The pediatric virome in health and disease

Authors: Liang, Guanxiang, Gao, Hongyan, Bushman, Frederic D.

Source: Cell host & microbe. 30(5):639-649

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100162492661.0x000001&indx=1&recIds=ETOCvdc_100162492661.0x000001

The gut virome in inflammatory bowel diseases

Authors: Liang, Guanxiang, Cobián-Güemes, Ana Georgina, Albenberg, Lindsey, Bushman, Frederic

Source: In Current Opinion in Virology December 2021 51:190-198

Assembly of the virome in newborn human infants

Authors: Bushman, Frederic, Liang, Guanxiang

Source: In Current Opinion in Virology June 2021 48:17-22

YY1 control of mitochondrial‐related genes does not account for regulation of immunoglobulin class switch recombination in mice

Authors: Nandi, Satabdi, Liang, Guanxiang, Sindhava, Vishal, Angireddy, Rajesh, Basu, Arindam, Banerjee, Sarmistha, Hodawadekar, Suchita, Zhang, Yue, Avadhani, Narayan G., Sen, Ranjan, Atchison, Michael L.

Source: European journal of immunology. 50(6):822-838

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100107486089.0x000001&indx=1&recIds=ETOCvdc_100107486089.0x000001

The plasma viral communities associate with clinical profiles in a large-scale haematological patients cohort.

Authors: Ma, Shuai, Yin, Yuyao, Guo, Yifan, Yao, Chaoqun, Xu, Siqi, Luo, Qingqing, Yin, Guankun, Wang, Shuyi, Wang, Qi, Chen, Hongbin, Wang, Ruobing, Jin, Longyang, Liang, Guanxiang, Wang, Hui

Source: Microbiome; 7/23/2024, Vol. 12 Issue 1, p1-16, 16p

Subject Terms: EPSTEIN-Barr virus, TORQUE teno virus, MIXED infections, VIRUS diseases, PARVOVIRUS B19, DNA viruses

Regulation of rumen development in neonatal ruminants through microbial metagenomes and host transcriptomes

Authors: Malmuthuge, Nilusha, Liang, Guanxiang, Guan, Le

Source: Genome biology. 20(1):1-16

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100194229420.0x000001&indx=1&recIds=ETOCvdc_100194229420.0x000001

The MOV10 RNA helicase is a dosage-dependent host restriction factor for LINE1 retrotransposition in mice.

Authors: Guan, Yongjuan^1,2, Gao, Hongyan³, Leu, N. Adrian¹, Vourekas, Anastassios^4,5, Alexiou, Panagiotis⁴, Maragkakis, Manolis⁴, Kang, Zhenlong^1,6, Mourelatos, Zissimos⁴, Liang, Guanxiang³, Wang, P. Jeremy¹, pwang@vet.upenn.edu

Source: PLoS Genetics; 5/1/2023, Vol. 19 Issue 5, p1-22, 22p

Region-specific establishment of bacterial communities in the small intestine of neonatal calves from birth.

Authors: Malmuthuge, Nilusha, Chen, Yanhong, Liang, Guanxiang, Widenmann, Anna, Guan, Le Luo

Source: Animal Nutriomics; 2024, Vol. 1, p1-10, 10p

Subject Terms: COLONIZATION, PSEUDOMONADACEAE, PROPIONIBACTERIACEAE, BIFIDOBACTERIUM, RNA

Heat-treated colostrum feeding promotes beneficial bacteria colonization in the small intestine of neonatal calves

Authors: Malmuthuge, Nilusha, Chen, Yanhong, Liang, Guanxiang, Goonewardene, Laksiri A., Guan, Le Luo

Source: In Journal of Dairy Science November 2015 98(11):8044-8053

Model systems to analyze the role of miRNAs and commensal microflora in bovine mucosal immune system development

Authors: Liang, Guanxiang, Malmuthuge, Nilusha, Guan, Le Luo, Griebel, Philip

Source: In Molecular Immunology July 2015 66(1):57-67

Viral communities of the human gut: metagenomic analysis of composition and dynamics

Authors: Aggarwala, Varun, Liang, Guanxiang, Bushman, Frederic

Source: Mobile DNA. 8(1):1-10

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100144531872.0x000001&indx=1&recIds=ETOCvdc_100144531872.0x000001

Virome in immunodeficiency: what we know currently.

Authors: Wang, Hu, Xu, Siqi, Li, Shuang, Su, Bin, Sherrill-Mix, Scott, Liang, Guanxiang, Gao, Ting, Yin, Yanjie

Source: Chinese Medical Journal; 11/20/2023, Vol. 136 Issue 22, p2647-2657, 11p

Cytomegalovirus Latent Infection is Associated with an Increased Risk of COVID-19-Related Hospitalization.

Authors: Alanio, Cécile, Verma, Anurag, Mathew, Divij, Gouma, Sigrid, Liang, Guanxiang, Dunn, Thomas, Oldridge, Derek A, Weaver, JoEllen, Kuri-Cervantes, Leticia, Pampena, M Betina, Betts, Michael R, Collman, Ronald G, Bushman, Frederic D, Meyer, Nuala J, Hensley, Scott E, Rader, Daniel, Wherry, E John, Unit, The UPenn COVID Processing, UPenn COVID Processing Unit

Source: Journal of Infectious Diseases; Aug2022, Vol. 226 Issue 3, p463-473, 11p

Comparative Transcriptomic Analysis of Rectal Tissue from Beef Steers Revealed Reduced Host Immunity in Escherichia coli O157:H7 Super-Shedders.

Authors: Wang, Ou¹, Liang, Guanxiang¹, McAllister, Tim A.², Plastow, Graham¹, Stanford, Kim³, Selinger, Brent⁴, Guan, Le Luo¹ lguan@ualberta.ca

Source: PLoS ONE. 3/9/2016, Vol. 11 Issue 3, p1-19. 19p.

Subject Terms: *IMMUNITY, *ESCHERICHIA coli, *TISSUE engineering, *RNA sequencing, *MICRORNA, *CYTOKINES

MORC2B is essential for meiotic progression and fertility.

Authors: Shi, Baolu^1,2, bbhxy@njmu.edu.cn, Xue, Jiangyang^1,2,3, Zhou, Jian⁴, Kasowitz, Seth D.², Zhang, Yuanwei⁵, Liang, Guanxiang⁶, Guan, Yongjuan², Shi, Qinghua⁵, Liu, Mingxi¹, Sha, Jiahao¹, Huang, Xiaoyan¹, Wang, P. Jeremy^1,2, pwang@vet.upenn.edu

Source: PLoS Genetics; 1/12/2018, Vol. 14 Issue 1, p1-21, 21p

Loss of Xist RNA from the inactive X during B cell development is restored in a dynamic YY1-dependent two-step process in activated B cells.

Authors: Syrett, Camille M.¹, Sindhava, Vishal^1,2, Hodawadekar, Suchita¹, Myles, Arpita², Liang, Guanxiang², Zhang, Yue¹, Nandi, Satabdi¹, Cancro, Michael², Atchison, Michael¹, Anguera, Montserrat C.¹, Anguera@vet.upenn.edu

Source: PLoS Genetics; 10/09/2017, Vol. 13 Issue 10, p1-28, 28p

Potential Regulatory Role of MicroRNAs in the Development of Bovine Gastrointestinal Tract during Early Life.

Authors: Liang, Guanxiang¹, Malmuthuge, Nilusha¹, McFadden, Thomas B.², Bao, Hua¹, Griebel, Philip J.^3,4, Stothard, Paul¹, Guan, Le Luo¹ lguan@ualberta.ca

Source: PLoS ONE. Mar2014, Vol. 9 Issue 3, p1-13. 13p.

Subject Terms: *MICRORNA, *CELLULAR immunity, *GASTROINTESTINAL system physiology, *SMALL intestine, *CELL proliferation, *NUCLEOTIDE sequence, CATTLE development

Dynamics of the Stool Virome in Very Early-Onset Inflammatory Bowel Disease.

Authors: Liang, Guanxiang, Conrad, Maire A, Kelsen, Judith R, Kessler, Lyanna R, Breton, Jessica, Albenberg, Lindsey G, Marakos, Sarah, Galgano, Alissa, Devas, Nina, Erlichman, Jessi, Zhang, Huanjia, Mattei, Lisa, Bittinger, Kyle, Baldassano, Robert N, Bushman, Frederic D

Source: Journal of Crohn's & Colitis; Nov2020, Vol. 14 Issue 11, p1600-1610, 11p

The stepwise assembly of the neonatal virome is modulated by breastfeeding.

Authors: Liang, Guanxiang, Zhao, Chunyu, Zhang, Huanjia, Mattei, Lisa, Sherrill-Mix, Scott, Bittinger, Kyle, Kessler, Lyanna R., Wu, Gary D., Baldassano, Robert N., DeRusso, Patricia, Ford, Eileen, Elovitz, Michal A., Kelly, Matthew S., Patel, Mohamed Z., Mazhani, Tiny, Gerber, Jeffrey S., Kelly, Andrea, Zemel, Babette S., Bushman, Frederic D.

Source: Nature; 5/28/2020, Vol. 581 Issue 7809, p470-474, 5p, 5 Diagrams, 1 Chart, 7 Graphs

The human virome: assembly, composition and host interactions

Authors: Liang, Guanxiang, Bushman, Frederic D.

Source: Nature Reviews Microbiology; August 2021, Vol. 19 Issue: 8 p514-527, 14p