Switching of OAS1 splicing isoforms overcomes SNP-derived vulnerability to SARS-CoV-2 infection

Authors: Kei Iida, Masahiko Ajiro, Akiko Nakano-Kobayashi, Yukiko Muramoto, Toru Takenaga, Masatsugu Denawa, Ryo Kurosawa, Takeshi Noda, Masatoshi Hagiwara

Source: BMC Biology, Vol 23, Iss 1, Pp 1-13 (2025)

Subject Terms: SARS-CoV-2, Innate immunity, RNA splicing, Small chemical compound, OAS1, SRSF6, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1741-7007

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Lattice study on finite density QC2D towards zero temperature

Authors: Kei Iida, Etsuko Itou, Kotaro Murakami, Daiki Suenaga

Source: Journal of High Energy Physics, Vol 2024, Iss 10, Pp 1-29 (2024)

Subject Terms: Non-Zero Temperature and Density, Other Lattice Field Theories, Phase Transitions, Nuclear and particle physics. Atomic energy. Radioactivity, QC770-798

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Relation: https://doaj.org/toc/1029-8479

Access URL: https://doaj.org/article/8cd674f3fd424a9ebba49a07981b2e0a

Sodium‐Glucose Cotransporter 2 Inhibitors for Mesenchymal–Epithelial Transition Inhibitor‐Induced Edema

Authors: Takuya Oyakawa, Keita Miura, Nao Muraoka, Kei Iida, Ayano Fujita, Tateaki Naito, Toshiaki Takahashi

Source: Thoracic Cancer, Vol 16, Iss 2, Pp n/a-n/a (2025)

Subject Terms: cardio‐oncology, edema, lung cancer, MET, SGLT2 inhibitor, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1759-7706; https://doaj.org/toc/1759-7714

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MicroRNA-3145 as a potential therapeutic target for hepatitis B virus: inhibition of viral replication via downregulation of HBS and HBX

Authors: Amrizal Muchtar, Daichi Onomura, Dan Ding, Hironori Nishitsuji, Kunitada Shimotohno, Shunpei Okada, Keiji Ueda, Koichi Watashi, Takaji Wakita, Kei Iida, Hironori Yoshiyama, Hisashi Iizasa

Source: Frontiers in Microbiology, Vol 15 (2025)

Subject Terms: hepatitis B virus, microRNA, endoplasmic reticulum stress, anti-viral drug, hepatocellular carcinoma, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2024.1499216/full; https://doaj.org/toc/1664-302X

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Intersections of ultracold atomic polarons and nuclear clusters: how is a chart of nuclides modified in dilute neutron matter?

Authors: Hiroyuki Tajima, Hajime Moriya, Wataru Horiuchi, Eiji Nakano, Kei Iida

Source: AAPPS Bulletin, Vol 34, Iss 1, Pp 1-13 (2024)

Subject Terms: Polaron, Nuclear cluster, Ultracold atoms, Neutron star, Physics, QC1-999

File Description: electronic resource

Relation: https://doaj.org/toc/2309-4710

Access URL: https://doaj.org/article/6737016dbcaf49a9b9f84cca6abb128a

Chemical potential (in)dependence of hadron scatterings in the hadronic phase of QCD-like theories and its applications

Authors: Kotaro Murakami, Etsuko Itou, Kei Iida

Source: Journal of High Energy Physics, Vol 2024, Iss 2, Pp 1-33 (2024)

Subject Terms: Hadronic Spectroscopy, Structure and Interactions, Lattice QCD, Non-Zero Temperature and Density, Nuclear and particle physics. Atomic energy. Radioactivity, QC770-798

File Description: electronic resource

Relation: https://doaj.org/toc/1029-8479

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Secretory GFP reconstitution labeling of neighboring cells interrogates cell–cell interactions in metastatic niches

Authors: Misa Minegishi, Takahiro Kuchimaru, Kaori Nishikawa, Takayuki Isagawa, Satoshi Iwano, Kei Iida, Hiromasa Hara, Shizuka Miura, Marika Sato, Shigeaki Watanabe, Akifumi Shiomi, Yo Mabuchi, Hiroshi Hamana, Hiroyuki Kishi, Tatsuyuki Sato, Daigo Sawaki, Shigeru Sato, Yutaka Hanazono, Atsushi Suzuki, Takahide Kohro, Tetsuya Kadonosono, Tomomi Shimogori, Atsushi Miyawaki, Norihiko Takeda, Hirofumi Shintaku, Shinae Kizaka-Kondoh, Satoshi Nishimura

Source: Nature Communications, Vol 14, Iss 1, Pp 1-12 (2023)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/c373ff5e397541ef903bbdc92c8afb6e

PDIVAS: Pathogenicity predictor for Deep-Intronic Variants causing Aberrant Splicing

Authors: Ryo Kurosawa, Kei Iida, Masahiko Ajiro, Tomonari Awaya, Mamiko Yamada, Kenjiro Kosaki, Masatoshi Hagiwara

Source: BMC Genomics, Vol 24, Iss 1, Pp 1-14 (2023)

Subject Terms: Pathogenicity prediction, RNA splicing, Deep intron, Non-coding region, Genomics, Machine learning, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/abe57e8f8eeb4c5d89716d6f96612afb

Polaronic proton and diproton clustering in neutron-rich matter

Authors: Hiroyuki Tajima, Hajime Moriya, Wataru Horiuchi, Eiji Nakano, Kei Iida

Source: Physics Letters B, Vol 851, Iss , Pp 138567- (2024)

Subject Terms: Polaron, Nuclear matter, Neutron star, Diproton, Physics, QC1-999

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S0370269324001254; https://doaj.org/toc/0370-2693

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Integrated-gut-liver-on-a-chip platform as an in vitro human model of non-alcoholic fatty liver disease

Authors: Jiandong Yang, Yoshikazu Hirai, Kei Iida, Shinji Ito, Marika Trumm, Shiho Terada, Risako Sakai, Toshiyuki Tsuchiya, Osamu Tabata, Ken-ichiro Kamei

Source: Communications Biology, Vol 6, Iss 1, Pp 1-14 (2023)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/554a28702a274231bfba91a90f5384a0

Involvement of endothelins in neuroprotection of valosin-containing protein modulators against retinal ganglion cell damage

Authors: Mami Kusaka, Tomoko Hasegawa, Hanako Ohashi Ikeda, Yumi Inoue, Sachiko Iwai, Kei Iida, Akitaka Tsujikawa

Source: Scientific Reports, Vol 12, Iss 1, Pp 1-13 (2022)

Subject Terms: Medicine, Science

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Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/44f2ff13484e4b9eacd2fef715482e6d

Identification of the α2 chain of interleukin‐13 receptor as a potential biomarker for predicting castration resistance of prostate cancer using patient‐derived xenograft models

Authors: Takahiro Nagai, Naoki Terada, Masato Fujii, Yasuhisa Nagata, Kozue Nakahara, Shoichiro Mukai, Kosuke Okasho, Yuki Kamiyama, Shusuke Akamatsu, Takashi Kobayashi, Kei Iida, Masatsugu Denawa, Masatoshi Hagiwara, Takahiro Inoue, Osamu Ogawa, Toshiyuki Kamoto

Source: Cancer Reports, Vol 6, Iss 2, Pp n/a-n/a (2023)

Subject Terms: biomarker, castration resistance, Interleukin‐13 receptor α2, patient‐derived xenograft, prostate cancer, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2573-8348

Access URL: https://doaj.org/article/cd24ac9cd5a24e39b79a1d9f3a01026d

Equation of state of neutron star matter and its warm extension with an interacting hadron resonance gas

Authors: Yuki Fujimoto, Kenji Fukushima, Yoshimasa Hidaka, Atsuki Hiraguchi, Kei Iida

Source: Physics Letters B, Vol 835, Iss , Pp 137524- (2022)

Subject Terms: Physics, QC1-999

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S037026932200658X; https://doaj.org/toc/0370-2693

Access URL: https://doaj.org/article/9ee7ba59288a4913abed2f8716ce4adb

Therapeutic manipulation of IKBKAP mis-splicing with a small molecule to cure familial dysautonomia

Authors: Masahiko Ajiro, Tomonari Awaya, Young Jin Kim, Kei Iida, Masatsugu Denawa, Nobuo Tanaka, Ryo Kurosawa, Shingo Matsushima, Saiko Shibata, Tetsunori Sakamoto, Rolenz Studer, Adrian R. Krainer, Masatoshi Hagiwara

Source: Nature Communications, Vol 12, Iss 1, Pp 1-12 (2021)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/41819a0db2e34aa3ab64cc45ca2565eb

CDC2-like (CLK) protein kinase inhibition as a novel targeted therapeutic strategy in prostate cancer

Authors: Simon Uzor, Sean R. Porazinski, Ling Li, Bethany Clark, Masahiko Ajiro, Kei Iida, Masatoshi Hagiwara, Abdullah A. Alqasem, Claire M. Perks, Ian D. Wilson, Sebastian Oltean, Michael R. Ladomery

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-12 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/1595aa359a334c009f784001b7ba6977

Cooper triples in attractive three-component fermions: Implication for hadron-quark crossover

Authors: Hiroyuki Tajima, Shoichiro Tsutsui, Takahiro M. Doi, Kei Iida

Source: Physical Review Research, Vol 4, Iss 1, p L012021 (2022)

Subject Terms: Physics, QC1-999

File Description: electronic resource

Relation: https://doaj.org/toc/2643-1564

Access URL: https://doaj.org/article/0b5c0cf013ea4506805fe160ec67bb8e

Two-colour QCD phases and the topology at low temperature and high density

Authors: Kei Iida, Etsuko Itou, Tong-Gyu Lee

Source: Journal of High Energy Physics, Vol 2020, Iss 1, Pp 1-21 (2020)

Subject Terms: Lattice QCD, Phase Diagram of QCD, Nuclear and particle physics. Atomic energy. Radioactivity, QC770-798

File Description: electronic resource

Relation: https://doaj.org/toc/1029-8479

Access URL: https://doaj.org/article/8bb11880685f414a89aed4e356d8018b

Multilateral Bioinformatics Analyses Reveal the Function-Oriented Target Specificities and Recognition of the RNA-Binding Protein SFPQ

Authors: Kei Iida, Masatoshi Hagiwara, Akihide Takeuchi

Source: iScience, Vol 23, Iss 7, Pp 101325- (2020)

Subject Terms: Structural Biology, Protein Structure Aspects, Bioinformatics, Science

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2589004220305125; https://doaj.org/toc/2589-0042

Access URL: https://doaj.org/article/699d15afff3e44f3962a1943576af716

Loss of RNA-Binding Protein Sfpq Causes Long-Gene Transcriptopathy in Skeletal Muscle and Severe Muscle Mass Reduction with Metabolic Myopathy

Authors: Motoyasu Hosokawa, Akihide Takeuchi, Jun Tanihata, Kei Iida, Shin'ichi Takeda, Masatoshi Hagiwara

Source: iScience, Vol 13, Iss , Pp 229-242 (2019)

Subject Terms: Science

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2589004219300574; https://doaj.org/toc/2589-0042

Access URL: https://doaj.org/article/82ff33834e4d41dabc407e2f4f782a6d

SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology

Authors: Mahmoud N. Abdelmoez, Kei Iida, Yusuke Oguchi, Hidekazu Nishikii, Ryuji Yokokawa, Hidetoshi Kotera, Sotaro Uemura, Juan G. Santiago, Hirofumi Shintaku

Source: Genome Biology, Vol 19, Iss 1, Pp 1-11 (2018)

Subject Terms: Single cell, RNA-seq, Microfluidics, RNA transport, Splicing, Isotachophoresis, Biology (General), QH301-705.5, Genetics, QH426-470

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s13059-018-1446-9; https://doaj.org/toc/1474-760X

Access URL: https://doaj.org/article/a25df1d8930847d780c622981c9a8d5e