Metabolomic and genomic insights into Micromonospora carbonacea subsp. caeruleus for anti-colorectal compound.

Authors: Kongsaya, Tepakorn^1,2, Emthomya, Nuttaporn^1,2, Ngamcharungchit, Chananan^1,2, Aroonsri, Aiyada³, Uawisetwathana, Umaporn³, Pruksatrakul, Thapanee³, Euanorasetr, Jirayut⁴, Intra, Bungonsiri^1,2, Bungonsiri.int@mahidol.edu

Source: Applied Microbiology & Biotechnology; 2/25/2025, Vol. 109 Issue 1, p1-19, 19p

Metabolic pathways of Alternative Lengthening of Telomeres in pan-carcinoma.

Authors: Armendáriz-Castillo, Isaac^1,2 (AUTHOR) Isaac.arcas@gmail.com, García-Cárdenas, Jennyfer¹ (AUTHOR), Espinosa, Pamela³ (AUTHOR), Hidalgo-Fernández, Katherine¹ (AUTHOR), Peña-Zúñiga, Lizbeth¹ (AUTHOR), Martínez, Ronie^1,4 (AUTHOR), Moromenacho, Juan^1,4 (AUTHOR), Herrera-Yela, Andrés^5,6 (AUTHOR), Cruz-Varela, Jonathan⁷ (AUTHOR), Saucedo-Sariñana, Anilú⁸ (AUTHOR), Cerdán, María-Esperanza² (AUTHOR), López-Cortés, Andrés⁹ (AUTHOR) alc84@gmail.com, Guerrero, Santiago¹ (AUTHOR) ssaguerreroji@uide.edu.ec

Source: PLoS ONE. 2/21/2025, Vol. 20 Issue 2, p1-15. 15p.

Subject Terms: *METHIONINE metabolism, *METABOLOMICS, *DATA integration, *TELOMERES, *METABOLITES

Microbiota–Gut–Brain Axis: Mass-Spectrometry-Based Metabolomics in the Study of Microbiome Mediators—Stress Relationship.

Authors: Interino, Nicolò¹ (AUTHOR) nicolo.interino@ausl.bologna.it, Vitagliano, Rosalba¹ (AUTHOR) rosalba.vitagliano@ausl.bologna.it, D'Amico, Federica² (AUTHOR) federica.damico8@unibo.it, Lodi, Raffaele¹ (AUTHOR) raffaele.lodi@ausl.bologna.it, Porru, Emanuele³ (AUTHOR) emanuele.porru2@unibo.it, Turroni, Silvia² (AUTHOR) silvia.turroni@unibo.it, Fiori, Jessica^1,4 (AUTHOR) jessica.fiori@unibo.it

Source: Biomolecules (2218-273X). Feb2025, Vol. 15 Issue 2, p243. 28p.

Subject Terms: *METABOLOMICS, *TELECOMMUNICATION systems, *METABOLITES, *MOLECULES, *INTESTINES

Recent Web Platforms for Multi-Omics Integration Unlocking Biological Complexity.

Authors: Papadaki, Eugenia^1,2, epapadaki@ionio.grspalamas@ionio.grvlamos@ionio.gr, Kakkos, Ioannis^3,4, ikakkos@biomed.ntua.gr, Vlamos, Panagiotis^1,2, Petropoulou, Ourania³, rpetro@biomed.ntua.gr, Miloulis, Stavros T.³, smiloulis@biomed.ntua.gr, Palamas, Stergios², Vrahatis, Aristidis G.^1,2, epapadaki@ionio.gr

Source: Applied Sciences (2076-3417); Jan2025, Vol. 15 Issue 1, p329, 21p

Multi-Omics Assessment of Puff Volume-Mediated Salivary Biomarkers of Metal Exposure and Oxidative Injury Associated with Electronic Nicotine Delivery Systems.

Authors: Xiaojia He¹, Meister, Maureen¹, Jeon, Jennifer¹, Shinde, Akshada², Qian Zhang¹, Chepaitis, Patrick¹, Black, Marilyn¹, Shannahan, Jonathan², jshannah@purdue.edu, Wright, Christa¹, Christa.Wright@ul.org

Source: Environmental Health Perspectives; Jan2025, Vol. 133 Issue 1, p017005-1-017005-21, 21p

Integration of metabolomics and other omics: from microbes to microbiome.

Authors: Go, Daewon¹, Yeon, Gun-Hwi^2,3, Park, Soo Jin⁴, Lee, Yujin^1,5, Koh, Hyun Gi⁶, Koo, Hyunjin^1,5, Kim, Kyoung Heon⁷, Jin, Yong-Su⁸, Sung, Bong Hyun^2,3, bhsung@kribb.re.kr, Kim, Jungyeon^1,5, kim131812@snu.ac.kr

Source: Applied Microbiology & Biotechnology; 12/19/2024, Vol. 108 Issue 1, p1-7, 7p

Applications of Artificial Intelligence in Microbiome Analysis and Probiotic Interventions—An Overview and Perspective Based on the Current State of the Art.

Authors: D'Urso, Fabiana¹, fabiana.durso@unisalento.it, Broccolo, Francesco¹, fabiana.durso@unisalento.it

Source: Applied Sciences (2076-3417); Oct2024, Vol. 14 Issue 19, p8627, 10p

Difference Analysis of White, Red, and Grey Sufu: Crosstalk between Metabolomics, Proteomics, and Microbiomics.

Authors: Zhang, Chenning¹ (AUTHOR), Li, Ying² (AUTHOR), He, Tao³ (AUTHOR), Sun, Mo⁴ (AUTHOR), Shao, Yuanyang⁵ (AUTHOR) 19801213627@163.com, He, Rong (AUTHOR)

Source: Journal of Food Biochemistry. 9/4/2024, Vol. 2024, p1-14. 14p.

Subject Terms: Metabolites, Metabolomics, Proteomics, Amino acids, Enterobacter, Microbial metabolites

Rifaximin ameliorates influenza A virus infection-induced lung barrier damage by regulating gut microbiota.

Authors: Zhang, Yijia¹, Chen, Yafei¹, Xia, Jun², Li, Li¹, Chang, Lifeng¹, Luo, Haowei¹, Ping, Jihui³, Qiao, Wenna¹, Su, Juan¹, sujuan@njau.edu.cn

Source: Applied Microbiology & Biotechnology; 9/19/2024, Vol. 108 Issue 1, p1-16, 16p

Metabolomics-Assisted Breeding in Oil Palm: Potential and Current Perspectives.

Authors: Nugroho, Rizki Anjal P.^1,2 (AUTHOR) rizkianjalpuji.nugroho@etud.univ-angers.fr, Zaag, Ismail^1,3,4 (AUTHOR) emmanuelle.lamade@cirad.fr, Lamade, Emmanuelle^3,4,5 (AUTHOR), Lukman, Rudy² (AUTHOR) j.p.caliman@sinarmas-agri.com, Caliman, Jean-Pierre² (AUTHOR), Tcherkez, Guillaume^1,5 (AUTHOR) guillaume.tcherkez@anu.edu.au

Source: International Journal of Molecular Sciences. Sep2024, Vol. 25 Issue 18, p9833. 13p.

Subject Terms: *OIL palm, *METABOLOMICS, *GANODERMA, *CROPS, *PETROLEUM

Untargeted metabolomic analysis of human milk from healthy mothers reveals drivers of metabolite variability.

Authors: Holmes, Zachary C.¹, Koivusaari, Katariina¹, O'Brien, Claire E.¹, Richeson, Katherine V.¹, Strickland, Leila I.¹ leila.strickland@biomilq.com

Source: Scientific Reports. 9/6/2024, Vol. 14 Issue 1, p1-11. 11p.

Subject Terms: *BREAST milk, *METABOLOMICS, *MATERNAL age, *INFANT nutrition, *MOTHERS, *CELL metabolism, *INFANT formulas

PFAS Levels, Early Life Factors, and Mammographic Breast Density in Premenopausal Women.

Authors: Ning, Yitao S.¹, Getz, Kayla R.¹, Kyeyune, Joy K.², Myung Sik Jeon^1,3, Chongliang Luo^1,3, Jingqin Luo^1,3, Toriola, Adetunji T.^1,4, a.toriola@wustl.edu

Source: Environmental Health Perspectives; Sep2024, Vol. 132 Issue 9, p097008-1-097008-9, 9p

Proteome and metabolomic profile of Mongolian horse follicular fluid during follicle development.

Authors: Li, Xinyu¹, Du, Ming¹, Liu, Yuanyi¹, Wang, Min¹, Shen, Yingchao¹, Xing, Jingya², Zhang, Lei¹, Zhao, Yiping¹, Bou, Gerelchimeg¹, Bai, Dongyi¹, Dugarjaviin, Manglai¹ dmanglai@163.com, Xia, Wei³ Xia.xiaweihawaii@163.com

Source: Scientific Reports. 8/26/2024, Vol. 14 Issue 1, p1-11. 11p.

Subject Terms: *METABOLOMICS, *COMBINATORICS, *LINOLEIC acid, *HORSES, *FLUIDS

Identification of Chagas disease biomarkers using untargeted metabolomics.

Authors: Herreros-Cabello, Alfonso^1,2, Bosch-Nicolau, Pau^3,4,5, Pérez-Molina, José A.^4,6, Salvador, Fernando^3,4,5, Monge-Maillo, Begoña^4,6, Rodriguez-Palomares, Jose F.^5,7,8, Ribeiro, Antonio Luiz Pinho⁹, Sánchez-Montalvá, Adrián^3,4,5, Sabino, Ester Cerdeira¹⁰, Norman, Francesca F.^4,6, Fresno, Manuel^1,2,11,12, Gironès, Núria^1,2,11,12, Molina, Israel^3,4,5 israel.molina@vallhebron.cat

Source: Scientific Reports. 8/13/2024, Vol. 14 Issue 1, p1-11. 11p.

Subject Terms: *CHAGAS' disease, *METABOLOMICS, *NEGLECTED diseases, *BIOMARKERS, *BILIVERDIN

Effects of Early Life Exposures to the Aryl Hydrocarbon Receptor Ligand TCDF on Gut Microbiota and Host Metabolic Homeostasis in C57BL/6J Mice.

Authors: Yuan Tian^1,2, Rimal, Bipin¹, Bisanz, Jordan E.^3,4, Wei Gui², Wolfe, Trenton M.⁵, Imhoi Koo¹, Murray, Iain A.¹, Nettleford, Shaneice K.¹, Shigetoshi Yokoyama¹, Fangcong Dong¹, Sergei Koshkin², Prabhu, K. Sandeep¹, Turnbaugh, Peter J.^4,6, Walk, Seth T.⁵, Perdew, Gary H.¹, Patterson, Andrew D.¹, adp117@psu.edu

Source: Environmental Health Perspectives; Aug2024, Vol. 132 Issue 8, p087005-1-087005-14, 14p

MetSCORE: a molecular metric to evaluate the risk of metabolic syndrome based on serum NMR metabolomics.

Authors: Gil-Redondo, Rubén¹ (AUTHOR), Conde, Ricardo¹ (AUTHOR), Bruzzone, Chiara¹ (AUTHOR), Seco, Maria Luisa² (AUTHOR), Bizkarguenaga, Maider¹ (AUTHOR), González-Valle, Beatriz¹ (AUTHOR), de Diego, Angela¹ (AUTHOR), Laín, Ana¹ (AUTHOR), Habisch, Hansjörg³ (AUTHOR), Haudum, Christoph⁴ (AUTHOR), Verheyen, Nicolas⁵ (AUTHOR), Obermayer-Pietsch, Barbara⁴ (AUTHOR), Margarita, Sara⁶ (AUTHOR), Pelusi, Serena⁶ (AUTHOR), Verde, Ignacio⁷ (AUTHOR), Oliveira, Nádia⁷ (AUTHOR), Sousa, Adriana⁷ (AUTHOR), Zabala-Letona, Amaia^8,9,10 (AUTHOR), Santos-Martin, Aida^9,10,11 (AUTHOR), Loizaga-Iriarte, Ana^9,10,11 (AUTHOR)

Source: Cardiovascular Diabetology. 7/24/2024, Vol. 23 Issue 1, p1-13. 13p.

Subject Terms: *METABOLIC syndrome, *METABOLOMICS, *INSULIN resistance, *HYPERTENSION, *METABOLIC models

Exploring the Mechanism of H 2 S Synthesis in Male Bactrian Camel Poll Glands Based on Data Independent Acquisition Proteomics and Non-Targeted Metabolomics.

Authors: Yuan, Bao^1,2 (AUTHOR) 17693462916@163.com, Zhang, Quanwei^1,2,3 (AUTHOR) d.wt2008@163.com, Zhang, Bohao^2,3 (AUTHOR), Li, Jianfu^1,2 (AUTHOR) c2593840952@163.com, Chen, Wenli^1,2 (AUTHOR) zhaoyudc@163.com, Zhao, Yu^1,2 (AUTHOR) zhangyong@gsau.edu.cn, Dong, Weitao^2,3 (AUTHOR), Zhang, Yong^1,2,3 (AUTHOR) zhaoxx@gsau.edu.cn, Zhao, Xingxu^1,2,3 (AUTHOR), Gao, Yuan^1,2 (AUTHOR) zhangqw@gsau.edu.cn

Source: International Journal of Molecular Sciences. Jul2024, Vol. 25 Issue 14, p7700. 16p.

Subject Terms: *ESTRUS, *METABOLOMICS, *CAMELS, *GLANDS, *GAS chromatography/Mass spectrometry (GC-MS), *PROTEOMICS, *ACQUISITION of data

Multi-Omics Approaches in Oil Palm Research: A Comprehensive Review of Metabolomics, Proteomics, and Transcriptomics Based on Low-Temperature Stress.

Authors: John Martin, Jerome Jeyakumar^1,2 (AUTHOR) jeromejeyakumarj@gmail.com, Song, Yuqiao^1,2,3 (AUTHOR) 17638596793@163.com, Hou, Mingming^1,2,3 (AUTHOR) asd974692216@163.com, Zhou, Lixia^1,2 (AUTHOR) lxzhou@catas.cn, Liu, Xiaoyu^1,2 (AUTHOR) liuxy86@catas.cn, Li, Xinyu^1,2 (AUTHOR) lixinyu@catas.cn, Fu, Dengqiang^1,2 (AUTHOR) fudq@catas.cn, Li, Qihong^1,2 (AUTHOR) liqihong@catas.cn, Cao, Hongxing^1,2 (AUTHOR) caohx@catas.cn, Li, Rui^1,2 (AUTHOR) caohx@catas.cn

Source: International Journal of Molecular Sciences. Jul2024, Vol. 25 Issue 14, p7695. 19p.

Subject Terms: *METABOLOMICS, *OIL palm, *MULTIOMICS, *PHYSIOLOGICAL effects of cold temperatures, *TRANSCRIPTOMES, *PROTEOMICS, *OILSEED plants, *PLANTATIONS

Maternal Serum Metabolomics in Mid-Pregnancy Identifies Lipid Pathways as a Key Link to Offspring Obesity in Early Childhood.

Authors: Francis, Ellen C.¹ (AUTHOR) ellen.francis@rutgers.edu, Kechris, Katerina² (AUTHOR) katerina.kechris@cuanschutz.edu, Johnson, Randi K.^3,4 (AUTHOR) dana.dabelea@cuanschutz.edu, Rawal, Shristi⁵ (AUTHOR) shristi.rawal@rutgers.edu, Pathmasiri, Wimal^6,7 (AUTHOR) wimal_pathmasiri@unc.edu, Rushing, Blake R.^6,7 (AUTHOR) blake_rushing@unc.edu, Du, Xiuxia⁸ (AUTHOR) xiuxia.du@charlotte.edu, Jansson, Thomas⁹ (AUTHOR) thomas.jansson@cuanschutz.edu, Dabelea, Dana^4,10 (AUTHOR) wei.perng@cuanschutz.edu, Sumner, Susan J.^6,7 (AUTHOR) ellen.francis@rutgers.edu, Perng, Wei^4,10 (AUTHOR)

Source: International Journal of Molecular Sciences. Jul2024, Vol. 25 Issue 14, p7620. 15p.

Subject Terms: *CHILDHOOD obesity, *METABOLOMICS, *GESTATIONAL diabetes, *FREE fatty acids, *PREGNANCY, *PREGNANT women, *METABOLIC disorders, *POLYMER networks

Integrated proteomic and metabolomic profiling reveals novel insights on the inflammation and immune response in HFpEF.

Authors: Abudurexiti, Muyashaer¹ (AUTHOR), Abuduhalike, Refukaiti¹ (AUTHOR), Naman, Tuersunjiang¹ (AUTHOR), Wupuer, Nuerdun¹ (AUTHOR), Duan, Dongqin¹ (AUTHOR), Keranmu, Mayire¹ (AUTHOR), Mahemuti, Ailiman¹ (AUTHOR) xinjiangailiman@163.com

Source: BMC Genomics. 7/8/2024, Vol. 25 Issue 1, p1-8. 8p.

Subject Terms: *HEART failure, *METABOLOMICS, *IMMUNE response, *PROTEOMICS, *AFRICAN trypanosomiasis