A genome-wide genetic linkage map and reference quality genome sequence for a new race in the wheat pathogen Pyrenophora tritici-repentis

Authors: Kariyawasam, Gayan K., Wyatt, Nathan, Shi, Gongjun, Liu, Sanzhen, Yan, Changhui, Ma, Yongchao, Zhong, Shaobin, Rasmussen, Jack B., Moolhuijzen, Paula, Moffat, Caroline S., Friesen, Timothy L., Liu, Zhaohui

Source: In Fungal Genetics and Biology July 2021 152

Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus

Authors: Rodriguez-Valle, Manuel, Moolhuijzen, Paula, Barrero, Roberto A., Ong, Chian Teng, Busch, Greta, Karbanowicz, Thomas, Booth, Mitchell, Clark, Richard, Koehbach, Johannes, Ijaz, Hina, Broady, Kevin, Agnew, Kim, Knowles, Aleta G., Bellgard, Matthew I., Tabor, Ala E.

Source: In International Journal for Parasitology January 2018 48(1):71-82

The identification and deletion of the polyketide synthase‐nonribosomal peptide synthase gene responsible for the production of the phytotoxic triticone A/B in the wheat fungal pathogen Pyrenophora tritici‐repentis

Authors: Rawlinson, Catherine, See, Pao Theen, Moolhuijzen, Paula, Li, Hang, Moffat, Caroline S., Chooi, Yit‐Heng, Oliver, Richard P.

Source: Environmental microbiology. 21(12):4875-4886

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100094314763.0x000001&indx=1&recIds=ETOCvdc_100094314763.0x000001

A new PacBio genome sequence of an Australian Pyrenophora tritici-repentis race 1 isolate

Authors: Moolhuijzen, Paula [and others]

Source: BMC research notes. 12(1):1-5

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100190412507.0x000001&indx=1&recIds=ETOCvdc_100190412507.0x000001

Gene-enriched draft genome of the cattle tick Rhipicephalus microplus: assembly by the hybrid Pacific Biosciences/Illumina approach enabled analysis of the highly repetitive genome

Authors: Barrero, Roberto A., Guerrero, Felix D., Black, Michael, McCooke, John, Chapman, Brett, Schilkey, Faye, Pérez de León, Adalberto A., Miller, Robert J., Bruns, Sara, Dobry, Jason, Mikhaylenko, Galina, Stormo, Keith, Bell, Callum, Tao, Quanzhou, Bogden, Robert, Moolhuijzen, Paula M., Hunter, Adam, Bellgard, Matthew I.

Source: In International Journal for Parasitology August 2017 47(9):569-583

Comparative genomics of the wheat fungal pathogen Pyrenophora tritici-repentis reveals chromosomal variations and genome plasticity

Authors: Moolhuijzen, Paula, See, Pao, Hane, James, Shi, Gongjun, Liu, Zhaohui, Oliver, Richard, Moffat, Caroline

Source: BMC genomics. 19(1):1-23

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100181180573.0x000001&indx=1&recIds=ETOCvdc_100181180573.0x000001

The first genome assembly of fungal pathogen Pyrenophora tritici-repentis race 1 isolate using Oxford Nanopore MinION sequencing.

Authors: Moolhuijzen, Paula¹ (AUTHOR) paula.moolhuijzen@curtin.edu.au, See, Pao Theen¹ (AUTHOR), Moffat, Caroline S.¹ (AUTHOR)

Source: BMC Research Notes. 8/28/2021, Vol. 14 Issue 1, p1-5. 5p.

Subject Terms: *PYRENOPHORA, *FUNGAL genomes, *GENOMES, *GENOMICS, *CHROMOSOMES, *NUCLEOTIDE sequencing, *COMPARATIVE genomics

CoreDetector: a flexible and efficient program for core-genome alignment of evolutionary diverse genomes.

Authors: Fruzangohar, Mario¹ (AUTHOR) mario.fruzangohar@adelaide.edu.au, Moolhuijzen, Paula² (AUTHOR), Bakaj, Nicolette¹ (AUTHOR), Taylor, Julian¹ (AUTHOR)

Source: Bioinformatics. Nov2023, Vol. 39 Issue 11, p1-10. 10p.

Subject Terms: *GENOMES, *GENOME size, *CULTIVARS, *EUKARYOTIC genomes, *EUKARYOTES

Geographic Terms: JAVA (Indonesia)

Rhipicephalus microplus lipocalins (LRMs): Genomic identification and analysis of the bovine immune response using in silico predicted B and T cell epitopes

Authors: Rodriguez-Valle, Manuel, Moolhuijzen, Paula, Piper, Emily K., Weiss, Olivia, Vance, Megan, Bellgard, Matthew, Lew-Tabor, Ala

Source: In International Journal for Parasitology August 2013 43(9):739-752

PacBio genome sequencing reveals new insights into the genomic organisation of the multi-copy ToxB gene of the wheat fungal pathogen Pyrenophora tritici-repentis

Authors: Moolhuijzen, Paula, See, Pao Theen, Moffat, Caroline S.

Source: BMC genomics. 21(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100171740741.0x000001&indx=1&recIds=ETOCvdc_100171740741.0x000001

Hierarchical clustering of MS/MS spectra from the firefly metabolome identifies new lucibufagin compounds

Authors: Rawlinson, Catherine, Jones, Darcy, Rakshit, Suman, Meka, Shiv, Moffat, Caroline S., Moolhuijzen, Paula

Source: Scientific reports. 10(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100174701722.0x000001&indx=1&recIds=ETOCvdc_100174701722.0x000001

Exploration of wheat and pathogen transcriptomes during tan spot infection

Authors: Moolhuijzen, Paula, See, Pao, Moffat, Caroline

Source: BMC research notes. 11(1):1-3

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100185357729.0x000001&indx=1&recIds=ETOCvdc_100185357729.0x000001

Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis

Authors: Moffat, Caroline, Stoll, Thomas, Moolhuijzen, Paula

Source: BMC research notes. 11(1):1-3

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100184648342.0x000001&indx=1&recIds=ETOCvdc_100184648342.0x000001

Shoot transcriptome of the giant reed, Arundo donax

Authors: Barrero, Roberto A., Guerrero, Felix D., Moolhuijzen, Paula, Goolsby, John A., Tidwell, Jason, Bellgard, Stanley E., Bellgard, Matthew I.

Source: Data in brief. 3:1-6

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100129204177.0x000001&indx=1&recIds=ETOCvdc_100129204177.0x000001

Spatiotemporal patterns of wheat response to Pyrenophora tritici-repentis in asymptomatic regions revealed by transcriptomic and X-ray fluorescence microscopy analyses.

Authors: Moolhuijzen, Paula¹ (AUTHOR), Sanglard, Lilian M V P¹ (AUTHOR), Paterson, David J² (AUTHOR), Gray, Sean¹ (AUTHOR), Khambatta, Karina³ (AUTHOR), Hackett, Mark J³ (AUTHOR), Zerihun, Ayalsew¹ (AUTHOR), Gibberd, Mark R¹ (AUTHOR) mark.gibberd@curtin.edu.au, Naim, Fatima¹ (AUTHOR) fatima.naim@curtin.edu.au

Source: Journal of Experimental Botany. 8/17/2023, Vol. 74 Issue 15, p4707-4720. 14p.

Subject Terms: *X-ray spectroscopy, *PYRENOPHORA, *TRANSCRIPTOMES, *X-ray fluorescence, *PLANT diseases, *PHYTOPATHOGENIC microorganisms, *GENE expression

Differential recognition by tick-resistant cattle of the recombinantly expressed Rhipicephalus microplus serine protease inhibitor-3 (RMS-3)

Authors: Rodriguez-Valle, Manuel, Vance, Megan, Moolhuijzen, Paula M., Tao, Xu, Lew-Tabor, Ala E.

Source: In Ticks and Tick-borne Diseases June 2012 3(3):159-169

CattleTickBase: An integrated Internet-based bioinformatics resource for Rhipicephalus (Boophilus) microplus

Authors: Bellgard, Matthew I., Moolhuijzen, Paula M., Guerrero, Felix D., Schibeci, David, Rodriguez-Valle, Manuel, Peterson, Daniel G., Dowd, Scot E., Barrero, Roberto, Hunter, Adam, Miller, Robert J., Lew-Tabor, Ala E.

Source: In International Journal for Parasitology February 2012 42(2):161-169

Correction to: PacBio genome sequencing reveals new insights into the genomic organisation of the multi-copy ToxB gene of the wheat fungal pathogen Pyrenophora tritici-repentis.

Authors: Moolhuijzen, Paula¹ (AUTHOR) paula.moolhuijzen@curtin.edu.au, See, Pao Theen¹ (AUTHOR), Moffat, Caroline S.¹ (AUTHOR)

Source: BMC Genomics. 8/9/2021, Vol. 22 Issue 1, p1-3. 3p.

Subject Terms: *FUNGAL genes, *PYRENOPHORA, *FUNGAL genetics, *X chromosome, *COMPARATIVE genomics, *CHROMOSOMES

A unique resistance mechanism is associated with RBgh2 barley powdery mildew adult plant resistance.

Authors: Moolhuijzen, Paula¹ (AUTHOR), Ge, Cynthia¹ (AUTHOR), Palmiero, Elzette¹ (AUTHOR), Ellwood, Simon R.¹ (AUTHOR) srellwood@gmail.com

Source: Theoretical & Applied Genetics. Jun2023, Vol. 136 Issue 6, p1-12. 12p.

Suppressive subtractive hybridization analysis of Rhipicephalus (Boophilus) microplus larval and adult transcript expression during attachment and feeding

Authors: Lew-Tabor, Ala E., Moolhuijzen, Paula M., Vance, Megan E., Kurscheid, Sebastian, Valle, Manuel Rodriguez, Jarrett, Sandra, Minchin, Catherine M., Jackson, Louise A., Jonsson, Nick N., Bellgard, Matthew I., Guerrero, Felix D.

Source: In Veterinary Parasitology 10 February 2010 167(2-4):304-320