Augmented Mycobiome-Based Cancer Detection by an Interpretable Large Model

Authors: He, Dongmei, Yang, Xin, Zhan, Buchao, Zhang, Zilong, Zhang, Qingchen, Yan, Shankai

Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :925-931 Dec, 2024

Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Fungal community change in selected fluvisols under simulated flooding condition.

Authors: Furtak, Karolina¹ kfurtak@iung.pulawy.pl, Grządziel, Jarosław¹

Source: Polish Journal of Agronomy. 2023, Vol. 52, p31-43. 13p.

Subject Terms: *MYCOBIOME, *SOIL fungi, *FLUVISOLS, *SOIL microbiology, *SOIL moisture, *FLOODS, *BIOGEOCHEMISTRY

The hidden universe of human milk microbiome: origin, composition, determinants, role, and future perspectives.

Authors: Consales, Alessandra¹, Cerasani, Jacopo¹, Sorrentino, Gabriele², Morniroli, Daniela^1,2 daniela.morniroli@gmail.com, Colombo, Lorenzo^1,2, Mosca, Fabio^1,2, Giannì, Maria Lorella^1,2

Source: European Journal of Pediatrics. May2022, Vol. 181 Issue 5, p1811-1820. 10p. 1 Color Photograph, 2 Charts.

Subject Terms: *HUMAN microbiota, *MYCOBIOME, *FUNGI, *YEAST, *VIRUSES, *MICROORGANISMS

Exploring the female genital tract mycobiome in young South African women using metaproteomics

Authors: Tamlyn K. Gangiah, Arghavan Alisoltani, Matthys Potgieter, Liam Bell, Elizabeth Ross, Arash Iranzadeh, Zac McDonald, Imane Allali, Smritee Dabee, Shaun Barnabas, Jonathan M. Blackburn, David L. Tabb, Linda-Gail Bekker, Heather B. Jaspan, Jo-Ann S. Passmore, Nicola Mulder, Lindi Masson

Source: Microbiome, Vol 13, Iss 1, Pp 1-22 (2025)

Subject Terms: Mycobiome, Metaproteomics, Female genital tract, Bacterial vaginosis, Fungi, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/336b1b964a404142bce589a1f7c44ea3

Discovering the dynamics of peach fruit mycobiome throughout fruit development season by high-throughput sequencing

Authors: Sibel Öncel, Hilal Özkılınç

Source: Scientific Reports, Vol 15, Iss 1, Pp 1-13 (2025)

Subject Terms: Fruit mycobiome, Fungal diversity, Prunus persica, Metabarcoding, Bioinformatics, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/2f520f024aec4b3da1a4db4aef75a7e5

Distinct airway mycobiome signature in patients with pulmonary hypertension and subgroups

Authors: Chenting Zhang, Bihua Zhong, Qian Jiang, Wenju Lu, Hongkai Wu, Yue Xing, Xuefen Wu, Zizhou Zhang, Yulin Zheng, Peiwen Li, Zhenxiang Li, Ziying Lin, Yuqin Chen, Cheng Hong, Zhuxiang Zhao, Tingting Zhang, Weiquan Liang, Yi Zhang, Caojin Zhang, Jason X.-J. Yuan, Chunli Liu, Jian Wang, Kai Yang

Source: BMC Medicine, Vol 23, Iss 1, Pp 1-18 (2025)

Subject Terms: Airway, Fungus, Microbiome, Mycobiome, Pulmonary hypertension, Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/1741-7015

Access URL: https://doaj.org/article/be9823fd0109488bb920671cb717c4e5

Challenges in capturing the mycobiome from shotgun metagenome data: lack of software and databases

Authors: Ekaterina Avershina, Arfa Irej Qureshi, Hanne C. Winther-Larsen, Trine B. Rounge

Source: Microbiome, Vol 13, Iss 1, Pp 1-11 (2025)

Subject Terms: Mycobiome, Microbiome, Shotgun metagenome sequencing, Software, Databases, Fungi, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/d6704855542b4690b20b9b2236b35634

Airway Microbiota Profiles in Children With and Without Asthma: A Comparative Study

Authors: Alamri A, Alhassan M, Almutairi AK, Jayaseeli N, Berg RP, Stensvold CR, Andersen LO, Nielsen HV, AlKhater SA

Source: Journal of Asthma and Allergy, Vol Volume 18, Pp 349-361 (2025)

Subject Terms: pediatrics asthma, 16s rrna, 18s rrna, dna metabarcoding, microbiome, microbiota, mycobiome, Immunologic diseases. Allergy, RC581-607

File Description: electronic resource

Relation: https://www.dovepress.com/airway-microbiota-profiles-in-children-with-and-without-asthma-a-compa-peer-reviewed-fulltext-article-JAA; https://doaj.org/toc/1178-6965

Access URL: https://doaj.org/article/35b684034b154345b2a5a48378791add

Exploring correlations between gut mycobiome and lymphocytes in melanoma patients undergoing anti-PD-1 therapy

Authors: Natalia Szóstak, Michał Budnik, Katarzyna Tomela, Luiza Handschuh, Anna Samelak-Czajka, Bernadeta Pietrzak, Marcin Schmidt, Mariusz Kaczmarek, Łukasz Galus, Jacek Mackiewicz, Andrzej Mackiewicz, Piotr Kozlowski, Anna Philips

Source: Cancer Immunology, Immunotherapy, Vol 74, Iss 4, Pp 1-19 (2025)

Subject Terms: Melanoma, Gut mycobiome, Immune response, Lymphocytes, Anti-PD-1, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1432-0851

Access URL: https://doaj.org/article/8c01ee886ed24370bca0b72a05cb3175

Impact of diet on the gut mycobiome of Hong Kong Chinese infants

Authors: Jordan Yik Hei Fong, Kris Yuet Wan Lok, Man Lung Yeung, Wing Ho Li, Patrick Chiu Yat Woo, Jade Lee Lee Teng

Source: Computational and Structural Biotechnology Journal, Vol 27, Iss , Pp 661-671 (2025)

Subject Terms: Hong Kong Chinese infants, Diet, Gut, Mycobiome, Fungi, Breastmilk, Biotechnology, TP248.13-248.65

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2001037025000339; https://doaj.org/toc/2001-0370

Access URL: https://doaj.org/article/47277dd399d64318adb1b1b830813e8f

Gut fungal profile in new onset treatment-naïve ulcerative colitis in Saudi children

Authors: Mohammad El Mouzan, Abdulaziz Al Quorain, Asaad Assiri, Abdullah Almasoud, Badr Alsaleem, Ahmed Aladsani, Ahmed Al Sarkhy

Source: The Saudi Journal of Gastroenterology, Vol 31, Iss 1, Pp 28-33 (2025)

Subject Terms: ibd, mycobiome, saudi, children, ulcerative colitis, Diseases of the digestive system. Gastroenterology, RC799-869

File Description: electronic resource

Relation: https://journals.lww.com/10.4103/sjg.sjg_221_24; https://doaj.org/toc/1319-3767; https://doaj.org/toc/1998-4049

Access URL: https://doaj.org/article/a0a39b330eaa4555962ebb38d2ee7aaf

The mycobiome in human cancer: analytical challenges, molecular mechanisms, and therapeutic implications

Authors: Ting Ding, Chang Liu, Zhengyu Li

Source: Molecular Cancer, Vol 24, Iss 1, Pp 1-26 (2025)

Subject Terms: Mycobiome, Fungi, Cancer pathogenesis, Cancer therapy, Tumor immunology, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1476-4598

Access URL: https://doaj.org/article/20f05d7cf86a4aa489c43cb5f1a6ff6a

Dysbiosis of the human skin mycobiome in patients receiving systemic IL-23 inhibitors

Authors: Yuta Koike, Sayaka Kuwatsuka, Daisuke Motooka, Hiroyuki Murota

Source: Allergology International, Vol 74, Iss 1, Pp 72-77 (2025)

Subject Terms: Biologics, Dysbiosis, IL-23, Malassezia, Mycobiome, Immunologic diseases. Allergy, RC581-607

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1323893024000807; https://doaj.org/toc/1323-8930

Access URL: https://doaj.org/article/e4011e1b67954c40884151644784059a

Temporal dynamics in the composition of metabolically active bacteria and fungi in the ileo-cecal lymph nodes of suckling and newly weaned piglets

Authors: Barbara U. Metzler-Zebeli, Frederike Lerch, Fitra Yosi, Julia C. Vötterl, Simone Koger, Jutamat Klinsoda

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-13 (2024)

Subject Terms: Ileo-cecal lymph nodes, Bacteriome, Mycobiome, Neonatal piglets, Microbial translocation, Weaning, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/784eb3cbd8ed47d9a58f8a44280d294d

Microbiome and Mycobiome Analyses of Continuous Positive Airway Pressure Devices

Authors: Hyun Jin Min, Bo-Yun Choi, Woo Jun Sul, Hyung-Ju Cho

Source: Clinical and Experimental Otorhinolaryngology, Vol 17, Iss 4, Pp 292-301 (2024)

Subject Terms: continuous positive airway pressure device, microbiome, mycobiome, obstructive sleep apnea, Medicine, Otorhinolaryngology, RF1-547

File Description: electronic resource

Relation: http://e-ceo.org/upload/pdf/ceo-2024-00167.pdf; https://doaj.org/toc/1976-8710; https://doaj.org/toc/2005-0720

Access URL: https://doaj.org/article/12d15947789b4dcbb793c57a5c58de65

Fungal Communities Shift with Soybean Cyst Nematode Abundance in Soils

Authors: Melanie Medina López, Horacio D. Lopez-Nicora, Maria Soledad Benitez Ponce

Source: Phytobiomes Journal, Vol 8, Iss 4, Pp 568-577 (2024)

Subject Terms: mycobiome, plant parasitic nematodes, soil fungi, soybean, soybean cyst nematode, Plant culture, SB1-1110, Microbial ecology, QR100-130, Plant ecology, QK900-989

File Description: electronic resource

Relation: https://doaj.org/toc/2471-2906

Access URL: https://doaj.org/article/6879cb5469484c24bd4a736035c47992

Analyses of Fungal Communities from Culture-Dependent and -Independent Studies Reveal Novel Mycobiomes Associated with Globodera and Heterodera Species

Authors: Blaise Jumbam, Zahra-Bita Amiri, Louise-Marie Dandurand, Inga A. Zasada, M. Catherine Aime

Source: Phytobiomes Journal, Vol 8, Iss 4, Pp 621-642 (2024)

Subject Terms: alpha diversity, core fungal communities, mycobiome analysis, nematophagous fungi, next-generation sequencing, Plant culture, SB1-1110, Microbial ecology, QR100-130, Plant ecology, QK900-989

File Description: electronic resource

Relation: https://doaj.org/toc/2471-2906

Access URL: https://doaj.org/article/abb91ea679984ad5a19149dd011361be

Functional diversity of the above-ground fungal community under long-term integrated, organic and biodynamic Vineyard Management

Authors: Katharina Steng, Friederike Roy, Harald Kellner, Julia Moll, Susanne Tittmann, Johanna Frotscher, Johanna Döring

Source: Environmental Microbiome, Vol 19, Iss 1, Pp 1-16 (2024)

Subject Terms: Management systems, Mycobiome, Microorganisms, Grapevine, Vitis vinifera, Environmental sciences, GE1-350, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2524-6372

Access URL: https://doaj.org/article/77e282eeaa5d4ee89aaf8c31c34e34c8

Depletion of core microbiome forms the shared background against diverging dysbiosis patterns in Crohn’s disease and intestinal tuberculosis: insights from an integrated multi-cohort analysis

Authors: Aditya Bajaj, Manasvini Markandey, Amit Samal, Sourav Goswami, Sudheer K. Vuyyuru, Srikant Mohta, Bhaskar Kante, Peeyush Kumar, Govind Makharia, Saurabh Kedia, Tarini Shankar Ghosh, Vineet Ahuja

Source: Gut Pathogens, Vol 16, Iss 1, Pp 1-22 (2024)

Subject Terms: Gut inflammatory disorders, Crohn’s disease, Intestinal tuberculosis, Gut microbiome, Mycobiome, Dysbiosis, Diseases of the digestive system. Gastroenterology, RC799-869

File Description: electronic resource

Relation: https://doaj.org/toc/1757-4749

Access URL: https://doaj.org/article/3d664c46c9c243fba03c604f68091470

The airborne mycobiome and associations with mycotoxins and inflammatory markers in the Norwegian grain industry.

Authors: Straumfors, Anne¹ anne.straumfors@stami.no, Mundra, Sunil², Foss, Oda A. H.¹, Mollerup, Steen K.¹, Kauserud, Håvard³

Source: Scientific Reports. 4/30/2021, Vol. 11 Issue 1, p1-14. 14p.

Subject Terms: *MYCOBIOME, *MYCOTOXINS, *GRAIN trade, *ANIMAL feeding, *GLUCANS