Molecular Dynamics Simulations and Analysis for Bioinformatics Undergraduate Students

Authors: Justino, Gonçalo C. (ORCID 0000-0003-4828-4738), Nascimento, Catarina P., Justino, Marta C.

Source: Biochemistry and Molecular Biology Education. Jul-Aug 2021 49(4):570-582.

Peer Reviewed: Y

Page Count: 13

Descriptors: Molecular Biology, Biochemistry, Information Science, Science Laboratories, Computer Simulation, Programming, Skill Development, Group Activities, Critical Thinking, Undergraduate Students

Tumor microenvironment of human breast cancer, and feline mammary carcinoma as a potential study model

Authors: Nascimento, Catarina, Ferreira, Fernando

Source: In BBA - Reviews on Cancer August 2021 1876(1)

Impact of margin thermal ablation after endoscopic mucosal resection of large (≥20 mm) non-pedunculated colonic polyps on long-term recurrence.

Authors: O'Sullivan, Timothy, Mandarino, Francesco Vito, Gauci, Julia L., Whitfield, Anthony M., Kerrison, Clarence, Elhindi, James, Neto do Nascimento, Catarina, Gupta, Sunil, Cronin, Oliver, Sakiris, Anthony, Prieto Aparicio, Juan Francisco, Arndtz, Sophie, Brown, Gregor, Raftopoulos, Spiro, Tate, David, Lee, Eric Y., Williams, Stephen J., Burgess, Nicholas, Bourke, Michael J.

Source: Gut; Jan2025, Vol. 74 Issue 1, p67-74, 8p

Subject Terms: ENDOSCOPIC surgery, SURGICAL anastomosis, MEDICAL care, PATIENT compliance, SURGICAL margin, POLYPECTOMY, PEER review of students

Impact of margin thermal ablation after endoscopic mucosal resection of large (≥20 mm) non-pedunculated colonic polyps on long-term recurrence

Authors: O’Sullivan, Timothy, Mandarino, Francesco Vito, Gauci, Julia L, Whitfield, Anthony M, Kerrison, Clarence, Elhindi, James, Neto do Nascimento, Catarina, Gupta, Sunil, Cronin, Oliver, Sakiris, Anthony, Prieto Aparicio, Juan Francisco, Arndtz, Sophie, Brown, Gregor, Raftopoulos, Spiro, Tate, David, Lee, Eric Y, Williams, Stephen J, Burgess, Nicholas, Bourke, Michael J

Source: Gut; 2025, Vol. 74 Issue: 1 p67-74, 8p

Steroid-Refractory Acute Severe Ulcerative Colitis in Infliximab-Experienced Patients.

Authors: Revés, Joana, Bravo, Ana Catarina, Nascimento, Catarina Neto, Morão, Bárbara, Frias-Gomes, Catarina, Roque Ramos, Lídia, Glória, Luísa, Torres, Joana, Palmela, Carolina

Source: GE Portuguese Journal of Gastroenterology; 2024, Vol. 31 Issue 5, p314-324, 11p

TIM-3 Is a Potential Immune Checkpoint Target in Cats with Mammary Carcinoma.

Authors: Valente, Sofia^1,2 (AUTHOR), Nascimento, Catarina^1,2 (AUTHOR), Gameiro, Andreia^1,2 (AUTHOR), Ferreira, João³ (AUTHOR), Correia, Jorge^1,2 (AUTHOR), Ferreira, Fernando^1,2 (AUTHOR) fernandof@fmv.ulisboa.pt

Source: Cancers. Jan2023, Vol. 15 Issue 2, p384. 15p.

Subject Terms: *IMMUNE checkpoint inhibitors, *GENETIC mutation, *ANIMAL experimentation, *IMMUNOHISTOCHEMISTRY, *CATS, *MEMBRANE glycoproteins, *TREATMENT effectiveness, *GENE expression, *ENZYME-linked immunosorbent assay, *DESCRIPTIVE statistics, *RESEARCH funding, *T cells, *TUMOR markers, *BREAST tumors, *IMMUNOTHERAPY, *PHARMACODYNAMICS

EBV and MSI Status in Gastric Cancer: Does It Matter?

Authors: do Nascimento, Catarina Neto¹ (AUTHOR), Mascarenhas-Lemos, Luís^2,3,4 (AUTHOR), Silva, João Ricardo⁵ (AUTHOR), Marques, Diogo Sousa⁵ (AUTHOR), Gouveia, Catarina Ferreira¹ (AUTHOR), Faria, Ana⁶ (AUTHOR), Velho, Sónia⁷ (AUTHOR), Garrido, Rita⁸ (AUTHOR), Maio, Rui^8,9 (AUTHOR), Costa, Andreia¹⁰ (AUTHOR), Pontes, Patrícia¹¹ (AUTHOR), Wen, Xiaogang^12,13 (AUTHOR), Gullo, Irene^5,11,12 (AUTHOR), Cravo, Marília^14,15 (AUTHOR), Carneiro, Fátima^5,11,12 (AUTHOR) fcarneiro@ipatimup.pt

Source: Cancers. Jan2023, Vol. 15 Issue 1, p74. 17p.

Subject Terms: *STOMACH tumors, *PERIOPERATIVE care, *PATHOGENESIS, *CANCER chemotherapy, *MULTIVARIATE analysis, *RNA, *LYMPH nodes, *SEX distribution, *EPSTEIN-Barr virus, *DESCRIPTIVE statistics, *RESEARCH funding, *PROGRESSION-free survival

The Landscape of Tumor-Infiltrating Immune Cells in Feline Mammary Carcinoma: Pathological and Clinical Implications.

Authors: Nascimento, Catarina^1,2 (AUTHOR), Gameiro, Andreia^1,2 (AUTHOR), Correia, Jorge^1,2 (AUTHOR), Ferreira, João³ (AUTHOR), Ferreira, Fernando^1,2 (AUTHOR) fernandof@fmv.ulisboa.pt

Source: Cells (2073-4409). Aug2022, Vol. 11 Issue 16, p2578. 12p.

Subject Terms: *TUMOR-infiltrating immune cells, *CAT diseases, *PROGNOSIS, *CARCINOMA, *PROGRESSION-free survival, *BREAST cancer

Comparison between tofacitinib and ustekinumab as a third‐line therapy in refractory ulcerative colitis: A multicenter international study

Authors: Allocca, Mariangela, Catalano, Gaia, Savarino, Edoardo V., Chaparro, María, Levartovsky, Asaf, Michalopoulos, George, Viazis, Nikos, Fousekis, Fotis S., Psistakis, Andreas, Noviello, Daniele, Nascimento, Catarina Neto do, Caron, Benedicte, Kitsou, Vassiliki, Bamias, Giorgos, García, María José, Zacharopoulou, Eirini, Foteinogiannopoulou, Kalliopi, D'Amico, Ferdinando, Koutroubakis, Ioannis, Ellul, Pierre, Tzouvala, Maria, Peyrin‐Biroulet, Laurent, Torres, Joana, Caprioli, Flavio, Karmiris, Konstantinos, Theodoropoulou, Angeliki, Katsanos, Konstantinos H., Christodoulou, Dimitrios K., Mantzaris, Gerassimos J., Kopylov, Uri, Gisbert, Javier P., Danese, Silvio, Magro, Fernando, Carla, Fornari, Fiorino, Gionata

Source: United European Gastroenterology Journal; June 2024, Vol. 12 Issue: 5 p543-551, 9p

Quality of death in patients in advanced chronic liver disease and cancer patients managed by gastroenterologists in Portugal: are we doing it right?

Authors: Nascimento, Catarina Neto do, Bravo, Ana Catarina, Canhoto, Manuela, Glória, Luísa, Fidalgo, Catarina Andrade

Source: European Journal of Gastroenterology & Hepatology; Feb2024, Vol. 36 Issue 2, p197-202, 6p

Early intervention with biologic therapy in Crohn´s disease: how early is early?

Authors: Revés, Joana, Mascarenhas, André, Temido, Maria José, Morão, Bárbara, Nascimento, Catarina Neto, Franco, Ana Rita, Mendes, Raquel R, Palmela, Carolina, Chagas, Cristina, Figueiredo, Pedro Narra, Glória, Luísa, Portela, Francisco, Torres, Joana

Source: Journal of Crohn's & Colitis; Nov2023, Vol. 17 Issue 11, p1752-1760, 9p

Secondary Sclerosing Cholangitis in a Critically Ill Patient with Severe SARS-CoV-2 Infection: A Possibly Emergent Entity during the Current Global Pandemic.

Authors: Morão, Bárbara, Revés, Joana Branco, Nascimento, Catarina, Loureiro, Rui, Glória, Luísa, Palmela, Carolina

Source: GE Portuguese Journal of Gastroenterology; 2023 Suppl 2, Vol. 30 Issue 2, p11-16, 6p

Groove Pancreatitis: Clinical Cases and Review of the Literature.

Authors: Neto do Nascimento, Catarina, Palmela, Carolina, Soares, António Sampaio, Antunes, Maria Lobo, Fidalgo, Catarina Andrade, Glória, Luísa

Source: GE Portuguese Journal of Gastroenterology; 2023, Vol. 30 Issue 6, p437-443, 7p

Performance of Immunohistochemical and Molecular Methods in Detecting Microsatellite Instability in Gastric Cancer: A Multicenter Study.

Authors: Sousa Marques, Diogo, Gullo, Irene, Mascarenhas-Lemos, Luís, Silva, João Ricardo, Neto do Nascimento, Catarina, Pontes, Patrícia, Pinho, Lídia, Cirnes, Luis, Wen, Xiaogang, Cravo, Marília, Carneiro, Fátima

Source: Pathobiology; 2023, Vol. 90 Issue 6, p389-399, 11p

Narrow Band Imaging versus White Light for the Detection of Sessile Serrated Colorectal Lesions: A Randomized Clinical Trial.

Authors: Ferreira, Alexandre Oliveira, Reves, Joana Branco, Nascimento, Catarina, Frias-Gomes, Catarina, Costa-Santos, Maria Pia, Ramos, Lídia Roque, Palmela, Carolina, Gloria, Luísa, Cravo, Marília, Dinis-Ribeiro, Mário, Canena, Jorge

Source: GE Portuguese Journal of Gastroenterology; 2023, Vol. 30 Issue 5, p368-374, 7p

Role of Endoscopic Biopsies and Morphologic Features in Predicting Microsatellite Instability Status in Gastric Cancer: A Multicenter Comparative Study of Endoscopic Biopsies and Surgical Specimens.

Authors: Silva, João R., Mascarenhas-Lemos, Luís, Neto do Nascimento, Catarina, Sousa Marques, Diogo, Xiaogang Wen, Pinho, Lídia, Rui Maio, Pontes, Patrícia, Cirnes, Luís, Cravo, Marília, Carneiro, Fátima, Gullo, Irene

Source: American Journal of Surgical Pathology; Sep2023, Vol. 47 Issue 9, p990-1000, 11p

Clinical Relevance of the serum CTLA-4 in Cats with Mammary Carcinoma.

Authors: Urbano, Ana Catarina¹ (AUTHOR), Nascimento, Catarina¹ (AUTHOR), Soares, Maria² (AUTHOR), Correia, Jorge¹ (AUTHOR), Ferreira, Fernando¹ (AUTHOR) fernandof@fmv.ulisboa.pt

Source: Scientific Reports. 3/2/2020, Vol. 10 Issue 1, p1-11. 11p.

Subject Terms: *SERUM, *CELL-mediated cytotoxicity, *IMMUNOTHERAPY, *ENZYME-linked immunosorbent assay, *LYMPHOCYTES

Colorectal Endoscopic Full-Thickness Resection: A Portuguese Multicenter Experience Based on a Retrospective Cohort

Authors: Mendes, Raquel R., Mascarenhas, André, Correia, João, Estevinho, Maria Manuela, Pereira Rodrigues, Jaime, Conceição, Daniel, Saraiva, Sofia, Mão De Ferro, Susana, Nascimento, Catarina Neto, Loureiro, Rui, Costa, Mara Sarmento, Gravito-Soares, Elisa, Chaves, Jéssica, Libânio, Diogo, Dinis Ribeiro, Mário, Archer, Sara, Küttner Magalhães, Ricardo, Bronze, Sérgio, Noronha Ferreira, Carlos, Tarrio, Isabel, Araújo, Tarcísio, Barreiro, Pedro

Source: GE - Portuguese Journal of Gastroenterology (Karger); 20240101, Issue: Preprints p1-9, 9p

Prediction of Hepatocellular Carcinoma in a Portuguese Population after Hepatitis C Cure: Comparative Accuracy of Noninvasive Tests (Transient Elastography, FIB-4, and aMAP)

Authors: Mascarenhas, André, Serrazina, Juliana, Bronze, Sérgio, Cortez-Pinto, Helena, Presa, José, Barreira, Ana, Carrola, Paulo, Vara-Luiz, Francisco, Rosu-Pires, Alexandra, Martins, Pedro Lages, Prata, Rita, Revés, Joana, Bravo, Catarina, Nascimento, Catarina, Gouveia, Catarina, Franco, Ana Rita, Lima, Pedro, O’Neill, Catarina, Mendes, Raquel R., Simão, Inês Rodrigues, Santos, Inês Costa, Gonçalves, André Ruge, Barreiro, Pedro, Mendo, Rui, Barosa, Rita, Figueiredo, Pedro, Chagas, Cristina

Source: GE - Portuguese Journal of Gastroenterology (Karger); 20240101, Issue: Preprints p1-13, 13p

Sa1809 INTESTINAL ULTRASOUND CORRELATES WITH CLINICAL, BIOCHEMICAL, ENDOSCOPIC AND HISTOLOGIC BIOMARKERS IN PATIENTS WITH ULCERATIVE COLITIS: A CROSS-SECTIONAL STUDY

Authors: Bravo, Ana Catarina, Revés, Joana, Nascimento, Catarina N., Abreu, Bárbara S., Bargas, André, Bragança, Sofia, Rafael, Maria Ana, Estevinho, Maria Manuela, Silva, João, Borralho, Paula, Glória, Luísa M., Ramos, Lídia M. Roque, Palmela, Carolina, Torres, Joana, Gomes, Catarina F.

Source: In Gastroenterology 18-21 May 2024 166(5) Supplement:S