Hyperglycemia and circadian disruption lead to retinal dysfunction in a stabilized colony of the fat sand rat Psammomys obesus

Authors: Estay-Ahumada, Catherine E., Verra, Daniela M., Roux, Michel, Sassone, Fabiana, Felder-Schmittbuhl, Marie-Paule, Klopp, Christophe, Ciocca, Dominique, Moal, Myriam Ly-Le, Hicks, David

Source: In BBA - Molecular Basis of Disease April 2024 1870(4)

Insights into the molecular mechanisms of pesticide tolerance in the Aporrectodea caliginosa earthworm

Authors: Barranger, Audrey, Klopp, Christophe, Le Bot, Barbara, Saramito, Gaëlle, Dupont, Lise, Llopis, Stéphanie, Wiegand, Claudia, Binet, Françoise

Source: In Environmental Pollution 15 February 2023 319

Venomics survey of six myrmicine ants provides insights into the molecular and structural diversity of their peptide toxins

Authors: Barassé, Valentine, Téné, Nathan, Klopp, Christophe, Paquet, Françoise, Tysklind, Niklas, Troispoux, Valérie, Lalägue, Hadrien, Orivel, Jérôme, Lefranc, Benjamin, Leprince, Jérôme, Kenne, Martin, Tindo, Maurice, Treilhou, Michel, Touchard, Axel, Bonnafé, Elsa

Source: In Insect Biochemistry and Molecular Biology December 2022 151

A 180 Myr-old female-specific genome region in sturgeon reveals the oldest known vertebrate sex determining system with undifferentiated sex chromosomes

Authors: Kuhl, Heiner, Guiguen, Yann, Höhne, Christin, Kreuz, Eva, Du, Kang, Klopp, Christophe, Lopez-Roques, Céline, Yebra-Pimentel, Elena Santidrian, Ciorpac, Mitica, Gessner, Jörn, Holostenco, Daniela, Kleiner, Wibke, Kohlmann, Klaus, Lamatsch, Dunja K., Prokopov, Dmitry, Bestin, Anastasia, Bonpunt, Emmanuel, Debeuf, Bastien, Haffray, Pierrick, Morvezen, Romain, Patrice, Pierre, Suciu, Radu, Dirks, Ron, Wuertz, Sven, Kloas, Werner, Schartl, Manfred, Stöck, Matthias

Source: Philosophical Transactions: Biological Sciences, 2021 Aug . 376(1832), 1-10.

Access URL: https://www.jstor.org/stable/27147110

Fourth Report on Chicken Genes and Chromosomes 2022

Authors: Smith, Jacqueline, Alfieri, James M., Anthony, Nick, Arensburger, Peter, Athrey, Giridhar N., Balacco, Jennifer, Balic, Adam, Bardou, Philippe, Barela, Paul, Bigot, Yves, Blackmon, Heath, Borodin, Pavel M., Carroll, Rachel, Casono, Meya C., Charles, Mathieu, Cheng, Hans, Chiodi, Maddie, Cigan, Lacey, Coghill, Lyndon M., Crooijmans, Richard, Das, Neelabja, Davey, Sean, Davidian, Asya, Degalez, Fabien, Dekkers, Jack M., Derks, Martijn, Diack, Abigail B., Djikeng, Appolinaire, Drechsler, Yvonne, Dyomin, Alexander, Fedrigo, Olivier, Fiddaman, Steven R., Formenti, Giulio, Frantz, Laurent A.F., Fulton, Janet E., Gaginskaya, Elena, Galkina, Svetlana, Gallardo, Rodrigo A., Geibel, Johannes, Gheyas, Almas A., Godinez, Cyrill John P., Goodell, Ashton, Graves, Jennifer A.M., Griffin, Darren K., Haase, Bettina, Han, Jian-Lin, Hanotte, Olivier, Henderson, Lindsay J., Hou, Zhuo-Cheng, Howe, Kerstin, Huynh, Lan, Ilatsia, Evans, Jarvis, Erich D., Johnson, Sarah M., Kaufman, Jim, Kelly, Terra, Kemp, Steve, Kern, Colin, Keroack, Jacob H., Klopp, Christophe, Lagarrigue, Sandrine, Lamont, Susan J., Lange, Margaret, Lanke, Anika, Larkin, Denis M., Larson, Greger, Layos, John King N., Lebrasseur, Ophélie, Malinovskaya, Lyubov P., Martin, Rebecca J., Martin Cerezo, Maria Luisa, Mason, Andrew S., McCarthy, Fiona M., McGrew, Michael J., Mountcastle, Jacquelyn, Muhonja, Christine Kamidi, Muir, William, Muret, Kévin, Murphy, Terence D., Ng'ang'a, Ismael, Nishibori, Masahide, O'Connor, Rebecca E., Ogugo, Moses, Okimoto, Ron, Ouko, Ochieng, Patel, Hardip R., Perini, Francesco, Pigozzi, María Ines, Potter, Krista C., Price, Peter D., Reimer, Christian, Rice, Edward S., Rocos, Nicolas, Rogers, Thea F., Saelao, Perot, Schauer, Jens, Schnabel, Robert D., Schneider, Valerie A., Simianer, Henner, Smith, Adrian, Stevens, Mark P., Stiers, Kyle, Tiambo, Christian Keambou, Tixier-Boichard, Michele, Torgasheva, Anna A., Tracey, Alan, Tregaskes, Clive A., Vervelde, Lonneke, Wang, Ying, Warren, Wesley C., Waters, Paul D., Webb, David, Weigend, Steffen, Wolc, Anna, Wright, Alison E., Wright, Dominic, Wu, Zhou, Yamagata, Masahito, Yang, Chentao, Yin, Zhong-Tao, Young, Michelle C., Zhang, Guojie, Zhao, Bingru, Zhou, Huaijun

Source: Cytogenetic and genome research. 162(8/9):405-528

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100188182309.0x000001&indx=1&recIds=ETOCvdc_100188182309.0x000001

An ancient truncated duplication of the anti‐Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family

Authors: Wen, Ming, Pan, Qiaowei, Jouanno, Elodie, Montfort, Jerome, Zahm, Margot, Cabau, Cédric, Klopp, Christophe, Iampietro, Carole, Roques, Céline, Bouchez, Olivier, Castinel, Adrien, Donnadieu, Cécile, Parrinello, Hugues, Poncet, Charles, Belmonte, Elodie, Gautier, Véronique, Avarre, Jean‐Christophe, Dugue, Remi, Gustiano, Rudhy, Hà, Trần Thị Thúy, Campet, Marc, Sriphairoj, Kednapat, Ribolli, Josiane, Almeida, Fernanda L., Desvignes, Thomas, Postlethwait, John H., Floi Bucao, Christabel, Robinson‐Rechavi, Marc, Bobe, Julien, Herpin, Amaury, Guiguen, Yann, DeWoody, Andrew

Source: Molecular ecology resources. 22(6):2411-2428

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100154990649.0x000001&indx=1&recIds=ETOCvdc_100154990649.0x000001

Generation of a chromosome‐level genome assembly for Pacific halibut (Hippoglossus stenolepis) and characterization of its sex‐determining genomic region

Authors: Jasonowicz, Andrew J., Simeon, Anna, Zahm, Margot, Cabau, Cédric, Klopp, Christophe, Roques, Céline, Iampietro, Carole, Lluch, Jérôme, Donnadieu, Cécile, Parrinello, Hugues, Drinan, Daniel P., Hauser, Lorenz, Guiguen, Yann, Planas, Josep V.

Source: Molecular ecology resources. 22(7):2685-2700

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100159925715.0x000001&indx=1&recIds=ETOCvdc_100159925715.0x000001

A chromosome-level, haplotype-phased Vanilla planifolia genome highlights the challenge of partial endoreplication for accurate whole-genome assembly

Authors: Piet, Quentin, Droc, Gaetan, Marande, William, Sarah, Gautier, Bocs, Stéphanie, Klopp, Christophe, Bourge, Mickael, Siljak-Yakovlev, Sonja, Bouchez, Olivier, Lopez-Roques, Céline, Lepers-Andrzejewski, Sandra, Bourgois, Laurent, Zucca, Joseph, Dron, Michel, Besse, Pascale, Grisoni, Michel, Jourda, Cyril, Charron, Carine

Source: In Plant Communications 12 September 2022 3(5)

Meta-omics Provides Insights into the Impact of Hydrocarbon Contamination on Microbial Mat Functioning

Authors: Aubé, Johanne, Senin, Pavel, Bonin, Patricia, Pringault, Olivier, Jeziorski, Céline, Bouchez, Olivier, Klopp, Christophe, Guyoneaud, Rémy, Goñi-Urriza, Marisol

Source: Microbial Ecology, 2020 Aug 01. 80(2), 286-295.

Access URL: https://www.jstor.org/stable/48740072

Neurodevelopment vs. the immune system: Complementary contributions of maternally-inherited gene transcripts and proteins to successful embryonic development in fish

Authors: Żarski, Daniel, Le Cam, Aurelie, Frohlich, Thomas, Kösters, Miwako, Klopp, Christophe, Nynca, Joanna, Ciesielski, Sławomir, Sarosiek, Beata, Dryl, Katarzyna, Montfort, Jerome, Król, Jarosław, Fontaine, Pascal, Ciereszko, Andrzej, Bobe, Julien

Source: In Genomics November 2021 113(6):3811-3826

RADSex: A computational workflow to study sex determination using restriction site‐associated DNA sequencing data

Authors: Feron, Romain, Pan, Qiaowei, Wen, Ming, Imarazene, Boudjema, Jouanno, Elodie, Anderson, Jennifer, Herpin, Amaury, Journot, Laurent, Parrinello, Hugues, Klopp, Christophe, Kottler, Verena A., Roco, Alvaro S., Du, Kang, Kneitz, Susanne, Adolfi, Mateus, Wilson, Catherine A., McCluskey, Braedan, Amores, Angel, Desvignes, Thomas, Goetz, Frederick W., Takanashi, Ato, Kawaguchi, Mari, Detrich, Harry William, Oliveira, Marcos A., Nóbrega, Rafael H., Sakamoto, Takashi, Nakamoto, Masatoshi, Wargelius, Anna, Karlsen, Ørjan, Wang, Zhongwei, Stöck, Matthias, Waterhouse, Robert M., Braasch, Ingo, Postlethwait, John H., Schartl, Manfred, Guiguen, Yann

Source: Molecular ecology resources. 21(5):1715-1731

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100122942762.0x000001&indx=1&recIds=ETOCvdc_100122942762.0x000001

The immune system of sturgeons and paddlefish (Acipenseriformes): a review with new data from a chromosome‐scale sturgeon genome

Authors: Höhne, Christin, Prokopov, Dmitry, Kuhl, Heiner, Du, Kang, Klopp, Christophe, Wuertz, Sven, Trifonov, Vladimir, Stöck, Matthias

Source: Reviews in aquaculture. 13(3):1709-1729

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100122981506.0x000001&indx=1&recIds=ETOCvdc_100122981506.0x000001

Analysis of a shark reveals ancient, Wnt-dependent, habenular asymmetries in vertebrates.

Authors: Lanoizelet, Maxence, Michel, Léo, Lagadec, Ronan, Mayeur, Hélène, Guichard, Lucile, Logeux, Valentin, Séverac, Dany, Martin, Kyle, Klopp, Christophe, Marcellini, Sylvain, Castillo, Héctor, Pollet, Nicolas, Candal, Eva, Debiais-Thibaud, Mélanie, Boisvert, Catherine, Billoud, Bernard, Schubert, Michael, Blader, Patrick, Mazan, Sylvie

Source: Nature Communications; 11/25/2024, Vol. 15 Issue 1, p1-16, 16p

Subject Terms: WNT signal transduction, LAMPREYS, TETRAPODS, VERTEBRATES, TRANSCRIPTOMES, BRACHYDANIO

Genome insights of mercury methylation among Desulfovibrio and Pseudodesulfovibrio strains

Authors: Goñi-Urriza, Marisol, Klopp, Christophe, Ranchou-Peyruse, Magali, Ranchou-Peyruse, Anthony, Monperrus, Mathilde, Khalfaoui-Hassani, Bahia, Guyoneaud, Rémy

Source: In Research in Microbiology January-February 2020 171(1):3-12

Transcriptomic view of detached lettuce leaves during storage: A crosstalk between wounding, dehydration and senescence

Authors: Ripoll, Julie, Charles, Florence, Vidal, Véronique, Laurent, Sandrine, Klopp, Christophe, Lauri, Félicie, Sallanon, Huguette, Roux, David

Source: In Postharvest Biology and Technology June 2019 152:73-88

Genome structure and content of the rice root‐knot nematode (Meloidogyne graminicola)

Authors: Phan, Ngan Thi, Orjuela, Julie, Danchin, Etienne G. J., Klopp, Christophe, Perfus‐Barbeoch, Laetitia, Kozlowski, Djampa K., Koutsovoulos, Georgios D., Lopez‐Roques, Céline, Bouchez, Olivier, Zahm, Margot, Besnard, Guillaume, Bellafiore, Stéphane

Source: Ecology and evolution. 10(20):11006-11021

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100138906340.0x000001&indx=1&recIds=ETOCvdc_100138906340.0x000001

Responses to iron oxide and zinc oxide nanoparticles in echinoderm embryos and microalgae: uptake, growth, morphology, and transcriptomic analysis

Authors: Genevière, Anne-Marie, Derelle, Evelyne, Escande, Marie-Line, Grimsley, Nigel, Klopp, Christophe, Ménager, Christine, Michel, Aude, Moreau, Hervé

Source: Nanotoxicology. 14(10):1342-1361

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100112960880.0x000001&indx=1&recIds=ETOCvdc_100112960880.0x000001

Venom Peptide Repertoire of the European Myrmicine Ant Manica rubida: Identification of Insecticidal Toxins

Authors: Touchard, Axel, Aili, Samira R., Téné, Nathan, Barassé, Valentine, Klopp, Christophe, Dejean, Alain, Kini, R. Manjunatha, Mrinalini, Coquet, Laurent, Jouenne, Thierry

Source: Journal of proteome research. 19(4):1800-1811

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN623953610&indx=1&recIds=ETOCRN623953610

Characterization of a Y‐specific duplication/insertion of the anti‐Mullerian hormone type II receptor gene based on a chromosome‐scale genome assembly of yellow perch, Perca flavescens

Authors: Feron, Romain, Zahm, Margot, Cabau, Cédric, Klopp, Christophe, Roques, Céline, Bouchez, Olivier, Eché, Camille, Valière, Sophie, Donnadieu, Cécile, Haffray, Pierrick, Bestin, Anastasia, Morvezen, Romain, Acloque, Hervé, Euclide, Peter T., Wen, Ming, Jouano, Elodie, Schartl, Manfred, Postlethwait, John H., Schraidt, Claire, Christie, Mark R., Larson, Wesley A., Herpin, Amaury, Guiguen, Yann

Source: Molecular ecology resources. 20(2):531-543

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100103234589.0x000001&indx=1&recIds=ETOCvdc_100103234589.0x000001

Domestication modulates the expression of genes involved in neurogenesis in high‐quality eggs of Sander lucioperca

Authors: Żarski, Daniel, Le Cam, Aurelie, Nynca, Joanna, Klopp, Christophe, Ciesielski, Sławomir, Sarosiek, Beata, Montfort, Jerome, Król, Jarosław, Fontaine, Pascal, Ciereszko, Andrzej, Bobe, Julien

Source: Molecular reproduction and development. 87(9):934-951

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100108115185.0x000001&indx=1&recIds=ETOCvdc_100108115185.0x000001