LABS: linear amplification-based bisulfite sequencing for ultrasensitive cancer detection from cell-free DNA

Authors: Xiao-Long Cui, Ji Nie, Houxiang Zhu, Krissana Kowitwanich, Alana V. Beadell, Diana C. West-Szymanski, Zhou Zhang, Urszula Dougherty, Akushika Kwesi, Zifeng Deng, Yan Li, Danqing Meng, Kevin Roggin, Teresa Barry, Ryan Owyang, Ben Fefferman, Chang Zeng, Lu Gao, Carolyn W. T. Zhao, Yuri Malina, Jiangbo Wei, Melanie Weigert, Wenjun Kang, Ajay Goel, Brian C.-H. Chiu, Marc Bissonnette, Wei Zhang, Mengjie Chen, Chuan He

Source: Genome Biology, Vol 25, Iss 1, Pp 1-18 (2024)

Subject Terms: Linear amplification, Bisulfite sequencing, Low-input DNA, Cell-free DNA, Cancer detection, Biology (General), QH301-705.5, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1474-760X

Access URL: https://doaj.org/article/5bb50822efdf457baaf29b14934cc113

Sprouty4 is epigenetically upregulated in human colorectal cancer

Authors: Alexei J. Stuckel, Shuai Zeng, Zhen Lyu, Wei Zhang, Xu Zhang, Urszula Dougherty, Reba Mustafi, Tripti Khare, Qiong Zhang, Trupti Joshi, Marc Bissonnette, Sharad Khare

Source: Epigenetics, Vol 18, Iss 1 (2023)

Subject Terms: colorectal cancer, sprouty4, gene expression, dna methylation, dna hydroxymethylation, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1559-2294; https://doaj.org/toc/1559-2308

Access URL: https://doaj.org/article/01f8717e29a94b0eaa5128dbd992adb5

Analysis of genome-wide 5-hydroxymethylation of blood samples stored in different anticoagulants: opportunities for the expansion of clinical resources for epigenetic research

Authors: Lu Gao, Zhou Zhang, Xiao-Long Cui, Diana West-Szymanski, Chang Ye, Chuan He, Wei Zhang, Marc Bissonnette

Source: Epigenetics, Vol 18, Iss 1 (2023)

Subject Terms: 5-hydroxymethylcytosine, 5hmC-Seal, cfDNA, EDTA, heparin, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1559-2294; https://doaj.org/toc/1559-2308

Access URL: https://doaj.org/article/0976d9c24d404580be02b96f64fabf41

Aberrant regulation of CXCR4 in cancer via deviant microRNA-targeted interactions

Authors: Alexei J. Stuckel, Tripti Khare, Marc Bissonnette, Sharad Khare

Source: Epigenetics, Vol 17, Iss 13, Pp 2318-2331 (2022)

Subject Terms: microrna, oncomir, cxcr4, tumour suppressor, oncoviruses, microrna mimics, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1559-2294; https://doaj.org/toc/1559-2308

Access URL: https://doaj.org/article/ee2dbae64af94adf8ad00e06d8e14eb6

Association of Microsatellite Instability and Gene Expression Profile in Colorectal Carcinoma and Potential Implications for Therapy

Authors: Muhammad G. Kibriya, Farzana Jasmine, Yuliia Khamkevych, Maruf Raza, Mohammed Kamal, Marc Bissonnette, Habibul Ahsan

Source: Medicina, Vol 60, Iss 3, p 348 (2024)

Subject Terms: MSI, colorectal cancer, IL-17 signaling, immune check point inhibitors, gene expression, MMR deficiency, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.mdpi.com/1648-9144/60/3/348; https://doaj.org/toc/1010-660X; https://doaj.org/toc/1648-9144

Access URL: https://doaj.org/article/f0301a9271d74a91a66e7efc82d180a3

Upregulation of polycistronic microRNA-143 and microRNA-145 in colonocytes suppresses colitis and inflammation-associated colon cancer

Authors: Urszula Dougherty, Reba Mustafi, Hongyan Zhu, Xiaorong Zhu, Dilip Deb, Stephen C. Meredith, Fatma Ayaloglu-Butun, Michelle Fletcher, Arantxa Sanchez, Joel Pekow, Zifeng Deng, Nader Amini, Vani J Konda, Vijaya L. Rao, Atsushi Sakuraba, Akushika Kwesi, Sonia S Kupfer, Alessandro Fichera, Loren Joseph, John Hart, Fang He, Tong-Chuan He, Diana West-Szymanski, Yan Chun Li, Marc Bissonnette

Source: Epigenetics, Vol 16, Iss 12, Pp 1317-1334 (2021)

Subject Terms: mir-143/mir-145, dss colitis, azoxymethane, colon cancer, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1559-2294; https://doaj.org/toc/1559-2308

Access URL: https://doaj.org/article/acd55d7ef57b4fb5860f8bbd146ae130

Triggering cell death in cancers using self-illuminating nanocomposites

Authors: Tijana Rajh, Tamara Koritarov, Ben Blaiszik, Syeda Fatima Z. Rizvi, Vani Konda, Marc Bissonnette

Source: Frontiers in Chemistry, Vol 10 (2022)

Subject Terms: TiO2, nanocomposites, luciferase, bioluminescence, extracellular ATP, cancer, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fchem.2022.962161/full; https://doaj.org/toc/2296-2646

Access URL: https://doaj.org/article/b7ed2f2ef0b74aa187f6aad3b6565d31

Tumor‐Activatable Nanoparticles Target Low‐Density Lipoprotein Receptor to Enhance Drug Delivery and Antitumor Efficacy

Authors: Xiaomin Jiang, Wenbo Han, Jianqiao Liu, Jianming Mao, Morten J. Lee, Megan Rodriguez, Youyou Li, Taokun Luo, Ziwan Xu, Kaiting Yang, Marc Bissonnette, Ralph R. Weichselbaum, Wenbin Lin

Source: Advanced Science, Vol 9, Iss 24, Pp n/a-n/a (2022)

Subject Terms: chemotherapy, colorectal cancer, drug delivery, low‐density lipoprotein receptor, nanomedicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2198-3844

Access URL: https://doaj.org/article/50066efeaa414d2cb1308b46e06314f1

A human tissue map of 5-hydroxymethylcytosines exhibits tissue specificity through gene and enhancer modulation

Authors: Xiao-Long Cui, Ji Nie, Jeremy Ku, Urszula Dougherty, Diana C. West-Szymanski, Francois Collin, Christopher K. Ellison, Laura Sieh, Yuhong Ning, Zifeng Deng, Carolyn W. T. Zhao, Anna Bergamaschi, Joel Pekow, Jiangbo Wei, Alana V. Beadell, Zhou Zhang, Geeta Sharma, Raman Talwar, Patrick Arensdorf, Jason Karpus, Ajay Goel, Marc Bissonnette, Wei Zhang, Samuel Levy, Chuan He

Source: Nature Communications, Vol 11, Iss 1, Pp 1-11 (2020)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/422a834f9ee54a78aa65900aafeb0d8b

X-ray Activated Nanoplatforms for Deep Tissue Photodynamic Therapy

Authors: Jeffrey S. Souris, Lara Leoni, Hannah J. Zhang, Ariel Pan, Eve Tanios, Hsiu-Ming Tsai, Irina V. Balyasnikova, Marc Bissonnette, Chin-Tu Chen

Source: Nanomaterials, Vol 13, Iss 4, p 673 (2023)

Subject Terms: photodynamic therapy, nanoparticle, X-ray activated, deep tissue, reactive oxygen species, dosimetry, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.mdpi.com/2079-4991/13/4/673; https://doaj.org/toc/2079-4991

Access URL: https://doaj.org/article/a72c74d1fa3a445982e75c854b77d986

A New Model of Spontaneous Colitis in Mice Induced by Deletion of an RNA m6A Methyltransferase Component METTL14 in T CellsSummary

Authors: Thomas X. Lu, Zhong Zheng, Linda Zhang, Hui-Lung Sun, Marc Bissonnette, Haochu Huang, Chuan He

Source: Cellular and Molecular Gastroenterology and Hepatology, Vol 10, Iss 4, Pp 747-761 (2020)

Subject Terms: Inflammatory Bowel Disease, RNA m6A Methylation, Mouse Colitis Model, Regulatory T Cells, Diseases of the digestive system. Gastroenterology, RC799-869

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352345X20301077; https://doaj.org/toc/2352-345X

Access URL: https://doaj.org/article/19c1082175ca42b39261e01a6e107e4e

Early increase in blood supply (EIBS) is associated with tumor risk in the Azoxymethane model of colon cancer

Authors: Sarah Ruderman, Adam Eshein, Vesta Valuckaite, Urszula Dougherty, Anas Almoghrabi, Andrew Gomes, Ajaypal Singh, Baldeep Pabla, Hemant K. Roy, John Hart, Marc Bissonnette, Vani Konda, Vadim Backman

Source: BMC Cancer, Vol 18, Iss 1, Pp 1-13 (2018)

Subject Terms: Colorectal cancer, Early increase in blood supply, Angiogenesis, Renin angiotensin system, Field effect of carcinogenesis, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12885-018-4709-7; https://doaj.org/toc/1471-2407

Access URL: https://doaj.org/article/715f21192ac84651976d37496ce31d43

Epigenetic DNA Modifications Upregulate SPRY2 in Human Colorectal Cancers

Authors: Alexei J. Stuckel, Shuai Zeng, Zhen Lyu, Wei Zhang, Xu Zhang, Urszula Dougherty, Reba Mustafi, Qiong Zhang, Trupti Joshi, Marc Bissonnette, Samrat Roy Choudhury, Sharad Khare

Source: Cells, Vol 10, Iss 10, p 2632 (2021)

Subject Terms: colorectal cancer, DNA methylation, epigenetic regulation, SPRY2 gene expression, 5-hydroxymethylcytosine, CTCF transcription factor, Cytology, QH573-671

File Description: electronic resource

Relation: https://www.mdpi.com/2073-4409/10/10/2632; https://doaj.org/toc/2073-4409

Access URL: https://doaj.org/article/7fdf92d5c6ff403b94cd6780e8fa8c7c

Salmonella Protein AvrA Activates the STAT3 Signaling Pathway in Colon Cancer

Authors: Rong Lu, Shaoping Wu, Yong-guo Zhang, Yinglin Xia, Zhongren Zhou, Ikuko Kato, Hui Dong, Marc Bissonnette, Jun Sun

Source: Neoplasia: An International Journal for Oncology Research, Vol 18, Iss 5, Pp 307-316 (2016)

Subject Terms: Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1476558616300082; https://doaj.org/toc/1476-5586; https://doaj.org/toc/1522-8002

Access URL: https://doaj.org/article/888e8c8a488e4d06bf8f7099a216786d

Northern Latitude but Not Season Is Associated with Increased Rates of Hospitalizations Related to Inflammatory Bowel Disease: Results of a Multi-Year Analysis of a National Cohort.

Authors: Adam C Stein, John Nick Gaetano, Jeffrey Jacobs, Rangesh Kunnavakkam, Marc Bissonnette, Joel Pekow

Source: PLoS ONE, Vol 11, Iss 8, p e0161523 (2016)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC5007007?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/44267102ac1445b2a87858ad44ae488a

X-Ray Fluorescence Microscopy Demonstrates Preferential Accumulation of a Vanadium-Based Magnetic Resonance Imaging Contrast Agent in Murine Colonic Tumors

Authors: Devkumar Mustafi, Jesse Ward, Urszula Dougherty, Marc Bissonnette, John Hart, Stefan Vogt, Gregory S. Karczmar

Source: Molecular Imaging, Vol 14 (2015)

Subject Terms: Biology (General), QH301-705.5, Medical technology, R855-855.5

File Description: electronic resource

Relation: https://doaj.org/toc/1536-0121

Access URL: https://doaj.org/article/8fe2ca56e4b34f7fbd6a3b7385b2a339

TU-100 (Daikenchuto) and ginger ameliorate anti-CD3 antibody induced T cell-mediated murine enteritis: microbe-independent effects involving Akt and NF-κB suppression.

Authors: Nobuhiro Ueno, Takumu Hasebe, Atsushi Kaneko, Masahiro Yamamoto, Mikihiro Fujiya, Yutaka Kohgo, Toru Kono, Chong-Zhi Wang, Chun-Su Yuan, Marc Bissonnette, Eugene B Chang, Mark W Musch

Source: PLoS ONE, Vol 9, Iss 5, p e97456 (2014)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4032249?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/3f79822e0297416b9dd0ba3b8a03e641

The microbe-derived short chain fatty acid butyrate targets miRNA-dependent p21 gene expression in human colon cancer.

Authors: Shien Hu, Tien Sy Dong, Sushila R Dalal, Feng Wu, Marc Bissonnette, John H Kwon, Eugene B Chang

Source: PLoS ONE, Vol 6, Iss 1, p e16221 (2011)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3024403?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/218a7a8a1c52418298ae8a0da71bd4c7

Sorafenib Triggers Antiproliferative and Pro-Apoptotic Signals in Human Esophageal Adenocarcinoma Cells.

Authors: Jorge-Shmuel Delgado, Reba Mustafi, Jason Yee, Sonia Cerda, Anusara Chumsangsri, Urszula Dougherty, Lev Lichtenstein, Alessandro Fichera, Marc Bissonnette

Source: Digestive Diseases & Sciences; Dec2008, Vol. 53 Issue 12, p3055-3064, 10p

Subject Terms: ANTINEOPLASTIC agents, ESOPHAGEAL cancer, ADENOCARCINOMA, ENZYME inhibitors, CANCER cell growth regulation, CANCER cell proliferation, PATIENTS

Intravenous Regional Anesthesia Administered by the Operating Plastic Surgeon: Is It Safe and Efficient? Experience of a Medical Center: 91.

Authors: S J Bou-Merhi, Alain Gagnon, Marc Bissonnette, Jean-Yves St. Laurent, André Chollet

Source: Plastic & Reconstructive Surgery; Sep2005, Vol. 116 Issue 3, p109-111, 3p