Dynamics simulations of hypoxia inducible factor-1 regulatory network in cancer using formal verification techniques

Authors: Hafiz Muhammad Faraz Azhar, Muhammad Tariq Saeed, Ishrat Jabeen

Source: Frontiers in Molecular Biosciences, Vol 11 (2024)

Subject Terms: hypoxia-inducible factor-1 (HIF-1), vascular endothelial growth factor (VEGF), oglycosylation transferase (OGT), glucose transporter-1 (GLUT-1), extracellular single regulated kinase (ERK), cellular myelocytomatosis oncogene (C-MYC), Biology (General), QH301-705.5

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Relation: https://www.frontiersin.org/articles/10.3389/fmolb.2024.1386930/full; https://doaj.org/toc/2296-889X

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Application of chitosan‐based chickpea (Cicer arietinum L.) hull polysaccharides edible coating on cherry tomatoes preservation

Authors: Hafiz Muhammad Saleem Akhtar, Tawaf Ali Shah, Yahya Saud Hamed, Mohamed Abdin, Samee Ullah, Faryal Shaukat, Zunair Abdullah, Muhammad Tariq Saeed

Source: eFood, Vol 5, Iss 1, Pp n/a-n/a (2024)

Subject Terms: cherry tomatoes preservation, chickpea hull polysaccharides, chitosan, edible coating, Food processing and manufacture, TP368-456, Toxicology. Poisons, RA1190-1270

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Relation: https://doaj.org/toc/2666-3066

Access URL: https://doaj.org/article/80458561f6a740bcad3845133b8cb636

Removal of congo red from water by adsorption onto activated carbon derived from waste black cardamom peels and machine learning modeling

Authors: Rameez Ahmad Aftab, Sadaf Zaidi, Aftab Aslam Parwaz Khan, Mohd Arish Usman, Anees Y. Khan, Muhammad Tariq Saeed Chani, Abdullah M. Asiri

Source: Alexandria Engineering Journal, Vol 71, Iss , Pp 355-369 (2023)

Subject Terms: Black cardamom, Activated carbon, Machine learning modeling, Support vector regression, Langmuir isotherm, Engineering (General). Civil engineering (General), TA1-2040

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Relation: http://www.sciencedirect.com/science/article/pii/S1110016823002259; https://doaj.org/toc/1110-0168

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Modelling and analysis of the complement system signalling pathways: roles of C3, C5a and pro-inflammatory cytokines in SARS-CoV-2 infection

Authors: Didar Murad, Rehan Zafar Paracha, Muhammad Tariq Saeed, Jamil Ahmad, Ammar Mushtaq, Maleeha Humayun

Source: PeerJ, Vol 11, p e15794 (2023)

Subject Terms: Qualitative modelling, René Thomas, Biological regulatory network (BRN), Model checker (NuSMV), SMBioNet, Complement system, Medicine, Biology (General), QH301-705.5

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Relation: https://peerj.com/articles/15794.pdf; https://peerj.com/articles/15794/; https://doaj.org/toc/2167-8359

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Fabrication and Investigation of Deformable Rubber–Carbon Nanotube–Glue Gel-Based Impedimetric and Capacitive Tactile Sensors for Pressure and Displacement Measurements

Authors: Khasan S. Karimov, Muhammad Tariq Saeed Chani, Tahseen Kamal, Syed Zameer Abbas, Naved Azum, Abdullah Mohamed Asiri

Source: Gels, Vol 10, Iss 1, p 76 (2024)

Subject Terms: carbon nanotube–glue composite gel, tactile pressure, capacitive sensing, impedimetric sensing, frequency, Science, Chemistry, QD1-999, Inorganic chemistry, QD146-197, General. Including alchemy, QD1-65

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Relation: https://www.mdpi.com/2310-2861/10/1/76; https://doaj.org/toc/2310-2861

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Multifunctional tri-electrode sensors for the measurement of displacement, force, and infrared irradiation

Authors: Muhammad Tariq Saeed Chani, Khasan S Karimov, Noshin Fatima, Khalid Ahmed Alzahrani, Tahseen Kamal, Mohamed A Abdel-Fadeel, Hadi M Marwani

Source: Materials Research Express, Vol 11, Iss 10, p 105101 (2024)

Subject Terms: organic oil, shockproof devices, environmentally friendly fabrication, uniform gel-films, gel-based electronics, Materials of engineering and construction. Mechanics of materials, TA401-492, Chemical technology, TP1-1185

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Relation: https://doaj.org/toc/2053-1591

Access URL: https://doaj.org/article/7dc351f7cddf444ab786f9ebd4ed0fb4

Enhancement of sensory attributes and mineral content of Sourdough bread by means of microbial culture and yeast (Saccharomyces Cerevisiae)

Authors: Anam Zahra, Umar Farooq, Muhammad Tariq Saeed, Muhammad Yousaf Quddoos, Amna Hameed, Madiha Iftikhar, Amna Noreen, Syeda Mahvish Zahra, Ashiq Hussain, Syeda Ramsha Bukhari, Ayesha Rafique, Syeda Nimra Naqvi, Faiqa Chaudhry

Source: Food Chemistry Advances, Vol 1, Iss , Pp 100094- (2022)

Subject Terms: Fermentation: Sensory characteristics, Sourdough bread, Microbiota, Nine-point scales, Lactic acid bacteria, Food processing and manufacture, TP368-456

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Relation: http://www.sciencedirect.com/science/article/pii/S2772753X2200082X; https://doaj.org/toc/2772-753X

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Orange Dye and Silicone Glue Composite Gel-Based Optimized Impedimetric and Capacitive Surface-Type Proximity Sensors

Authors: Khasan S. Karimov, Muhammad Tariq Saeed Chani, Noshin Fatima, Abdullah M. Asiri, Mohammed M. Rahman

Source: Gels, Vol 9, Iss 9, p 721 (2023)

Subject Terms: frequency response, high resolution, orange dye, silicone glue, rubbing-in technology, Science, Chemistry, QD1-999, Inorganic chemistry, QD146-197, General. Including alchemy, QD1-65

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Relation: https://www.mdpi.com/2310-2861/9/9/721; https://doaj.org/toc/2310-2861

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System level modeling and analysis of TNF-α mediated sphingolipid signaling pathway in neurological disorders for the prediction of therapeutic targets

Authors: Sanam Banaras, Rehan Zafar Paracha, Maryum Nisar, Ayesha Arif, Jamil Ahmad, Muhammad Tariq Saeed, Zartasha Mustansar, Malik Nawaz Shuja, Rizwan Nasir Paracha

Source: Frontiers in Physiology, Vol 13 (2022)

Subject Terms: neurological disorders, neurons, microglia, TNF-α, sphingomyelin, network analysis, Physiology, QP1-981

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Relation: https://www.frontiersin.org/articles/10.3389/fphys.2022.872421/full; https://doaj.org/toc/1664-042X

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Decoding the Role of Epigenetics in Breast Cancer Using Formal Modeling and Machine-Learning Methods

Authors: Ayesha Asim, Yusra Sajid Kiani, Muhammad Tariq Saeed, Ishrat Jabeen

Source: Frontiers in Molecular Biosciences, Vol 9 (2022)

Subject Terms: RUNX3 signaling pathway, Dnmt1, machine learning, qualitative modeling, c-myc, SMBioNet, Biology (General), QH301-705.5

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Relation: https://www.frontiersin.org/articles/10.3389/fmolb.2022.882738/full; https://doaj.org/toc/2296-889X

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Sunlight assisted photocatalytic dye degradation using zinc and iron based mixed metal-oxides nanopowders

Authors: Muhammad Tariq Saeed Chani, Sher Bahadar Khan, Mohammed M. Rahman, Tahseen Kamal, Abdullah M. Asiri

Source: Journal of King Saud University: Science, Vol 34, Iss 3, Pp 101841- (2022)

Subject Terms: Low temperature synthesis, Photo-catalytic purification, Materials characterization, Water pollutants, Sunlight, Water filter, Science (General), Q1-390

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Relation: http://www.sciencedirect.com/science/article/pii/S1018364722000222; https://doaj.org/toc/1018-3647

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Formal model of the interplay between TGF-β1 and MMP-9 and their dynamics in hepatocellular carcinoma

Authors: Shifa Tariq Ashraf, Ayesha Obaid, Muhammad Tariq Saeed, Anam Naz, Fatima Shahid, Jamil Ahmad, Amjad Ali

Source: Mathematical Biosciences and Engineering, Vol 16, Iss 5, Pp 3285-3310 (2019)

Subject Terms: tgf-β1, mmp-9, hcc, qualitative modeling, petri nets, Biotechnology, TP248.13-248.65, Mathematics, QA1-939

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Relation: https://www.aimspress.com/article/10.3934/mbe.2019164?viewType=HTML; https://doaj.org/toc/1551-0018

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Effect of Vibrations, Displacement, Pressure, Temperature and Humidity on the Resistance and Impedance of the Shockproof Resistors Based on Rubber and Jelly (NiPc–CNT–Oil) Composites

Authors: Muhammad Tariq Saeed Chani, Khasan S. Karimov, Abdullah M. Asiri, Mohammed M. Rahman, Tahseen Kamal

Source: Gels, Vol 8, Iss 4, p 226 (2022)

Subject Terms: resistor, organic semiconductor, nickel phthalocyanine, edible oil, flexible devices, Science, Chemistry, QD1-999, Inorganic chemistry, QD146-197, General. Including alchemy, QD1-65

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Relation: https://www.mdpi.com/2310-2861/8/4/226; https://doaj.org/toc/2310-2861

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A Map-Based Recommendation System and House Price Prediction Model for Real Estate

Authors: Maryam Mubarak, Ali Tahir, Fizza Waqar, Ibraheem Haneef, Gavin McArdle, Michela Bertolotto, Muhammad Tariq Saeed

Source: ISPRS International Journal of Geo-Information, Vol 11, Iss 3, p 178 (2022)

Subject Terms: real estate, map personalisation, map recommendation, house price prediction, estatech maps, real estate analytics, Geography (General), G1-922

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Relation: https://www.mdpi.com/2220-9964/11/3/178; https://doaj.org/toc/2220-9964

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Effect of Humidity and Temperature on the Impedances and Voltage of Al/Gr-Jelly/Cu-Rubber Composite-Based Flexible Electrochemical Sensors

Authors: Muhammad Tariq Saeed Chani, Khasan S. Karimov, Esraa M. Bakhsh, Mohammed M. Rahman

Source: Gels, Vol 8, Iss 2, p 73 (2022)

Subject Terms: graphene, jelly, superabsorbent polymers, graphene–jelly electrolyte composite, shockproof flexible sensor, drop casting, Science, Chemistry, QD1-999, Inorganic chemistry, QD146-197, General. Including alchemy, QD1-65

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Relation: https://www.mdpi.com/2310-2861/8/2/73; https://doaj.org/toc/2310-2861

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Preparation, Characterization, and Biological Features of Cactus Coated Bacterial Cellulose Hydrogels

Authors: Tahseen Kamal, Mazhar Ul-Islam, Sher Bahadar Khan, Esraa M. Bakhsh, Muhammad Tariq Saeed Chani

Source: Gels, Vol 8, Iss 2, p 88 (2022)

Subject Terms: bacterial cellulose, adsorption, cactus composite, mechanical properties, biocompatibility, Science, Chemistry, QD1-999, Inorganic chemistry, QD146-197, General. Including alchemy, QD1-65

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Relation: https://www.mdpi.com/2310-2861/8/2/88; https://doaj.org/toc/2310-2861

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Ultraviolet and Infrared Irradiations Sensing of Gel-Orange Dye Composite-Based Flexible Electrochemical Cells

Authors: Muhammad Tariq Saeed Chani, Khasan S. Karimov, Abdullah M. Asiri, Tahseen Kamal, Esraa M. Bakhsh, Mohammed Muzibur Rahman

Source: Gels, Vol 8, Iss 2, p 83 (2022)

Subject Terms: electrochemical cell, gel electronics, ultraviolet and infrared irradiation sensing, organic semiconductor, flexible and shockproof devices, impedance, Science, Chemistry, QD1-999, Inorganic chemistry, QD146-197, General. Including alchemy, QD1-65

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Relation: https://www.mdpi.com/2310-2861/8/2/83; https://doaj.org/toc/2310-2861

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Genomic Investigation of Methicillin-Resistant Staphylococcus aureus ST113 Strains Isolated from Tertiary Care Hospitals in Pakistan

Authors: Nimat Ullah, Hamza Arshad Dar, Kanwal Naz, Saadia Andleeb, Abdur Rahman, Muhammad Tariq Saeed, Fazal Hanan, Taeok Bae, Amjad Ali

Source: Antibiotics, Vol 10, Iss 9, p 1121 (2021)

Subject Terms: antibiotic-resistance, comparative genome analysis, methicillin-resistant Staphylococcus aureus, multi-locus sequence type, ST113, whole-genome sequencing, Therapeutics. Pharmacology, RM1-950

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Relation: https://www.mdpi.com/2079-6382/10/9/1121; https://doaj.org/toc/2079-6382

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Formal modeling and analysis of the hexosamine biosynthetic pathway: role of O-linked N-acetylglucosamine transferase in oncogenesis and cancer progression

Authors: Muhammad Tariq Saeed, Jamil Ahmad, Shahzina Kanwal, Andreana N. Holowatyj, Iftikhar A. Sheikh, Rehan Zafar Paracha, Aamir Shafi, Amnah Siddiqa, Zurah Bibi, Mukaram Khan, Amjad Ali

Source: PeerJ, Vol 4, p e2348 (2016)

Subject Terms: Biological regulatory networks (BRNs), René Thomas, Qualitative modeling, Model checking, Cancer, Hexosamine biosynthetic pathway, Medicine, Biology (General), QH301-705.5

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Relation: https://peerj.com/articles/2348.pdf; https://peerj.com/articles/2348/; https://doaj.org/toc/2167-8359

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Effects of Bacterial Fermentation on the Biochemical Constituents and Antioxidant Potential of Fermented and Unfermented Soybeans Using Probiotic Bacillus subtilis (KCTC 13241)

Authors: Muhammad Waqas Ali, Il-Doo Kim, Saqib Bilal, Raheem Shahzad, Muhammad Tariq Saeed, Bishnu Adhikari, Rizwana Begum Syed Nabi, Jeong Rae Kyo, Dong-Hyun Shin

Source: Molecules, Vol 22, Iss 12, p 2200 (2017)

Subject Terms: soybean, isoflavones, phenolic contents, antioxidant activity, cheonggukjang, Organic chemistry, QD241-441

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Relation: https://www.mdpi.com/1420-3049/22/12/2200; https://doaj.org/toc/1420-3049

Access URL: https://doaj.org/article/5aa1abfdd7dd467993f806215e456886