Comparison of diagnostic performance between Oncomine Dx target test and AmoyDx panel for detecting actionable mutations in lung cancer

Authors: Yuki Nagakubo, Yosuke Hirotsu, Mona Yoshino, Kenji Amemiya, Ryota Saito, Yumiko Kakizaki, Toshiharu Tsutsui, Yoshihiro Miyashita, Taichiro Goto, Masao Omata

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-11 (2024)

Subject Terms: Lung cancer, Diagnostic, Oncomine, Amoy, False positive, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/ff4cfae4f35e4d38a5686f8341916c0a

Simulation analysis of EGFR mutation detection: Oncomine Dx target test and AmoyDx panel impact on lung cancer treatment decisions

Authors: Yosuke Hirotsu, Takahiro Nakagomi, Yuki Nagakubo, Taichiro Goto, Masao Omata

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-8 (2024)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/546f121726744ca1814e62d53a0875e0

Brief Report: Tepotinib as a Treatment Option in MET Exon 14 Skipping-Positive Lung Cancers—Investigating Discordance Between ArcherMET and the Oncomine Dx Target Test

Authors: Yoshihiro Miyashita, MD, Yosuke Hirotsu, PhD, Yuki Nagakubo, MS, Hiroaki Kobayashi, MD, Makoto Kawaguchi, MD, Koki Hata, MD, Ryota Saito, MD, Yumiko Kakizaki, MD, Toshiharu Tsutsui, PhD, Toshio Oyama, MD, Masao Omata, MD

Source: JTO Clinical and Research Reports, Vol 5, Iss 6, Pp 100679- (2024)

Subject Terms: Lung cancer, MET, Tepotinib, Oncomine, Archer, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2666364324000493; https://doaj.org/toc/2666-3643

Access URL: https://doaj.org/article/02b007faf1354427b6783f95d8c35a84

Genetic dissection of intratumor heterogeneity of PD‐L1 expression in EGFR‐mutated lung adenocarcinoma

Authors: Kei Kunimasa, Yosuke Hirotsu, Kenji Amemiya, Keiichiro Honma, Harumi Nakamura, Kazumi Nishino, Masao Omata

Source: Thoracic Cancer, Vol 14, Iss 22, Pp 2210-2215 (2023)

Subject Terms: EGFR mutation, intratumor heterogeneity, PD‐L1 expression, tumor infiltrating lymphocytes, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1759-7706; https://doaj.org/toc/1759-7714

Access URL: https://doaj.org/article/394cbfdb28f54f2783e5a8a89886f7da

Effectiveness of the severe acute respiratory syndrome coronavirus 2 Omicron BA.5 bivalent vaccine on symptoms in healthcare workers with BA.5 infection

Authors: Yosuke Hirotsu, Mika Takatori, Hitoshi Mochizuki, Masao Omata

Source: Vaccine: X, Vol 17, Iss , Pp 100433- (2024)

Subject Terms: COVID-19, Vaccine, Symptom, Bivalent, Omicron, Immunologic diseases. Allergy, RC581-607

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2590136224000068; https://doaj.org/toc/2590-1362

Access URL: https://doaj.org/article/c35c0d7cee2c44698d797dec937bbfb7

Validity of pathological diagnosis for early colorectal cancer in genetic background

Authors: Kenichiro Okimoto, Yosuke Hirotsu, Makoto Arai, Kenji Amemiya, Naoki Akizue, Yuki Ohta, Takashi Taida, Keiko Saito, Hiroshi Ohyama, Tomoaki Matsumura, Motoi Nishimura, Kazuyuki Matsushita, Keisuke Matsusaka, Toshio Oyama, Hitoshi Mochizuki, Tetsuhiro Chiba, Jun Kato, Jun‐ichiro Ikeda, Osamu Yokosuka, Naoya Kato, Masao Omata

Source: Cancer Medicine, Vol 12, Iss 7, Pp 8490-8498 (2023)

Subject Terms: colorectal adenoma, colorectal cancer, next‐generation sequence, pathological diagnosis, TCGA, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7634

Access URL: https://doaj.org/article/0a05a72dd34f4bc99d4eef95784d4b12

Lung tropism in hospitalized patients following infection with SARS-CoV-2 variants from D614G to Omicron BA.2

Authors: Yosuke Hirotsu, Yumiko Kakizaki, Akitoshi Saito, Toshiharu Tsutsui, Syunya Hanawa, Haruna Yamaki, Syuichiro Ide, Makoto Kawaguchi, Hiroaki Kobayashi, Yoshihiro Miyashita, Masao Omata

Source: Communications Medicine, Vol 3, Iss 1, Pp 1-10 (2023)

Subject Terms: Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/2730-664X

Access URL: https://doaj.org/article/8084e50cd55a4111ae8f7d5a4de3d95b

Simple IHC reveals complex MMR alternations than PCR assays: Validation by LCM and next‐generation sequencing

Authors: Kenji Amemiya, Yosuke Hirotsu, Yuki Nagakubo, Shunsuke Watanabe, Saki Amemiya, Hitoshi Mochizuki, Toshio Oyama, Tetsuo Kondo, Masao Omata

Source: Cancer Medicine, Vol 11, Iss 23, Pp 4479-4490 (2022)

Subject Terms: heterogeneity, immunohistochemistry, MMR, MSI, next‐generation sequencing, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7634

Access URL: https://doaj.org/article/fa3f115448a64e74b08c9171d84662f7

Classification of Omicron BA.1, BA.1.1, and BA.2 sublineages by TaqMan assay consistent with whole genome analysis data

Authors: Yosuke Hirotsu, Makoto Maejima, Masahiro Shibusawa, Yume Natori, Yuki Nagakubo, Kazuhiro Hosaka, Hitomi Sueki, Hitoshi Mochizuki, Toshiharu Tsutsui, Yumiko Kakizaki, Yoshihiro Miyashita, Masao Omata

Source: International Journal of Infectious Diseases, Vol 122, Iss , Pp 486-491 (2022)

Subject Terms: SARS-CoV-2, VOC, Omicron, BA.1, BA.2, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1201971222003733; https://doaj.org/toc/1201-9712

Access URL: https://doaj.org/article/73f355ecea044d9e8c7e6d7f9b4eef26

Antibody Response to the BA.5 Bivalent Vaccine Shot: a Two-Year Follow-Up Study following Initial COVID-19 mRNA Vaccination

Authors: Yosuke Hirotsu, Hiroki Sugiura, Mika Takatori, Hitoshi Mochizuki, Masao Omata

Source: Microbiology Spectrum, Vol 11, Iss 3 (2023)

Subject Terms: spike, bivalent vaccine, antibody, mRNA vaccine, COVID-19, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/812e89ce5eba4d4da3f7d604a7dd394d

Direct comparison of Xpert Xpress, FilmArray Respiratory Panel, Lumipulse antigen test, and RT-qPCR in 165 nasopharyngeal swabs

Authors: Yosuke Hirotsu, Makoto Maejima, Masahiro Shibusawa, Yume Natori, Yuki Nagakubo, Kazuhiro Hosaka, Hitomi Sueki, Kenji Amemiya, Miyoko Hayakawa, Hitoshi Mochizuki, Toshiharu Tsutsui, Yumiko Kakizaki, Yoshihiro Miyashita, Masao Omata

Source: BMC Infectious Diseases, Vol 22, Iss 1, Pp 1-9 (2022)

Subject Terms: SARS-CoV-2, COVID-19, Xpert Xpress, FilmArray, Lumipulse, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2334

Access URL: https://doaj.org/article/751d23150ddd423597e4705622e9b830

Urinary L-Type Fatty Acid-Binding Protein Predicts Oxygen Demand of COVID-19 in Initially Mild Cases

Authors: Daisuke Katagiri, MD, PhD, FASN, Yusuke Asai, PhD, Norio Ohmagari, MD, PhD, Masahiro Ishikane, MD, PhD, Sayaka Hikida, MD, PhD, Noriko Iwamoto, MD, PhD, Maki Nagashima, MT, Minami Suzuki, MD, PhD, Hideki Takano, MD, PhD, Jin Takasaki, MD, Masayuki Hojo, MD, PhD, Haruhito Sugiyama, MD, PhD, Katsushi Tokunaga, PhD, Yoshihiro Miyashita, MD, Masao Omata, MD, PhD, Keiichi Ohata, MS, Kevin P. Bliden, MBA, Udaya S. Tantry, PhD, Jeffrey R. Dahlen, PhD, Takeshi Sugaya, PhD, Paul A. Gurbel, MD, FACC, Eisei Noiri, MD, PhD, FASN

Source: Critical Care Explorations, Vol 5, Iss 3, p e0873 (2023)

Subject Terms: Medical emergencies. Critical care. Intensive care. First aid, RC86-88.9

File Description: electronic resource

Relation: http://journals.lww.com/10.1097/CCE.0000000000000873; https://doaj.org/toc/2639-8028

Access URL: https://doaj.org/article/c441b337caae44d7ad8b8954bdd690ac

The dynamic change of antibody index against Covid-19 is a powerful diagnostic tool for the early phase of the infection and salvage PCR assay errors

Authors: Masao Omata, Yosuke Hirotsu, Hiroki Sugiura, Makoto Maejima, Yuki Nagakubo, Kenji Amemiya, Miyoko Hayakawa, Toshiharu Tsutsui, Yumiko Kakizaki, Hitoshi Mochizuki, Yoshihiro Miyashita

Source: Journal of Microbiology, Immunology and Infection, Vol 54, Iss 5, Pp 830-838 (2021)

Subject Terms: Covid-19, Early diagnosis, Antibody test, PCR assay, Microbiology, QR1-502

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1684118221000086; https://doaj.org/toc/1684-1182

Access URL: https://doaj.org/article/c58044cae40143e98c5c7e8a3e240724

Genetic profiles of Barrett’s esophagus and esophageal adenocarcinoma in Japanese patients

Authors: Mamoru Tokunaga, Kenichiro Okimoto, Naoki Akizue, Kentaro Ishikawa, Yosuke Hirotsu, Kenji Amemiya, Masayuki Ota, Keisuke Matsusaka, Motoi Nishimura, Kazuyuki Matsushita, Tsubasa Ishikawa, Ariki Nagashima, Wataru Shiratori, Tatsuya Kaneko, Hirotaka Oura, Kengo Kanayama, Yuki Ohta, Takashi Taida, Keiko Saito, Tomoaki Matsumura, Tetsuhiro Chiba, Hitoshi Mochizuki, Makoto Arai, Jun Kato, Jun-ichiro Ikeda, Masao Omata, Naoya Kato

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-11 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/e213bb3c99c349dcbcdcbcd125e3cbfb

Comparison of Roche and Lumipulse quantitative SARS-CoV-2 antigen test performance using automated systems for the diagnosis of COVID-19

Authors: Yosuke Hirotsu, Hiroki Sugiura, Makoto Maejima, Miyoko Hayakawa, Hitoshi Mochizuki, Toshiharu Tsutsui, Yumiko Kakizaki, Yoshihiro Miyashita, Masao Omata

Source: International Journal of Infectious Diseases, Vol 108, Iss , Pp 263-269 (2021)

Subject Terms: SARS-CoV-2, COVID-19, Antigen, Roche, Lumipulse, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1201971221004707; https://doaj.org/toc/1201-9712

Access URL: https://doaj.org/article/b8256eedd8aa41c2b444beb2268a1aa9

Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesions

Authors: Naoki Akizue, Kenichiro Okimoto, Makoto Arai, Yosuke Hirotsu, Kenji Amemiya, Hirotaka Oura, Tatsuya Kaneko, Mamoru Tokunaga, Kentaro Ishikawa, Yuki Ohta, Takashi Taida, Keiko Saito, Daisuke Maruoka, Tomoaki Matsumura, Tomoo Nakagawa, Motoi Nishimura, Tetsuhiro Chiba, Kazuyuki Matsushita, Hitoshi Mochizuki, Osamu Yokosuka, Masao Omata, Naoya Kato

Source: Cancer Medicine, Vol 10, Iss 11, Pp 3545-3555 (2021)

Subject Terms: background mucosa, esophageal squamous cell carcinoma, Lugol‐voiding lesions, NOTCHI, TP53, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7634

Access URL: https://doaj.org/article/25119e7086a74f44bbf7ce3b4a073458

Prospective study of 1308 nasopharyngeal swabs from 1033 patients using the LUMIPULSE SARS-CoV-2 antigen test: Comparison with RT-qPCR

Authors: Yosuke Hirotsu, Makoto Maejima, Masahiro Shibusawa, Kenji Amemiya, Yuki Nagakubo, Kazuhiro Hosaka, Hitomi Sueki, Miyoko Hayakawa, Hitoshi Mochizuki, Toshiharu Tsutsui, Yumiko Kakizaki, Yoshihiro Miyashita, Masao Omata

Source: International Journal of Infectious Diseases, Vol 105, Iss , Pp 7-14 (2021)

Subject Terms: SARS-CoV-2, COVID-19, Antigen, RT-qPCR, LUMIPULSE, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1201971221000904; https://doaj.org/toc/1201-9712

Access URL: https://doaj.org/article/06418e91b57644daaf24809c6a9d1306

Comparison of automated SARS-CoV-2 antigen test for COVID-19 infection with quantitative RT-PCR using 313 nasopharyngeal swabs, including from seven serially followed patients

Authors: Yosuke Hirotsu, Makoto Maejima, Masahiro Shibusawa, Yuki Nagakubo, Kazuhiro Hosaka, Kenji Amemiya, Hitomi Sueki, Miyoko Hayakawa, Hitoshi Mochizuki, Toshiharu Tsutsui, Yumiko Kakizaki, Yoshihiro Miyashita, Shintaro Yagi, Satoshi Kojima, Masao Omata

Source: International Journal of Infectious Diseases, Vol 99, Iss , Pp 397-402 (2020)

Subject Terms: SARS-CoV-2, COVID-19, Antigen, RT-qPCR, Infection, Immunoassay, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1201971220306585; https://doaj.org/toc/1201-9712

Access URL: https://doaj.org/article/b6d163077aeb42d09d1145384d3a8770

Hepatic Arterial Infusion Chemotherapy versus Sorafenib in Patients with Advanced Hepatocellular Carcinoma

Authors: Kazuomi Ueshima, Sadahisa Ogasawara, Masafumi Ikeda, Yutaka Yasui, Takeshi Terashima, Tatsuya Yamashita, Shuntaro Obi, Shinpei Sato, Hiroshi Aikata, Takumi Ohmura, Hidekatsu Kuroda, Takamasa Ohki, Kengo Nagashima, Yoshihiko Ooka, Masahiro Takita, Masayuki Kurosaki, Kazuaki Chayama, Shuichi Kaneko, Namiki Izumi, Naoya Kato, Masatoshi Kudo, Masao Omata

Source: Liver Cancer, Pp 1-13 (2020)

Subject Terms: hepatic arterial infusion chemotherapy, sorafenib, advanced hepatocellular carcinoma, macrovascular invasion, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://www.karger.com/Article/FullText/508724; https://doaj.org/toc/2235-1795; https://doaj.org/toc/1664-5553

Access URL: https://doaj.org/article/ef5cfbd8fe554dd99240bb3311551d66

Genome analysis of peeling archival cytology samples detects driver mutations in lung cancer

Authors: Kei Kunimasa, Yosuke Hirotsu, Kenji Amemiya, Yuki Nagakubo, Taichiro Goto, Yoshihiro Miyashita, Yumiko Kakizaki, Toshiharu Tsutsui, Sotaro Otake, Hiroaki Kobayashi, Rumi Higuchi, Kie Inomata, Takashi Kumagai, Hitoshi Mochizuki, Harumi Nakamura, Shin‐ichi Nakatsuka, Kazumi Nishino, Fumio Imamura, Toru Kumagai, Toshio Oyama, Masao Omata

Source: Cancer Medicine, Vol 9, Iss 13, Pp 4501-4511 (2020)

Subject Terms: cytology, driver mutation, fusion gene, lung cancer, next‐generation sequence, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7634

Access URL: https://doaj.org/article/75f0fcd978ad4f3bae7726af3c2c4b63