A deep learning framework for efficient pathology image analysis

Authors: Neidlinger, Peter, Lenz, Tim, Foersch, Sebastian, Loeffler, Chiara M. L., Clusmann, Jan, Gustav, Marco, Shaktah, Lawrence A., Langer, Rupert, Dislich, Bastian, Boardman, Lisa A., French, Amy J., Goode, Ellen L., Gsur, Andrea, Brezina, Stefanie, Gunter, Marc J., Steinfelder, Robert, Behrens, Hans-Michael, Röcken, Christoph, Harrison, Tabitha, Peters, Ulrike, Phipps, Amanda I., Curigliano, Giuseppe, Fusco, Nicola, Marra, Antonio, Hoffmeister, Michael, Brenner, Hermann, Kather, Jakob Nikolas

Subject Terms: Computer Science - Computer Vision and Pattern Recognition

Access URL: http://arxiv.org/abs/2502.13027

Unsupervised Foundation Model-Agnostic Slide-Level Representation Learning

Authors: Lenz, Tim, Neidlinger, Peter, Ligero, Marta, Wölflein, Georg, van Treeck, Marko, Kather, Jakob Nikolas

Subject Terms: Computer Science - Computer Vision and Pattern Recognition

Access URL: http://arxiv.org/abs/2411.13623

Benchmarking foundation models as feature extractors for weakly-supervised computational pathology

Authors: Neidlinger, Peter, Nahhas, Omar S. M. El, Muti, Hannah Sophie, Lenz, Tim, Hoffmeister, Michael, Brenner, Hermann, van Treeck, Marko, Langer, Rupert, Dislich, Bastian, Behrens, Hans Michael, Röcken, Christoph, Foersch, Sebastian, Truhn, Daniel, Marra, Antonio, Saldanha, Oliver Lester, Kather, Jakob Nikolas

Subject Terms: Electrical Engineering and Systems Science - Image and Video Processing, Computer Science - Computer Vision and Pattern Recognition

Access URL: http://arxiv.org/abs/2408.15823

End-To-End Clinical Trial Matching with Large Language Models

Authors: Ferber, Dyke, Hilgers, Lars, Wiest, Isabella C., Leßmann, Marie-Elisabeth, Clusmann, Jan, Neidlinger, Peter, Zhu, Jiefu, Wölflein, Georg, Lammert, Jacqueline, Tschochohei, Maximilian, Böhme, Heiko, Jäger, Dirk, Aldea, Mihaela, Truhn, Daniel, Höper, Christiane, Kather, Jakob Nikolas

Subject Terms: Computer Science - Computation and Language, Computer Science - Artificial Intelligence

Access URL: http://arxiv.org/abs/2407.13463

Sa1751 THE ATP CITRATE LYASE (ACLY) AS AN IMMUNOMETABOLIC TARGET TO THERAPEUTICALLY MODULATE THE COLITOGENIC CAPACITY OF INTESTINAL T CELLS IN IBD

Authors: Schulz-Kuhnt, Anja, Rühle, Katharina, Döbrönti, Michael, Neidlinger, Peter, Knittel, Selina, Leupold, Jannik, Biwank, Jana, Taudte, R. Verena, Gessner, Arne, Fromm, Martin F., Mielenz, Dirk, Kreiß, Lucas, Waldner, Maximilian, Dietel, Barbara, Becker, Christoph, Zundler, Sebastian, Atreya, Raja, Neurath, Markus, Atreya, Imke

Source: Gastroenterology. 164(6):S-416-S-417

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100194413458.0x000001&indx=1&recIds=ETOCvdc_100194413458.0x000001

ATP citrate lyase (ACLY)-dependent immunometabolism in mucosal T cells drives experimental colitis in vivo.

Authors: Schulz-Kuhnt, Anja, Rühle, Katharina, Javidmehr, Asal, Döbrönti, Michael, Biwank, Jana, Knittel, Selina, Neidlinger, Peter, Leupold, Jannik, Li-Juan Liu, Dedden, Mark, Taudte, Regina Verena, Gessner, Arne, Fromm, Martin F., Mielenz, Dirk, Kreiss, Lucas, Waldner, Maximilian J., Schürmann, Sebastian, Friedrich, Oliver, Dietel, Barbara, López-Posadas, Rocío

Source: Gut; Apr2024, Vol. 73 Issue 4, p601-612, 26p