatics and Bioinformatics Health Informatics and Bioinformatics (HIBIT), 2010 5th International Symposium on. :27-30 Apr, 2010

Relation: 2010 5th International Symposium on Health Informatics and Bioinformatics (HIBIT)

Identification of Plasma Proteome Signatures Associated With Surgery Using SOMAscan

Authors: Fong, Tamara G., Chan, Noel Y., Dillon, Simon T., Zhou, Wenxiao, Tripp, Bridget, Ngo, Long H., Otu, Hasan H., Inouye, Sharon K., Vasunilashorn, Sarinnapha M., Cooper, Zara, Xie, Zhongcong, Marcantonio, Edward R., Libermann, Towia A.

Source: Annals of surgery. 273(4):732-742

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100121717876.0x000001&indx=1&recIds=ETOCvdc_100121717876.0x000001

An Unbiased Predictive Model to Detect DNA Methylation Propensity of CpG Islands in the Human Genome

Authors: Yalcin, Dicle, Otu, Hasan H.

Source: Current Bioinformatics. 16(2):179-196

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100163437488.0x000001&indx=1&recIds=ETOCvdc_100163437488.0x000001

Unexpected effects of systemic steroids on the CRSwNP proteome: is protein upregulation more important than inhibition?

Authors: Workman, Alan D., Miyake, Michelle M., Nocera, Angela L., Mueller, Sarina K., Finn, Kristen, Otu, Hasan H., Libermann, Towia A., Bleier, Benjamin S.

Source: International forum of allergy & rhinology. 10(3):334-342

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100149747738.0x000001&indx=1&recIds=ETOCvdc_100149747738.0x000001

Integrated Multi-Omics Analysis of Cerebrospinal Fluid in Postoperative Delirium.

Authors: Tripp, Bridget A., Dillon, Simon T., Yuan, Min, Asara, John M., Vasunilashorn, Sarinnapha M., Fong, Tamara G., Inouye, Sharon K., Ngo, Long H., Marcantonio, Edward R., Xie, Zhongcong, Libermann, Towia A., Otu, Hasan H.

Source: Biomolecules (2218-273X); Aug2024, Vol. 14 Issue 8, p924, 22p

Subject Terms: SYSTEMS biology, MULTIOMICS, LIPIDOMICS, CEREBROSPINAL fluid, ORTHOPEDIC surgery

Neutrophil activation in systemic capillary leak syndrome (Clarkson disease)

Authors: Xie, Zhihui, Kuhns, Douglas B., Gu, Xuesong, Otu, Hasan H., Libermann, Towia A., Gallin, John I., Parikh, Samir M., Druey, Kirk M.

Source: Journal of cellular and molecular medicine. 23(8):5119-5127

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100124796052.0x000001&indx=1&recIds=ETOCvdc_100124796052.0x000001

Translating transcription: proteomics in chronic rhinosinusitis with nasal polyps reveals significant discordance with messenger RNA expression

Authors: Workman, Alan D., Nocera, Angela L., Mueller, Sarina K., Otu, Hasan H., Libermann, Towia A., Bleier, Benjamin S.

Source: International forum of allergy & rhinology. 9(7):776-786

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100086719315.0x000001&indx=1&recIds=ETOCvdc_100086719315.0x000001

Higher C-Reactive Protein Levels Predict Postoperative Delirium in Older Patients Undergoing Major Elective Surgery: A Longitudinal Nested Case-Control Study

Authors: Dillon, Simon T., Vasunilashorn, Sarinnapha M., Ngo, Long, Otu, Hasan H., Inouye, Sharon K., Jones, Richard N., Alsop, David C., Kuchel, George A., Metzger, Eran D., Arnold, Steven E., Marcantonio, Edward R., Libermann, Towia A.

Source: In Biological Psychiatry 15 January 2017 81(2):145-153

Nicotine Exposure During Pregnancy Results in Persistent Midline Epithelial Seam With Improper Palatal Fusion

Authors: Ozturk, Ferhat, Sheldon, Elizabeth, Sharma, Janki, Canturk, Kemal Murat, Otu, Hasan H., Nawshad, Ali

Source: Nicotine & Tobacco Research, 2016 May 01. 18(5), 604-612.

Access URL: https://www.jstor.org/stable/26770271

Detecting Microbial Dysbiosis Associated with Pediatric Crohn Disease Despite the High Variability of the Gut Microbiota

Authors: Wang, Feng, Kaplan, Jess L., Gold, Benjamin D., Bhasin, Manoj K., Ward, Naomi L., Kellermayer, Richard, Kirschner, Barbara S., Heyman, Melvin B., Dowd, Scot E., Cox, Stephen B., Dogan, Haluk, Steven, Blaire, Ferry, George D., Cohen, Stanley A., Baldassano, Robert N., Moran, Christopher J., Garnett, Elizabeth A., Drake, Lauren, Otu, Hasan H., Mirny, Leonid A., Libermann, Towia A., Winter, Harland S., Korolev, Kirill S.

Source: In Cell Reports 2 February 2016 14(4):945-955

Placenta accreta spectrum: biomarker discovery using plasma proteomics

Authors: Shainker, Scott A., Silver, Robert M., Modest, Anna M., Hacker, Michele R., Hecht, Jonathan L., Salahuddin, Saira, Dillon, Simon T., Ciampa, Erin J., D'Alton, Mary E., Otu, Hasan H., Abuhamad, Alfred Z., Einerson, Brett D., Branch, D. Ware, Wylie, Blair J., Libermann, Towia A., Karumanchi, S. Ananth

Source: In American Journal of Obstetrics and Gynecology September 2020 223(3):433-433

Targeted metabolomics analysis of postoperative delirium

Authors: Tripp, Bridget A., Dillon, Simon T., Yuan, Min, Asara, John M., Vasunilashorn, Sarinnapha M., Fong, Tamara G., Metzger, Eran D., Inouye, Sharon K., Xie, Zhongcong, Ngo, Long H., Marcantonio, Edward R., Libermann, Towia A., Otu, Hasan H.

Source: Scientific reports. 11(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100193079903.0x000001&indx=1&recIds=ETOCvdc_100193079903.0x000001