Closing PFAS analytical gaps: Inter-method evaluation of total organofluorine techniques for AFFF-impacted water

Authors: Fuhar Dixit, Edmund H. Antell, Katharine A. Faber, Chuhui Zhang, Manmeet W. Pannu, Megan H. Plumlee, Jean Van Buren, Abraham Doroshow, William C.K. Pomerantz, William A. Arnold, Christopher P. Higgins, Graham F. Peaslee, Lisa Alvarez-Cohen, David L. Sedlak, Mohamed Ateia

Source: Journal of Hazardous Materials Letters, Vol 5, Iss , Pp 100122- (2024)

Subject Terms: PFASs, Analytical methods, LC/MS-MS, TOP assay, GC-MS/MS, Suspect screening, Hazardous substances and their disposal, TD1020-1066

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2666911024000212; https://doaj.org/toc/2666-9110

Access URL: https://doaj.org/article/770f12d832cd416dab1b82c92fdc2c5a

Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios

Authors: Christian White, Edmund Antell, Sarah L. Schwartz, Jennifer E. Lawrence, Ray Keren, Lijie Zhou, Ke Yu, Weiqin Zhuang, Lisa Alvarez-Cohen

Source: Frontiers in Microbiology, Vol 14 (2023)

Subject Terms: anammox, DNRA, denitrification, metagenome, stoichiometric ratio, bioreactor, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2023.1243410/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/4365f375698f4302ba0045acad3b574d

Global genomic analysis of microbial biotransformation of arsenic highlights the importance of arsenic methylation in environmental and human microbiomes

Authors: Ray Keren, Raphaël Méheust, Joanne M. Santini, Alex Thomas, Jacob West-Roberts, Jillian F. Banfield, Lisa Alvarez-Cohen

Source: Computational and Structural Biotechnology Journal, Vol 20, Iss , Pp 559-572 (2022)

Subject Terms: Arsenic, Microbial genomics, Machine Learning, Human microbiome, Biotechnology, TP248.13-248.65

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S200103702200006X; https://doaj.org/toc/2001-0370

Access URL: https://doaj.org/article/ccd3cb8fe0a54d39818d950e2c9be2d3

Increased replication of dissimilatory nitrate-reducing bacteria leads to decreased anammox bioreactor performance

Authors: Ray Keren, Jennifer E. Lawrence, Weiqin Zhuang, David Jenkins, Jillian F. Banfield, Lisa Alvarez-Cohen, Lijie Zhou, Ke Yu

Source: Microbiome, Vol 8, Iss 1, Pp 1-21 (2020)

Subject Terms: Anammox, Metagenomics, Metabolism, Dissimilatory nitrate reduction (DNRA), Nitrogen cycle, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/5fa8f3b5e0c4415aa047792d2af56d5f

Microbial functional diversity: From concepts to applications

Authors: Arthur Escalas, Lauren Hale, James W. Voordeckers, Yunfeng Yang, Mary K. Firestone, Lisa Alvarez‐Cohen, Jizhong Zhou

Source: Ecology and Evolution, Vol 9, Iss 20, Pp 12000-12016 (2019)

Subject Terms: functional diversity, functional traits, microbial communities, theoretical frameworks of diversity, trait‐based ecology, Ecology, QH540-549.5

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7758

Access URL: https://doaj.org/article/778c19edf3ea496e873aa420d402d32b

Acetylene-Fueled Trichloroethene Reductive Dechlorination in a Groundwater Enrichment Culture

Authors: Sara Gushgari-Doyle, Ronald S. Oremland, Ray Keren, Shaun M. Baesman, Denise M. Akob, Jillian F. Banfield, Lisa Alvarez-Cohen

Source: mBio, Vol 12, Iss 1 (2021)

Subject Terms: Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2161-2129; https://doaj.org/toc/2150-7511

Access URL: https://doaj.org/article/ccebff6e0c014e778f2f51f7219aaf6c

An integrated meta-omics approach reveals substrates involved in synergistic interactions in a bisphenol A (BPA)-degrading microbial community

Authors: Ke Yu, Shan Yi, Bing Li, Feng Guo, Xingxing Peng, Zhiping Wang, Yang Wu, Lisa Alvarez-Cohen, Tong Zhang

Source: Microbiome, Vol 7, Iss 1, Pp 1-13 (2019)

Subject Terms: Integrated meta-omics, Bisphenol A, Bacterial interactions, Biodegradation, Microbial ecology, QR100-130

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s40168-019-0634-5; https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/da399d75790c4cfaafbae95541c016d5

Metabolomic Analysis Reveals Contributions of Citric and Citramalic Acids to Rare Earth Bioleaching by a Paecilomyces Fungus

Authors: Vanessa L. Brisson, Wei-Qin Zhuang, Lisa Alvarez-Cohen

Source: Frontiers in Microbiology, Vol 10 (2020)

Subject Terms: bioleaching, rare earth elements, thorium, metabolomics, Paecilomyces, phosphate solubilizing, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fmicb.2019.03008/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/b90f9867b5524eabb3a971d9bb6c8209

Membrane complexes of Syntrophomonas wolfei involved in syntrophic butyrate degradation and hydrogen formation

Authors: Bryan Regis Crable, Jessica Rhea Sieber, Xinwei Mao, Lisa Alvarez-Cohen, Robert P. Gunsalus, Rachel R. Ogorzalek Loo, Hong Hanh Nguyen, Michael Joseph McInerney

Source: Frontiers in Microbiology, Vol 7 (2016)

Subject Terms: Fatty Acids, methanogenesis, syntrophy, biohydrogen, hydrogenases, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.01795/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/957edc52665e426eb2334f67c382e8a4

High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats

Authors: Jizhong Zhou, Zhili He, Yunfeng Yang, Ye Deng, Susannah G. Tringe, Lisa Alvarez-Cohen

Source: mBio, Vol 6, Iss 1 (2015)

Subject Terms: Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2150-7511

Access URL: https://doaj.org/article/246d3d2ba7f14caf945a493537cf8d25

Stable Carbon Isotope Fractionation of Chloroethenes by Dehalorespiring Isolates.

Authors: Lee, Patrick K. H.¹, Conrad, Mark E.², Lisa Alvarez-Cohen^1,2 alvarez@ce.berkeley.edu

Source: Environmental Science & Technology. 6/15/2007, Vol. 41 Issue 12, p4277-4285. 9p. 1 Chart, 5 Graphs.

Subject Terms: *Vinyl chloride, *Physiological control systems, Stable isotopes, Carbon isotopes, Corrinoids, Vitamin B12, Chemical structure, Halobacterium, Biological systems

MTBE and Other Oxygenates: Environmental Sources, Analysis, Occurrence, and Treatment.

Authors: Rula A. Deeb, Kung-Hui Chu, Tom Shih, Steven Linder, Irwin (Mel) Suffet, Michael C. Kavanaugh, Lisa Alvarez-Cohen

Source: Environmental Engineering Science; Sep2003, Vol. 20 Issue 5, p433, 15p

Subject Terms: FUEL, OXYGENATORS, AIR quality

N-Nitrosodimethylamine (NDMA) as a Drinking Water Contaminant: A Review.

Authors: William A. Mitch, Jonathan O. Sharp, R. Rhodes Trussell, Richard L. Valentine, Lisa Alvarez-Cohen, David L. Sedlak

Source: Environmental Engineering Science; Sep2003, Vol. 20 Issue 5, p389, 16p

Subject Terms: DIMETHYLNITROSAMINE, CARCINOGENS, GENETIC toxicology, FOOD

Emerging Contaminants in Water.

Authors: Lisa Alvarez-Cohen, David L. Sedlak

Source: Environmental Engineering Science. Sep2003, Vol. 20 Issue 5, p387. 2p.