Developmental dynamics of gene expression and alternative polyadenylation in the Caenorhabditis elegans germline

Authors: West, Sean, Mecenas, Desirea, Gutwein, Michelle, Aristizábal-Corrales, David, Piano, Fabio, Gunsalus, Kristin

Source: Genome biology. 19(1):1-19

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100161310460.0x000001&indx=1&recIds=ETOCvdc_100161310460.0x000001

In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics

Authors: Chen, Jia-Xuan ^{‡, §}, Cipriani, Patricia G. ^{§, ¶}, Mecenas, Desirea ^§, Polanowska, Jolanta ^{§, ‖}, Piano, Fabio ^{§, ¶}, Gunsalus, Kristin C. ^{§, ¶, ‡‡}, Selbach, Matthias ^{‡, **, ‡‡}

Source: In Molecular & Cellular Proteomics May 2016 15(5):1642-1657

Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project

Authors: modENCODE Consortium, Gerstein, Mark B., Lu, Zhi John, Van Nostrand, Eric L., Cheng, Chao, Arshinoff, Bradley I., Liu, Tao, Yip, Kevin Y., Robilotto, Rebecca, Rechtsteiner, Andreas, Ikegami, Kohta, Alves, Pedro, Chateigner, Aurelien, Perry, Marc, Morris, Mitzi, Auerbach, Raymond K., Feng, Xin, Leng, Jing, Vielle, Anne, Niu, Wei, Rhrissorrakrai, Kahn, Agarwal, Ashish, Alexander, Roger P., Barber, Galt, Brdlik, Cathleen M., Brennan, Jennifer, Brouillet, Jeremy Jean, Carr, Adrian, Cheung, Ming-Sin, Clawson, Hiram, Contrino, Sergio, Dannenberg, Luke O., Dernburg, Abby F., Desai, Arshad, Dick, Lindsay, Dosé, Andréa C., Du, Jiang, Egelhofer, Thea, Ercan, Sevinc, Euskirchen, Ghia, Ewing, Brent, Feingold, Elise A., Gassmann, Reto, Good, Peter J., Green, Phil, Gullier, Francois, Gutwein, Michelle, Guyer, Mark S., Habegger, Lukas, Han, Ting, Henikoff, Jorja G., Henz, Stefan R., Hinrichs, Angie, Holster, Heather, Hyman, Tony, Iniguez, A. Leo, Janette, Judith, Jensen, Morten, Kato, Masaomi, Kent, W. James, Kephart, Ellen, Khivansara, Vishal, Khurana, Ekta, Kim, John K., Kolasinska-Zwierz, Paulina, Lai, Eric C., Latorre, Isabel, Leahey, Amber, Lewis, Suzanna, Lloyd, Paul, Lochovsky, Lucas, Lowdon, Rebecca F., Lubling, Yaniv, Lyne, Rachel, MacCoss, Michael, Mackowiak, Sebastian D., Mangone, Marco, McKay, Sheldon, Mecenas, Desirea, Merrihew, Gennifer, Miller, David M., Muroyama, Andrew, Murray, John I., Ooi, Siew-Loon, Pham, Hoang, Phippen, Taryn, Preston, Elica A., Rajewsky, Nikolaus, Rätsch, Gunnar, Rosenbaum, Heidi, Rozowsky, Joel, Rutherford, Kim, Ruzanov, Peter, Sarov, Mihail, Sasidharan, Rajkumar, Sboner, Andrea, Scheid, Paul, Segal, Eran, Shin, Hyunjin, Shou, Chong, Slack, Frank J., Slightam, Cindie, Smith, Richard, Spencer, William C., Stinson, E. O., Taing, Scott, Takasaki, Teruaki, Vafeados, Dionne, Voronina, Ksenia, Wang, Guilin, Washington, Nicole L., Whittle, Christina M., Wu, Beijing, Yan, Koon-Kiu, Zeller, Georg, Zha, Zheng, Zhong, Mei, Zhou, Xingliang, Ahringer, Julie, Strome, Susan, Gunsalus, Kristin C., Micklem, Gos, Liu, X. Shirley, Reinke, Valerie, Kim, Stuart K., Hillier, LaDeana W., Henikoff, Steven, Piano, Fabio, Snyder, Michael, Stein, Lincoln, Lieb, Jason D., Waterston, Robert H.

Source: Science, 2010 Dec . 330(6012), 1775-1787.

Access URL: https://www.jstor.org/stable/40986581

In Vivo and Transcriptome-wide Identification of RNA Binding Protein Target Sites

Authors: Jungkamp, Anna-Carina, Stoeckius, Marlon, Mecenas, Desirea, Grün, Dominic, Mastrobuoni, Guido, Kempa, Stefan, Rajewsky, Nikolaus

Source: In Molecular Cell 2011 44(5):828-840

A compendium of RNA-binding motifs for decoding gene regulation.

Authors: Ray, Debashish, Kazan, Hilal, Cook, Kate B., Weirauch, Matthew T., Najafabadi, Hamed S., Li, Xiao, Gueroussov, Serge, Albu, Mihai, Zheng, Hong, Yang, Ally, Na, Hong, Irimia, Manuel, Matzat, Leah H., Dale, Ryan K., Smith, Sarah A., Yarosh, Christopher A., Kelly, Seth M., Nabet, Behnam, Mecenas, Desirea, Li, Weimin

Source: Nature. 7/11/2013, Vol. 499 Issue 7457, p172-177. 6p. 5 Graphs.

Subjects: RIBONUCLEASES, GENES, EUKARYOTES, PHYSIOLOGY, DISEASES, PROTEINS

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In VivoInteraction Proteomics in Caenorhabditis elegansEmbryos Provides New Insights into P Granule Dynamics*

Authors: Chen, Jia-Xuan, Cipriani, Patricia G., Mecenas, Desirea, Polanowska, Jolanta, Piano, Fabio, Gunsalus, Kristin C., Selbach, Matthias

Source: Molecular and Cellular Proteomics (MCP Online); May 2016, Vol. 15 Issue: 5 p1642-1657, 16p