The effect of γ matrix channel width on the compositional evolution in a multi-component nickel-based superalloy

Authors: Saksena, Aparna, Kubacka, Dorota, Gault, Baptiste, Spiecker, Erdmann, Kontis, Paraskevas

Source: In Scripta Materialia October 2022 219

Early stages of high-temperature oxidation of Ni- and Co-base model superalloys: A comparative study using rapid thermal annealing and advanced electron microscopy

Authors: Kubacka, Dorota, Weiser, Martin, Spiecker, Erdmann ^*

Source: In Corrosion Science October 2021 191

Intrinsic nano-diffusion-couple for studying high temperature diffusion in multi-component superalloys

Authors: Eggeler, Yolita M., Kubacka, Dorota, Pichler, Peter, Wu, Mingjian, Spiecker, Erdmann

Source: In Scripta Materialia February 2021 192:120-124

Structural Insights into the Interaction of Clinically Relevant Phosphorothioate mRNA Cap Analogs with Translation Initiation Factor 4E Reveal Stabilization via Electrostatic Thio-Effect

Authors: Warminski, Marcin, Kowalska, Joanna, Nowak, Elzbieta, Kubacka, Dorota, Tibble, Ryan, Kasprzyk, Renata, Sikorski, Pawel J., Gross, John D., Nowotny, Marcin, Jemielity, Jacek

Source: ACS chemical biology. 16(2):334-343

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN625859254&indx=1&recIds=ETOCRN625859254

Biological behavior of titanium processed by severe plastic deformation

Authors: Kubacka, Dorota, Yamamoto, Akiko, Wieciński, Piotr, Garbacz, Halina

Source: In Applied Surface Science 1 April 2019 472:54-63

Trimethylguanosine cap-fluorescent molecular rotor (TMG–FMR) conjugates are potent, specific snurportin1 ligands enabling visualization in living cells.

Authors: Surynt, Piotr, Wojtczak, Blazej A., Chrominski, Mikolaj, Panecka-Hofman, Joanna, Kwapiszewska, Karina, Kalwarczyk, Tomasz, Kubacka, Dorota, Spiewla, Tomasz, Kasprzyk, Renata, Holyst, Robert, Kowalska, Joanna, Jemielity, Jacek

Source: Organic & Biomolecular Chemistry; 9/7/2024, Vol. 22 Issue 33, p6763-6790, 28p

7-Methylguanosine monophosphate analogues with 5′-(1,2,3-triazoyl) moiety: Synthesis and evaluation as the inhibitors of cNIIIB nucleotidase

Authors: Kozarski, Mateusz, Kubacka, Dorota, Wojtczak, Blazej A., Kasprzyk, Renata, Baranowski, Marek R., Kowalska, Joanna

Source: In Bioorganic & Medicinal Chemistry 1 January 2018 26(1):191-199

Fluorescent Turn‐On Probes for the Development of Binding and Hydrolytic Activity Assays for mRNA Cap‐Recognizing Proteins

Authors: Kasprzyk, Renata, Starek, Beata J., Ciechanowicz, Sylwia, Kubacka, Dorota, Kowalska, Joanna, Jemielity, Jacek

Source: Chemistry. 25(27):6728-6740

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100084012639.0x000001&indx=1&recIds=ETOCvdc_100084012639.0x000001

Influence of nanostructure on titanium corrosion resistance in fluoridated medium

Authors: Sotniczuk, Agata, Kuczyńska, Donata, Kubacka, Dorota, Królikowski, Andrzej, Garbacz, Halina

Source: Materials science and technology. 35(3):288-296

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100108293557.0x000001&indx=1&recIds=ETOCvdc_100108293557.0x000001

Substrate-Based Design of Cytosolic Nucleotidase IIIB Inhibitors and Structural Insights into Inhibition Mechanism.

Authors: Kubacka, Dorota¹ (AUTHOR) dkubacka1@gmail.com, Kozarski, Mateusz^1,2 (AUTHOR) mateusz.kozarski@fuw.edu.pl, Baranowski, Marek R.¹ (AUTHOR) marek.baranowski@fuw.edu.pl, Wojcik, Radoslaw² (AUTHOR), Panecka-Hofman, Joanna¹ (AUTHOR) joanna.panecka@uw.edu.pl, Strzelecka, Dominika¹ (AUTHOR) dominika.strzelecka@student.uw.edu.pl, Basquin, Jerome³ (AUTHOR) basquin@biochem.mpg.de, Jemielity, Jacek² (AUTHOR) j.jemielity@cent.uw.edu.pl, Kowalska, Joanna¹ (AUTHOR) j.jemielity@cent.uw.edu.pl

Source: Pharmaceuticals (14248247). May2022, Vol. 15 Issue 5, p554-554. 27p.

Subject Terms: *X-ray crystallography, *NUCLEOTIDASES, *STRUCTURE-activity relationships, *MOLECULAR docking, *METABOLITES

5′-Phosphorothiolate Dinucleotide Cap Analogues: Reagents for Messenger RNA Modification and Potent Small-Molecular Inhibitors of Decapping Enzymes

Authors: Wojtczak, Blazej A., Sikorski, Pawel J., Fac-Dabrowska, Kaja, Nowicka, Anna, Warminski, Marcin, Kubacka, Dorota, Nowak, Elzbieta, Nowotny, Marcin, Kowalska, Joanna, Jemielity, Jacek

Source: Journal of the American Chemical Society. 140(18):5987-5999

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN615958602&indx=1&recIds=ETOCRN615958602

Distinct Features of Cap Binding by eIF4E1b Proteins

Authors: Kubacka, Dorota, Miguel, Ricardo Núñez, Minshall, Nicola, Darzynkiewicz, Edward, Standart, Nancy, Zuberek, Joanna

Source: In Journal of Molecular Biology 30 January 2015 427(2):387-405

Evaluation of carboxyfluorescein-labeled 7-methylguanine nucleotides as probes for studying cap-binding proteins by fluorescence anisotropy.

Authors: Wojtczak, Anna, Kasprzyk, Renata, Warmiński, Marcin, Ubych, Krystian, Kubacka, Dorota, Sikorski, Pawel J., Jemielity, Jacek, Kowalska, Joanna

Source: Scientific Reports; 4/8/2021, Vol. 11 Issue 1, p1-15, 15p

Subject Terms: METHYLGUANINE, NUCLEOTIDES, CARRIER proteins, FLUORESCENCE anisotropy, MESSENGER RNA

Cover Feature: Fluorescent Turn‐On Probes for the Development of Binding and Hydrolytic Activity Assays for mRNA Cap‐Recognizing Proteins (Chem. Eur. J. 27/2019)

Authors: Kasprzyk, Renata, Starek, Beata J., Ciechanowicz, Sylwia, Kubacka, Dorota, Kowalska, Joanna, Jemielity, Jacek

Source: Chemistry. 25(27):6646-6646

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100086938462.0x000001&indx=1&recIds=ETOCvdc_100086938462.0x000001

The identity and methylation status of the first transcribed nucleotide in eukaryotic mRNA 5′ cap modulates protein expression in living cells.

Authors: Sikorski, Pawel J, Warminski, Marcin, Kubacka, Dorota, Ratajczak, Tomasz, Nowis, Dominika, Kowalska, Joanna, Jemielity, Jacek

Source: Nucleic Acids Research; 2/28/2020, Vol. 48 Issue 4, p1607-1626, 20p

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Novel N7-Arylmethyl Substituted Dinucleotide mRNA 5′ cap Analogs: Synthesis and Evaluation as Modulators of Translation †.

Authors: Wojcik, Radoslaw, Baranowski, Marek R., Markiewicz, Lukasz, Kubacka, Dorota, Bednarczyk, Marcelina, Baran, Natalia, Wojtczak, Anna, Sikorski, Pawel J., Zuberek, Joanna, Kowalska, Joanna, Jemielity, Jacek

Source: Pharmaceutics; Nov2021, Vol. 13 Issue 11, p1941, 1p

Subject Terms: METHYL groups, STRUCTURE-activity relationships, MESSENGER RNA, BENZYL group, GENETIC translation, GUANOSINE, CRYSTAL structure, IMIDAZOLES