Homologous recombination repair status in metastatic prostate cancer by next-generation sequencing and functional immunofluorescence

Authors: Arce-Gallego, Sara ^{1, 15}, Cresta Morgado, Pablo ^{1, 2, 15}, Delgado-Serrano, Luisa ^{1, 15}, Simonetti, Sara ^{3, 15}, Gonzalez, Macarena ^{1, 4}, Romero-Lozano, Paula ⁵, Marmolejo, David ^{1, 4}, Morales-Barrera, Rafael ^{1, 4}, Arnau, Gisela Mir ¹, Semidey, Maria Eugenia ⁶, Aguilar, Daniel ¹, Cordoba-Terreros, Sarai ¹, Mast, Richard ⁷, de Albert, Matias ⁷, Planas, Jacques ⁸, Cuadras, Mercè ⁸, Maldonado, Xavier ⁹, Suarez, Cristina ^{1, 4}, Casanova-Salas, Irene ¹, Figols, Mariona ¹⁰, Cros, Sara ¹¹, Mas, Alba ¹², Nonell, Lara ¹², Dienstmann, Rodrigo ^{2, 13}, Nuciforo, Paolo ³, Vivancos, Ana ⁵, Llop-Guevara, Alba ¹⁴, Carles, Joan ^{1, 4}, Serra, Violeta ^{14, ∗}, Mateo, Joaquin ^{1, 4, 16, ∗∗}

Source: In Cell Reports Medicine 18 February 2025 6(2)

Multi-omics data integration methods and their applications in psychiatric disorders

Authors: Sathyanarayanan, Anita, Mueller, Tamara T., Ali Moni, Mohammad, Schueler, Katja, Baune, Bernhard T., Lio, Pietro, Mehta, Divya, Baune, Bernhard T, Dierssen, Mara, Ebert, Bjarke, Fabbri, Chiara, Fusar-Poli, Paolo, Gennarelli, Massimo, Harmer, Catherine, Howes, Oliver D., Janzing, Joost G.E., Maron, Eduard, Minelli, Alessandra, Nonell, Lara, Pisanu, Claudia, Potier, Marie-Claude, Rybakowski, Filip, Serretti, Alessandro, Squassina, Alessio, Stacey, David, van Westrhenen, Roos, Xicota, Laura

Source: European neuropsychopharmacology. 69:26-46

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100186898162.0x000001&indx=1&recIds=ETOCvdc_100186898162.0x000001

The target antigen determines the mechanism of acquired resistance to T cell-based therapies

Authors: Martínez-Sabadell, Alex, Morancho, Beatriz, Rius Ruiz, Irene, Román Alonso, Macarena, Ovejero Romero, Pablo, Escorihuela, Marta, Chicote, Irene, Palmer, Hector G., Nonell, Lara, Alemany-Chavarria, Mercè, Klein, Christian, Bacac, Marina, Arribas, Joaquín, Arenas, Enrique J.

Source: In Cell Reports 18 October 2022 41(3)

New transcriptome and clinical findings of platelet‐activating factor in chronic spontaneous urticaria: Pathogenic and treatment relevance

Authors: Andrades, Evelyn, Clarós, Miquel, Torres, Juan Vicente, Nonell, Lara, González, Mónica, Curto‐Barredo, Laia, Rozas‐Muñoz, Eduardo, Gimeno, Ramon, Barranco, Carlos, Pujol, Ramon M., Izquierdo, Iñaki, Giménez‐Arnau, Ana M.

Source: BioFactors. 48(6):1284-1294

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100169397524.0x000001&indx=1&recIds=ETOCvdc_100169397524.0x000001

Transcriptional response to a Mediterranean diet intervention exerts a modulatory effect on neuroinflammation signaling pathway

Authors: Almanza-Aguilera, Enrique, Hernáez, Alvaro, Corella, Dolores, Aguayo, Daniel Muñoz, Ros, Emilio, Portolés, Olga, Valussi, Julieta, Estruch, Ramon, Coltell, Oscar, Subirana, Isaac, Salas-Salvadó, Jordi, Ruiz-Canela, Miguel, de la Torre, Rafael, Nonell, Lara, Fitó, Montserrat, Castañer, Olga

Source: Nutritional neuroscience. 25(2):256-265

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100144174751.0x000001&indx=1&recIds=ETOCvdc_100144174751.0x000001

The importance of data transformation in RNA-Seq preprocessing for bladder cancer subtyping.

Authors: Acedo-Terrades, Ariadna, Perera-Bel, Júlia, Nonell, Lara

Source: BMC Research Notes; 2/10/2025, Vol. 18 Issue 1, p1-8, 8p

Subject Terms: RNA sequencing, TUMOR classification, BLADDER cancer, GENE expression, PROGNOSIS, CENTROID

Chronic lymphocytic leukemia–like monoclonal B-cell lymphocytosis exhibits an increased inflammatory signature that is reduced in early-stage chronic lymphocytic leukemia

Authors: Blanco, Gonzalo, Puiggros, Anna, Sherry, Barbara, Nonell, Lara, Calvo, Xavier, Puigdecanet, Eulàlia, Chiu, Pui Yan, Kieso, Yasmine, Ferrer, Gerardo, Palacios, Florencia, Arnal, Magdalena, Rodríguez-Rivera, María, Gimeno, Eva, Abella, Eugènia, Rai, Kanti R., Abrisqueta, Pau, Bosch, Francesc, Calon, Alexandre, Ferrer, Ana, Chiorazzi, Nicholas, Espinet, Blanca

Source: In Experimental Hematology March 2021 95:68-80

Reduced expansion of CD94/NKG2C+ NK cells in chronic lymphocytic leukemia and CLL‐like monoclonal B‐cell lymphocytosis is not related to increased human cytomegalovirus seronegativity or NKG2C deletions

Authors: Puiggros, Anna, Blanco, Gonzalo, Muntasell, Aura, Rodríguez‐Rivera, María, Nonell, Lara, Altadill, Mireia, Puigdecanet, Eulàlia, Arnal, Magdalena, Calvo, Xavier, Gimeno, Eva, Abella, Eugènia, Abrisqueta, Pau, Bosch, Francesc, Yélamos, José, Ferrer, Ana, López‐Botet, Miguel, Espinet, Blanca

Source: International journal of laboratory hematology. 43(5):1032-1040

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100131467729.0x000001&indx=1&recIds=ETOCvdc_100131467729.0x000001

Oral premalignant lesions of smokers and non‐smokers show similar carcinogenic pathways and outcomes. A clinicopathological and molecular comparative analysis

Authors: Oliva, Jorge, Larque, Ana‐Belen, Marti, Carles, Bodalo‐Torruella, Marta, Nonell, Lara, Nadal, Alfons, Castillo, Paola, Sieira, Ramón, Ferrer, Ada, Garcia‐Diez, Eloy, Alos, Llucia

Source: Journal of oral pathology & medicine. 50(3):280-286

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100116958742.0x000001&indx=1&recIds=ETOCvdc_100116958742.0x000001

SPOP and CHD1 alterations in prostate cancer: Relationship with PTEN loss, tumor grade, perineural infiltration, and PSA recurrence

Authors: Hernández‐Llodrà, Silvia, Segalés, Laura, Juanpere, Nuria, Marta Lorenzo, Tech, Salido, Marta, Nonell, Lara, David López, Tech, Rodríguez‐Vida, Alejo, Bellmunt, Joaquim, Fumadó, Lluís, Cecchini, Lluís, Lloreta‐Trull, Josep

Source: Prostate. 81(16):1267-1277

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100134767419.0x000001&indx=1&recIds=ETOCvdc_100134767419.0x000001

Genomics reveal local skin immune response key to control sarcoptic mange in Iberian ibex (Capra pyrenaica).

Authors: Ráez-Bravo, Arián, Granados, José Enrique, Espinosa, José, Nonell, Lara, Serrano, Emmanuel, Puigdecanet, Eulàlia, Bódalo, Marta, Pérez, Jesús M., Soriguer, Ramón C., Cano-Manuel, Francisco Javier, Fandos, Paulino, López-Olvera, Jorge Ramón

Source: BMC Genomics; 11/27/2024, Vol. 25 Issue 1, p1-14, 14p

Subject Terms: SARCOPTES scabiei, GENE expression, GENOMICS, TREATMENT effectiveness, DOMESTIC animals, SCABIES

Epigenetic footprint enables molecular risk stratification of hepatoblastoma with clinical implications

Authors: Carrillo-Reixach, Juan, Torrens, Laura, Simon-Coma, Marina, Royo, Laura, Domingo-Sàbat, Montserrat, Abril-Fornaguera, Jordi, Akers, Nicholas, Sala, Margarita, Ragull, Sonia, Arnal, Magdalena, Villalmanzo, Núria, Cairo, Stefano, Villanueva, Alberto, Kappler, Roland, Garrido, Marta, Guerra, Laura, Sábado, Constantino, Guillén, Gabriela, Mallo, Mar, Piñeyro, David, Vázquez-Vitali, María, Kuchuk, Olga, Mateos, María Elena, Ramírez, Gema, Santamaría, Manuel López, Mozo, Yasmina, Soriano, Aroa, Grotzer, Michael, Branchereau, Sophie, de Andoin, Nagore García, López-Ibor, Blanca, López-Almaraz, Ricardo, Salinas, José Antonio, Torres, Bárbara, Hernández, Francisco, Uriz, José Javier, Fabre, Monique, Blanco, Julià, Paris, Claudia, Bajčiová, Viera, Laureys, Geneviève, Masnou, Helena, Clos, Ariadna, Belendez, Cristina, Guettier, Catherine, Sumoy, Lauro, Planas, Ramón, Jordà, Mireia, Nonell, Lara, Czauderna, Piotr, Morland, Bruce, Sia, Daniela, Losic, Bojan, Buendia, Marie Annick, Sarrias, Maria Rosa, Llovet, Josep M., Armengol, Carolina

Source: In Journal of Hepatology August 2020 73(2):328-341

Circulating tumor extracellular vesicles to monitor metastatic prostate cancer genomics and transcriptomic evolution

Authors: Casanova-Salas, Irene ¹, Aguilar, Daniel ^{1, 6}, Cordoba-Terreros, Sarai ^{1, 6}, Agundez, Laura ¹, Brandariz, Julian ¹, Herranz, Nicolas ^{1, 2}, Mas, Alba ¹, Gonzalez, Macarena ^{1, 3}, Morales-Barrera, Rafael ^{1, 3}, Sierra, Alexandre ^{1, 3}, Soriano-Navarro, Mario ⁴, Cresta, Pablo ¹, Mir, Gisela ¹, Simonetti, Sara ¹, Rodrigues, Gonçalo ¹, Arce-Gallego, Sara ^{1, 2}, Delgado-Serrano, Luisa ¹, Agustí, Irene ¹, Castellano-Sanz, Elena ⁵, Mast, Richard ³, de Albert, Matias ³, Celma, Ana ^{2, 3}, Santamaria, Anna ^{2, 3}, Gonzalez, Lucila ¹, Castro, Natalia ¹, Suanes, Maria del Mar ^{1, 3}, Hernández-Losa, Javier ^{2, 3}, Nonell, Lara ¹, Peinado, Hector ⁵, Carles, Joan ^{1, 3}, Mateo, Joaquin ^{1, 3, 7, ∗}

Source: In Cancer Cell 8 July 2024 42(7):1301-1312

The acute effects of ultraviolet radiation on the blood transcriptome are independent of plasma 25OHD3

Authors: Bustamante, Mariona, Hernandez-Ferrer, Carles, Sarria, Yaris, Harrison, Graham I., Nonell, Lara, Kang, Wenjing, Friedländer, Marc R., Estivill, Xavier, González, Juan R., Nieuwenhuijsen, Mark, Young, Antony R.

Source: In Environmental Research November 2017 159:239-248

FOXO1 down-regulation is associated with worse outcome in bladder cancer and adds significant prognostic information to p53 overexpression

Authors: Lloreta, Josep, Font-Tello, Alba, Juanpere, Núria, Frances, Albert, Lorenzo, Marta, Nonell, Lara, de Muga, Silvia, Vázquez, Ivonne, Cecchini, Lluís, Hernández-Llodrà, Silvia

Source: In Human Pathology April 2017 62:222-231

Lamin B1 mapping reveals the existence of dynamic and functional euchromatin lamin B1 domains

Authors: Pascual-Reguant, Laura, Blanco, Enrique, Galan, Silvia, Dily, François, Cuartero, Yasmina, Serra-Bardenys, Gemma, Carlo, Valerio, Iturbide, Ane, Cebrià-Costa, Joan, Nonell, Lara, Herreros, Antonio, Croce, Luciano, Marti-Renom, Marc, Peiró, Sandra

Source: Nature communications. 9(1):1-12

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100178113631.0x000001&indx=1&recIds=ETOCvdc_100178113631.0x000001

MicroRNA Expression Profiling and DNA Methylation Signature for Deregulated MicroRNA in Cutaneous T-Cell Lymphoma

Authors: Sandoval, Juan ^*, Díaz-Lagares, Angel, Salgado, Rocío, Servitje, Octavio, Climent, Fina, Ortiz-Romero, Pablo L., Pérez-Ferriols, Amparo, Garcia-Muret, Maria P., Estrach, Teresa, Garcia, Mar, Nonell, Lara, Esteller, Manel, Pujol, Ramon M., Espinet, Blanca, Gallardo, Fernando ^*

Source: In Journal of Investigative Dermatology April 2015 135(4):1128-1137

MiR-24-3p regulates CDX2 during intestinalization of cardiac-type epithelium in a human model of Barrett's esophagus

Authors: Gil-Gómez, Gabriel, Fassan, Matteo, Nonell, Lara, Garrido, Marta, Climent, Marta, Anglada, Roger, Iglesias, Mar, Guzzardo, Vicenza, Borga, Chiara, Grande, Luis, de Bolós, Carme, Pera, Manuel

Source: Diseases of the esophagus. 34(7)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100132494510.0x000001&indx=1&recIds=ETOCvdc_100132494510.0x000001

Defining quantification methods and optimizing protocols for microarray hybridization of circulating microRNAs

Authors: Garcia-Elias, Anna, Alloza, Leonor, Puigdecanet, Eulàlia, Nonell, Lara, Tajes, Marta, Curado, Joao, Enjuanes, Cristina, Díaz, Oscar, Bruguera, Jordi, Martí-Almor, Julio, Comín-Colet, Josep, Benito, Begoña

Source: Scientific reports. 7(1):1-14

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100174882032.0x000001&indx=1&recIds=ETOCvdc_100174882032.0x000001

LMO2-negative Expression Predicts the Presence of MYC Translocations in Aggressive B-Cell Lymphomas

Authors: Colomo, Luis, Vazquez, Ivonne, Papaleo, Natalia, Espinet, Blanca, Ferrer, Anna, Franco, Catalina, Comerma, Laura, Hernandez, Silvia, Calvo, Xavier, Salar, Antonio, Climent, Fina, Mate, José Luis, Forcada, Pilar, Mozos, Anna, Nonell, Lara, Martinez, Antonio, Carrio, Anna, Costa, Dolors, Dlouhy, Ivan, Salaverria, Itziar, Martin-Subero, Jose Ignacio, Lopez-Guillermo, Armando, Valera, Alexandra, Campo, Elias

Source: American journal of surgical pathology. 41(7):877-886

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100044953699.0x000001&indx=1&recIds=ETOCvdc_100044953699.0x000001