Microbial occurrence and symbiont detection in a global sample of lichen metagenomes.

Authors: Gulnara Tagirdzhanova, Paul Saary, Ellen S Cameron, Carmen C G Allen, Arkadiy I Garber, David Díaz Escandón, Andrew T Cook, Spencer Goyette, Veera Tuovinen Nogerius, Alfredo Passo, Helmut Mayrhofer, Håkon Holien, Tor Tønsberg, Lisa Y Stein, Robert D Finn, Toby Spribille

Source: PLoS Biology, Vol 22, Iss 11, p e3002862 (2024)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1544-9173; https://doaj.org/toc/1545-7885

Access URL: https://doaj.org/article/aa08fbd65f7e4388b6cb09d03f634a27

Comparison of Nitrogen Oxide Metabolism Among Diverse Ammonia-Oxidizing Bacteria

Authors: Jessica Ann Kozlowski, K Dimitri Kits, Lisa Y Stein

Source: Frontiers in Microbiology, Vol 7 (2016)

Subject Terms: Nitric Oxide, Nitrogen Oxides, Nitrosomonas, Nitrous Oxide, Chemodenitrification, Nitrifier denitrification, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.01090/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/bd452958ee2f4b5a9bae97acdedaf508

Diverse electron sources support denitrification under hypoxia in the obligate methanotroph Methylomicrobium album strain BG8

Authors: K. Dimitri eKits, Dustin J Campbell, Albert eRemus Rosana, Lisa Y Stein

Source: Frontiers in Microbiology, Vol 6 (2015)

Subject Terms: Denitrification, Nitrous Oxide, hypoxia, methanotrophy, nitrite reduction, methane monooxygenase, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01072/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/ac61e96ea6f848b9bfdb43d793bfd74e

Characterization of denitrifying activity by the alphaproteobacterium, Sphingomonas wittichii RW1

Authors: Lisa Y Stein, Lynnie S Cua

Source: Frontiers in Microbiology, Vol 5 (2014)

Subject Terms: Denitrification, Nitrous Oxide, nitrite reductase, nitric oxide reductase, nirK, Sphingomonas wittichii RW1, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fmicb.2014.00404/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/cfcbf7e4d41844498ec23c9a34ec62a0

Energy-mediated versus ammonium-regulated gene expression in the obligate ammonia-oxidizing bacterium, Nitrosococcus oceani

Authors: Lisa Y Stein, Mark Alexander Campbell, Martin G Klotz

Source: Frontiers in Microbiology, Vol 4 (2013)

Subject Terms: Hydroxylamine, Microarray, signaling, ammonia-oxidizing bacteria, ammonium, redox, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fmicb.2013.00277/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/59c25e95e02c49a0b1b1538c19b16166

Global molecular analyses of methane metabolism in methanotrophic alphaproteobacterium, Methylosinus trichosporium OB3b. Part I: transcriptomic study

Authors: Janet B Matsen, Song eYang, Lisa Y Stein, David A. C. Beck, Marina G. Kalyuzhanaya

Source: Frontiers in Microbiology, Vol 4 (2013)

Subject Terms: methane metabolism, alphaproteobacterial methanotrophs, Methylosinus trichosporium OB3b, Serine cycle, EMC pathway, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fmicb.2013.00040/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/ec98b8d55b1b493abcc36c8c53f51a58

Enhancing nitrification at low temperature with zeolite in a mining operations retention pond

Authors: Misha eMiazga-Rodriguez, Sukkyun eHan, Brian eYakiwchuk, Kai eWei, Colleen eEnglish, Stephen eBourn, Seth eBohnet, Lisa Y Stein

Source: Frontiers in Microbiology, Vol 3 (2012)

Subject Terms: Mining, Nitrification, Biofilm, ammonia-oxidizing bacteria, cold environments, zeolite, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fmicb.2012.00271/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/38b636d2b2fa4ca3abc936f6507618d6

Grand challenges in terrestrial microbiology

Authors: Lisa Y Stein, Graeme W Nicol

Source: Frontiers in Microbiology, Vol 2 (2011)

Subject Terms: functional diversity, microbial ecology, Microbial Diversity, culturing, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fmicb.2011.00006/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/d5b1b95bb1ed410bac0709b9ffb3e8c0

Adaptations to submarine hydrothermal environments exemplified by the genome of Nautilia profundicola.

Authors: Barbara J Campbell, Julie L Smith, Thomas E Hanson, Martin G Klotz, Lisa Y Stein, Charles K Lee, Dongying Wu, Jeffrey M Robinson, Hoda M Khouri, Jonathan A Eisen, S Craig Cary

Source: PLoS Genetics, Vol 5, Iss 2, p e1000362 (2009)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC2628731?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/f1f7ea0c5def4184a8bd9c81ee88b730

Inoculum and pH effects on ammonium removal and microbial community dynamics in aquaponics systems

Authors: Peyman Derikvand, Brittany Sauter, Andrew Keddie, Lisa Y. Stein

Source: iScience, Vol 27, Iss 3, Pp 109073- (2024)

Subject Terms: Applied microbiology, Horticulture, Science

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2589004224002943; https://doaj.org/toc/2589-0042

Access URL: https://doaj.org/article/366cd050dfe54c48b08623b371d9588f

Dissolution and recovery of poly(3-hydroxybutyrate) in switchable solvents and the formation of a switchable gel

Authors: Mark Douglas Lawley, Lisa Y. Stein, Dominic Sauvageau

Source: Current Research in Green and Sustainable Chemistry, Vol 9, Iss , Pp 100421- (2024)

Subject Terms: Switchable solvents, Biodegradable polymers, Biopolymer, PHB, Recyclable solvents, Polymer gels, Chemistry, QD1-999

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2666086524000262; https://doaj.org/toc/2666-0865

Access URL: https://doaj.org/article/35b419b4cb3541c088b393935827219f

Optimization of Methane Feed and N:C Ratio for Biomass and Polyhydroxybutyrate Production by the Alphaproteobacterial Methanotroph Methylocystis sp. Rockwell

Authors: Hem K. Sharma, Dominic Sauvageau, Lisa Y. Stein

Source: Methane, Vol 1, Iss 4, Pp 355-364 (2022)

Subject Terms: methanotrophic bacteria, Methylocystis sp. Rockwell, N:C ratio, polyhydroxybutyrate, response surface methodology, single carbon bioconversion, Biochemistry, QD415-436, Geophysics. Cosmic physics, QC801-809

File Description: electronic resource

Relation: https://www.mdpi.com/2674-0389/1/4/26; https://doaj.org/toc/2674-0389

Access URL: https://doaj.org/article/b92efcce9fa746c582e2c0c6fa8cb63b

Low yield and abiotic origin of N2O formed by the complete nitrifier Nitrospira inopinata

Authors: K. Dimitri Kits (Centre for Microbiology and Environmental Systems Science, University of Vienna), Man-Young Jung (Centre for Microbiology and Environmental Systems Science, University of Vienna), Julia Vierheilig (Centre for Microbiology and Environmental Systems Science, University of Vienna), Petra Pjevac (Centre for Microbiology and Environmental Systems Science, University of Vienna), Christopher J. Sedlacek (Centre for Microbiology and Environmental Systems Science, University of Vienna), Shurong Liu (Centre for Microbiology and Environmental Systems Science, University of Vienna), Craig Herbold (Centre for Microbiology and Environmental Systems Science, University of Vienna), Lisa Y. Stein (Department of Biological Sciences, University of Alberta), Andreas Richter (Centre for Microbiology and Environmental Systems Science, University of Vienna), Holger Wissel (Institute of Bio- and Geosciences-Agrosphere (IBG-3), Forschungszentrum Jülich GmbH), Nicolas Brüggemann (Institute of Bio- and Geosciences-Agrosphere (IBG-3), Forschungszentrum Jülich GmbH), Michael Wagner (Centre for Microbiology and Environmental Systems Science, University of Vienna), Holger Daims (Centre for Microbiology and Environmental Systems Science, University of Vienna)

Availability: http://data.europeana.eu/aggregation/europeana/1300/https___phaidra_univie_ac_at_o_1168797

Comparative Proteomics of Three Species of Ammonia-Oxidizing Bacteria

Authors: Jackie K. Zorz (Department of Geoscience, University of Calgary), Jessica A. Kozlowski (Department of Ecogenomics and Systems Biology, Faculty of Life Sciences, University of Vienna), Lisa Y. Stein (Department of Biological Sciences, University of Alberta), Marc Strous (Department of Geoscience, University of Calgary), Manuel Kleiner (Department of Plant and Microbial Biology, North Carolina State University)

Availability: http://data.europeana.eu/aggregation/europeana/1300/https___phaidra_univie_ac_at_o_1033279

Nitrous oxide production by lithotrophic ammonia-oxidizing bacteria and implications for engineered nitrogen-removal systems.

Authors: Kartik Chandran¹, Lisa Y. Stein², Martin G. Klotz³, Mark C.M. van Loosdrecht⁴

Source: Biochemical Society Transactions. Dec2011, Vol. 39 Issue 6, p1832-1837. 6p.

Subject Terms: *NITROGEN removal (Water purification), *ATMOSPHERIC nitrous oxide, *NITROGEN cycle, *SEWAGE disposal plants, *DENITRIFICATION, *EMISSIONS (Air pollution)

Nitrifying and denitrifying pathways of methanotrophic bacteria.

Authors: Lisa Y. Stein¹, Martin G. Klotz²

Source: Biochemical Society Transactions. Dec2011, Vol. 39 Issue 6, p1826-1831. 6p.

Subject Terms: *ATMOSPHERIC nitrous oxide, *GREENHOUSE gases, *NITRIFYING bacteria, *ENZYMATIC analysis, *METABOLITES, *NITROGEN cycle, *METHANE

Microbial solutions must be deployed against climate catastrophe

Authors: Raquel Peixoto, Christian R. Voolstra, Lisa Y. Stein, Philip Hugenholtz, Joana Falcao Salles, Shady A. Amin, Max Häggblom, Ann Gregory, Thulani P. Makhalanyane, Fengping Wang, Nadège Adoukè Agbodjato, Yinzhao Wang, Nianzhi Jiao, Jay T. Lennon, Antonio Ventosa, Patrik M. Bavoil, Virginia Miller, Jack A. Gilbert

Source: mSystems, Vol 10, Iss 1 (2025)

Subject Terms: Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2379-5077

Access URL: https://doaj.org/article/373927a9e54946e08fa0667541695b3d

Microbial solutions must be deployed against climate catastrophe

Authors: Raquel Peixoto, Christian R. Voolstra, Lisa Y. Stein, Philip Hugenholtz, Joana Falcao Salles, Shady A. Amin, Max Häggblom, Ann Gregory, Thulani P. Makhalanyane, Fengping Wang, Nadège Adoukè Agbodjato, Yinzhao Wang, Nianzhi Jiao, Jay T. Lennon, Antonio Ventosa, Patrik M. Bavoil, Virginia Miller, Jack A. Gilbert

Source: npj Biofilms and Microbiomes, Vol 10, Iss 1, Pp 1-3 (2024)

Subject Terms: Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2055-5008

Access URL: https://doaj.org/article/4946c9d14fef403ab5f5883d3fdbd5c1

The influence of self-cycling fermentation long- and short-cycle schemes on Saccharomyces cerevisiae and Escherichia coli

Authors: Yusheng Tan, Lisa Y. Stein, Dominic Sauvageau

Source: Scientific Reports, Vol 12, Iss 1, Pp 1-12 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/f1dad6f949514cafa4d890034a6a5900

An altered microbiome in urban coyotes mediates relationships between anthropogenic diet and poor health

Authors: Scott Sugden, Dana Sanderson, Kyra Ford, Lisa Y. Stein, Colleen Cassady St. Clair

Source: Scientific Reports, Vol 10, Iss 1, Pp 1-14 (2020)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/477cd03e426442d7bd438e9dbd7e483c