Employing tree bisection and reconnection rearrangement for parsimony inference in MPBoot

Authors: Huynh, Tien Dung, Vu, Quoc Tuan, Nguyen, Viet Dung, Hoang, Diep Thi

Source: 2022 14th International Conference on Knowledge and Systems Engineering (KSE) Knowledge and Systems Engineering (KSE), 2022 14th International Conference on. :1-6 Oct, 2022

Relation: 2022 14th International Conference on Knowledge and Systems Engineering (KSE)

A distributed algorithm for the parsimony bootstrap approximation

Authors: Pham, Nghia, Hoang, Diep Thi

Source: 2021 13th International Conference on Knowledge and Systems Engineering (KSE) Knowledge and Systems Engineering (KSE), 2021 13th International Conference on. :1-6 Nov, 2021

Relation: 2021 13th International Conference on Knowledge and Systems Engineering (KSE)

Phylogenetic relationships of Neogene hamsters (Mammalia, Rodentia, Cricetinae) revealed under Bayesian inference and maximum parsimony

Authors: Moritz Dirnberger, Pablo Peláez-Campomanes, Raquel López-Antoñanzas

Source: PeerJ, Vol 12, p e18440 (2024)

Subject Terms: Rodentia, Cricetinae, Bayesian inference, Maximum parsimony, Tip-dating, Morphological clock, Medicine, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://peerj.com/articles/18440.pdf; https://peerj.com/articles/18440/; https://doaj.org/toc/2167-8359

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Topology reconstruction in telecommunication networks: Embedding operations research within deep learning

Authors: Rasmussen, Tobias Engelhardt ^{a, ⁎}, Sørensen, Siv ^b, Pisinger, David ^b, Jørgensen, Thomas Martini ^a, Baum, Andreas ^a

Source: In Computers and Operations Research April 2025 176

Is the Current Systematic Subdivision of the Subfamily Neanurinae (Collembola, Neanuridae) Still Valid? Testing the Monophyly and Phylogenetic Relationships of Currently Established Tribes of the Neanurinae

Authors: Grzegorz Paśnik, Adrian Smolis

Source: Insects, Vol 15, Iss 9, p 672 (2024)

Subject Terms: taxonomy, classification, maximum parsimony, Bayesian Inference, characters evolution, Science

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Relation: https://www.mdpi.com/2075-4450/15/9/672; https://doaj.org/toc/2075-4450

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A new phylogenetic tree sampling method for maximum parsimony bootstrapping and proof-of-concept implementation

Authors: Hoang, Diep Thi, Vinh, Le Sy, Flouri, Tomas, Stamatakis, Alexandros, von Haeseler, Arndt, Minh, Bui Quang

Source: 2016 Eighth International Conference on Knowledge and Systems Engineering (KSE) Knowledge and Systems Engineering (KSE), 2016 Eighth International Conference on. :1-6 Oct, 2016

Relation: 2016 Eighth International Conference on Knowledge and Systems Engineering (KSE)

Common Methods for Phylogenetic Tree Construction and Their Implementation in R

Authors: Yue Zou, Zixuan Zhang, Yujie Zeng, Hanyue Hu, Youjin Hao, Sheng Huang, Bo Li

Source: Bioengineering, Vol 11, Iss 5, p 480 (2024)

Subject Terms: phylogenetic tree, neighbor-joining method, maximum parsimony method, maximum likelihood method, Bayesian method, tree integration, Technology, Biology (General), QH301-705.5

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Relation: https://www.mdpi.com/2306-5354/11/5/480; https://doaj.org/toc/2306-5354

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A Brief Review to Phylogenetic Reconstruction by Maximum Parsimony

Authors: Huang, S.-Q., Zheng, W., Zheng, W.-M.

Source: 2015 Fifth International Conference on Instrumentation and Measurement, Computer, Communication and Control (IMCCC) Instrumentation and Measurement, Computer, Communication and Control (IMCCC), 2015 Fifth International Conference on. :830-835 Sep, 2015

Relation: 2015 Fifth International Conference on Instrumentation & Measurement, Computer, Communication and Control (IMCCC)

A species clustering method based on variation of molecular data with the aid of variance proportion

Authors: Ghavidel, Abolfazl, Rezaeian, Amin, Rezaee, Mohammadreza

Source: 2015 IEEE 2nd International Conference on Recent Trends in Information Systems (ReTIS) Recent Trends in Information Systems (ReTIS), 2015 IEEE 2nd International Conference on. :151-156 Jul, 2015

Relation: 2015 IEEE 2nd International Conference on Recent Trends in Information Systems (ReTIS)

An optimized algorithm to find maximum parsimonious tree using PrimeNucleotide based approach

Authors: Ajwad, Rasif, Hossain, Syed Nayem, Mostaeen, Golam, Mottalib, M. A.

Source: 2014 17th International Conference on Computer and Information Technology (ICCIT) Computer and Information Technology (ICCIT), 2014 17th International Conference on. :127-131 Dec, 2014

Relation: 2014 17th International Conference on Computer and Information Technology (ICCIT)

The Evaluations Of Taxonomic Classifications In The Genus Trifolium L. Based On ITS Sequences

Authors: Yudum Yeltekin, Aykut Yılmaz

Source: Sakarya Üniversitesi Fen Bilimleri Enstitüsü Dergisi, Vol 26, Iss 3, Pp 545-553 (2022)

Subject Terms: trifolium, fabaceae, internal transcribed spacer, maximum parsimony, lotoidea, Engineering (General). Civil engineering (General), TA1-2040, Chemistry, QD1-999

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Relation: https://dergipark.org.tr/tr/download/article-file/2257683; https://doaj.org/toc/2147-835X

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Structural parsimony: Reductions in sequence space

Authors: Blanco, Roberto

Source: 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2010 IEEE International Conference on. :57-61 Dec, 2010

Relation: 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Reconstructing phylogenetic networks using maximum parsimony

Authors: Nakhleh, L., Jin, G., Zhao, F., Mellor-Crummey, J.

Source: 2005 IEEE Computational Systems Bioinformatics Conference (CSB'05) Computational Systems Bioinformatics Computational Systems Bioinformatics Conference, 2005. Proceedings. 2005 IEEE. :93-102 2005

Relation: Proceedings. 2005 IEEE Computational Systems Bioinformatics Conference

Maximum parsimony reconciliation in the DTLOR model

Authors: Jingyi Liu, Ross Mawhorter, Nuo Liu, Santi Santichaivekin, Eliot Bush, Ran Libeskind-Hadas

Source: BMC Bioinformatics, Vol 22, Iss S10, Pp 1-22 (2021)

Subject Terms: Microbial evolution, Phylogenetic trees, Maximum parsimony reconciliation, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2105

Access URL: https://doaj.org/article/a1c8f15f881242f982326f7b4a778ae3

NoC-Based Hardware Accelerator for Breakpoint Phylogeny

Authors: Majumder, Turbo, Sarkar, Souradip, Pande, Partha Pratim, Kalyanaraman, Ananth

Source: IEEE Transactions on Computers IEEE Trans. Comput. Computers, IEEE Transactions on. 61(6):857-869 Jun, 2012

Maximum-Parsimony Haplotype Inference Based on Sparse Representations of Genotypes

Authors: Jajamovich, G. H., Wang, X.

Source: IEEE Transactions on Signal Processing IEEE Trans. Signal Process. Signal Processing, IEEE Transactions on. 60(4):2013-2023 Apr, 2012

High Performance Phylogenetic Analysis With Maximum Parsimony on Reconfigurable Hardware

Authors: Kasap, S., Benkrid, K.

Source: IEEE Transactions on Very Large Scale Integration (VLSI) Systems IEEE Trans. VLSI Syst. Very Large Scale Integration (VLSI) Systems, IEEE Transactions on. 19(5):796-808 May, 2011

Morphometric and phylogenetic relationship of Arum L. in Iran

Authors: Leila Joudi

Source: بیولوژی کاربردی, Vol 10, Iss 39, Pp 17-36 (2020)

Subject Terms: cluster analysis, molecular marker, phylogenetic relationship, maximum parsimony, bayesian, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://sjoapb.qom.iau.ir/article_680373_c65d13144090c6cac57c5b6522376478.pdf; https://doaj.org/toc/2538-3434

Access URL: https://doaj.org/article/6508e5a125524e18a6737287598f3476

Building a Twig Phylogeny

Source: The American Biology Teacher, 2015 Feb . 77(2), 141-144.

Access URL: https://www.jstor.org/stable/10.1525/abt.2015.77.2.10

Special Paper: Directional Asymmetry of Long-Distance Dispersal and Colonization Could Mislead Reconstructions of Biogeography

Authors: Cook, Lyn G., Crisp, Michael D.

Source: Journal of Biogeography, 2005 May 01. 32(5), 741-754.

Access URL: https://www.jstor.org/stable/3566265