Decorating chromatin for enhanced genome editing using CRISPR-Cas9

Authors: Chen, Evelyn, Lin-Shiao, Enrique, Trinidad, Marena, Doost, Mohammad Saffari, Colognori, David, Doudna, Jennifer A.

Source: Proceedings of the National Academy of Sciences of the United States of America, 2022 Dec 01. 119(49), 1-9.

Access URL: https://www.jstor.org/stable/27209466

p53 mediates target gene association with nuclear speckles for amplified RNA expression

Authors: Alexander, Katherine A., Coté, Allison, Nguyen, Son C., Zhang, Liguo, Gholamalamdari, Omid, Agudelo-Garcia, Paula, Lin-Shiao, Enrique, Tanim, K.M.A., Lim, Joan, Biddle, Nicolas, Dunagin, Margaret C., Good, Charly R., Mendoza, Mariel R., Little, Shawn C., Belmont, Andrew, Joyce, Eric F., Raj, Arjun, Berger, Shelley L.

Source: In Molecular Cell 15 April 2021 81(8):1666-1681

Gcn5-Mediated Histone Acetylation Governs Nucleosome Dynamics in Spermiogenesis

Authors: Luense, Lacey J., Donahue, Greg, Lin-Shiao, Enrique, Rangel, Richard, Weller, Angela H., Bartolomei, Marisa S., Berger, Shelley L.

Source: In Developmental Cell 16 December 2019 51(6):745-758

Def1 interacts with TFIIH and modulates RNA polymerase II transcription

Authors: Damodaren, Nivedita, Van Eeuwen, Trevor, Zamel, Joanna, Lin-Shiao, Enrique, Kalisman, Nir, Murakami, Kenji

Source: Proceedings of the National Academy of Sciences of the United States of America, 2017 Dec 01. 114(50), 13230-13235.

Access URL: https://www.jstor.org/stable/26485797

KMT2D regulates p63 target enhancers to coordinate epithelial homeostasis

Authors: Lin-Shiao, Enrique, Lan, Yemin, Coradin, Mariel, Anderson, Amy, Donahue, Greg, Simpson, Cory L., Sen, Payel, Saffie, Rizwan, Busino, Luca, Garcia, Benjamin A.

Source: Genes & development. 32(2):181-193

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN615181869&indx=1&recIds=ETOCRN615181869

Disruption of TET2 promotes the therapeutic efficacy of CD19-targeted T cells

Authors: Fraietta, Joseph, Nobles, Christopher, Sammons, Morgan, Lundh, Stefan, Carty, Shannon, Reich, Tyler, Cogdill, Alexandria, Morrissette, Jennifer, DeNizio, Jamie, Reddy, Shantan, Hwang, Young, Gohil, Mercy, Kulikovskaya, Irina, Nazimuddin, Farzana, Gupta, Minnal, Chen, Fang, Everett, John, Alexander, Katherine, Lin-Shiao, Enrique, Gee, Marvin, Liu, Xiaojun, Young, Regina, Ambrose, David, Wang, Yan, Xu, Jun, Jordan, Martha, Marcucci, Katherine, Levine, Bruce, Garcia, K., Zhao, Yangbing, Kalos, Michael, Porter, David, Kohli, Rahul, Lacey, Simon, Berger, Shelley, Bushman, Frederic, June, Carl, Melenhorst, J.

Source: Nature. 558(7709):307-312

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100153455431.0x000001&indx=1&recIds=ETOCvdc_100153455431.0x000001

A bump-and-hole approach to engineer controlled selectivity of BET bromodomain chemical probes

Authors: Baud, Matthias G. J., Lin-Shiao, Enrique, Cardote, Teresa, Tallant, Cynthia, Pschibul, Annica, Chan, Kwok-Ho, Zengerle, Michael, Garcia, Jordi R., Kwan, Terence T.-L., Ferguson, Fleur M., Ciulli, Alessio

Source: Science, 2014 Oct . 346(6209), 638-641.

Access URL: https://www.jstor.org/stable/24917539

CRISPR–Cas9-mediated nuclear transport and genomic integration of nanostructured genes in human primary cells.

Authors: Lin-Shiao, Enrique, Pfeifer, Wolfgang G, Shy, Brian R, Saffari Doost, Mohammad, Chen, Evelyn, Vykunta, Vivasvan S, Hamilton, Jennifer R, Stahl, Elizabeth C, Lopez, Diana M, Sandoval Espinoza, Cindy R, Deyanov, Alexander E, Lew, Rachel J, Poirer, Michael G, Marson, Alexander, Castro, Carlos E, Doudna, Jennifer A

Source: Nucleic Acids Research; 2/22/2022, Vol. 50 Issue 3, p1256-1268, 13p

LuNER: Multiplexed SARS-CoV-2 detection in clinical swab and wastewater samples.

Authors: Stahl, Elizabeth C., Gopez, Allan R., Tsuchida, Connor A., Fan, Vinson B., Moehle, Erica A., Witkowsky, Lea B., Hamilton, Jennifer R., Lin-Shiao, Enrique, McElroy, Matthew, McDevitt, Shana L., Ciling, Alison, Tsui, C. Kimberly, Pestal, Kathleen, Gildea, Holly K., Keller, Amanda, Sylvain, Iman A., Williams, Clara, Hirsh, Ariana, Ehrenberg, Alexander J., Kantor, Rose

Source: PLoS ONE; 11/10/2021, Vol. 17 Issue 11, p1-16, 16p

Subject Terms: SARS-CoV-2, SEWAGE, BIOLOGICAL systems

Robotic RNA extraction for SARS-CoV-2 surveillance using saliva samples.

Authors: Hamilton, Jennifer R., Stahl, Elizabeth C., Tsuchida, Connor A., Lin-Shiao, Enrique, Tsui, C. Kimberly, Pestal, Kathleen, Gildea, Holly K., Witkowsky, Lea B., Moehle, Erica A., McDevitt, Shana L., McElroy, Matthew, Keller, Amanda, Sylvain, Iman, Hirsh, Ariana, Ciling, Alison, Ehrenberg, Alexander J., Ringeisen, Bradley R., Huberty, Garth, Urnov, Fyodor D., Giannikopoulos, Petros

Source: PLoS ONE; 8/5/2021, Vol. 16 Issue 8, p1-18, 18p

Subject Terms: SALIVA, NUCLEIC acid isolation methods, SARS-CoV-2, RNA, SALIVA analysis, COVID-19

Company/Entity: UNIVERSITY of California, Berkeley

Launching a saliva-based SARS-CoV-2 surveillance testing program on a university campus.

Authors: Ehrenberg, Alexander J., Moehle, Erica A., Brook, Cara E., Doudna Cate, Andrew H., Witkowsky, Lea B., Sachdeva, Rohan, Hirsh, Ariana, Barry, Kerrie, Hamilton, Jennifer R., Lin-Shiao, Enrique, McDevitt, Shana, Valentin-Alvarado, Luis, Letourneau, Kaitlyn N., Hunter, Lauren, Keller, Amanda, Pestal, Kathleen, Frankino, Phillip A., Murley, Andrew, Nandakumar, Divya, Stahl, Elizabeth C.

Source: PLoS ONE; 5/26/2021, Vol. 16 Issue 5, p1-20, 20p

Subject Terms: SARS-CoV-2, COVID-19 pandemic, SALIVA analysis, UNIVERSITIES & colleges, PANDEMICS, COMMUNITIES

Company/Entity: UNIVERSITY of California, Berkeley

DNA capture by a CRISPR-Cas9–guided adenine base editor.

Authors: Lapinaite, Audrone¹, Knott, Gavin J.², Palumbo, Cody M.³, Lin-Shiao, Enrique, Richter, Michelle F.⁴, Zhao, Kevin T., Beal, Peter A., Liu, David R., Doudna, Jennifer A.⁵, doudna@berkeley.edu

Source: Science; 7/31/2020, Vol. 369 Issue 6503, p566-571, 6p, 2 Diagrams, 2 Graphs

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Disruption of TET2promotes the therapeutic efficacy of CD19-targeted T cells

Authors: Fraietta, Joseph, Nobles, Christopher, Sammons, Morgan, Lundh, Stefan, Carty, Shannon, Reich, Tyler, Cogdill, Alexandria, Morrissette, Jennifer, DeNizio, Jamie, Reddy, Shantan, Hwang, Young, Gohil, Mercy, Kulikovskaya, Irina, Nazimuddin, Farzana, Gupta, Minnal, Chen, Fang, Everett, John, Alexander, Katherine, Lin-Shiao, Enrique, Gee, Marvin, Liu, Xiaojun, Young, Regina, Ambrose, David, Wang, Yan, Xu, Jun, Jordan, Martha, Marcucci, Katherine, Levine, Bruce, Garcia, K., Zhao, Yangbing, Kalos, Michael, Porter, David, Kohli, Rahul, Lacey, Simon, Berger, Shelley, Bushman, Frederic, June, Carl, Melenhorst, J.

Source: Nature; June 2018, Vol. 558 Issue: 7709 p307-312, 6p

Comprehensive analysis of histone post-translational modifications in mouse and human male germ cells.

Authors: Luense, Lacey J., Xiaoshi Wang, Schon, Samantha B., Weller, Angela H., Lin Shiao, Enrique, Bryant, Jessica M., Bartolomei, Marisa S., Coutifaris, Christos, Garcia, Benjamin A., Berger, Shelley L.

Source: Epigenetics & Chromatin; 6/21/2016, Vol. 9, p1-15, 15p

Subject Terms: HISTONES, POST-translational modification, GERM cells, SPERMATOGENESIS, EMBRYOLOGY

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p63 establishes epithelial enhancers at critical craniofacial development genes.

Authors: Yemin Lan¹, Alexander, Katherine A.¹, Zhen Zhang¹, Sammons, Morgan¹, Berger, Shelley L.¹, Lin-Shiao, Enrique^1,2, Welzenbach, Julia³, Mangold, Elisabeth³, Ludwig, Kerstin U.³, Knapp, Michael⁴

Source: Science Advances. May2019, Vol. 5 Issue 5, p1-15. 15p.

Subject Terms: *EPIDERMAL diseases, *TRANSCRIPTION factors