Domino Tile Placing on Graphs

Authors: Kagan, Jacob J.

Subject Terms: Mathematics - Probability, 60G10, 60K35, 82B20, 82C20

Access URL: http://arxiv.org/abs/1808.06163

A Urine Exosome Gene Expression Panel Distinguishes between Indolent and Aggressive Prostate Cancers at Biopsy

Authors: Kohaar, Indu, Chen, Yongmei, Banerjee, Sreedatta, Borbiev, Talaibek, Kuo, Huai-Ching, Ali, Amina, Ravindranath, Lakshmi, Kagan, Jacob, Srivastava, Sudhir, Dobi, Albert, Sesterhenn, Isabell A., Rosner, Inger L., Cullen, Jennifer, Srivastava, Shiv, Petrovics, Gyorgy

Source: Journal of urology. 205(2):420-425

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100184805889.0x000001&indx=1&recIds=ETOCvdc_100184805889.0x000001

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

Authors: Aberle, Denise, Achilefu, Samuel I., Ademuyiwa, Foluso O., Adey, Andrew C., Aft, Rebecca L., Agarwal, Rachana, Aguilar, Ruben A., Alikarami, Fatemeh, Allaj, Viola, Amos, Christopher, Anders, Robert A., Angelo, Michael R., Anton, Kristen, Ashenberg, Orr, Aster, Jon C., Babur, Ozgun, Bahmani, Amir, Balsubramani, Akshay, Barrett, David, Beane, Jennifer, Bender, Diane E., Bernt, Kathrin, Berry, Lynne, Betts, Courtney B., Bletz, Julie, Blise, Katie, Boire, Adrienne, Boland, Genevieve, Borowsky, Alexander, Bosse, Kristopher, Bott, Matthew, Boyden, Ed, Brooks, James, Bueno, Raphael, Burlingame, Erik A., Cai, Qiuyin, Campbell, Joshua, Caravan, Wagma, Cerami, Ethan, Chaib, Hassan, Chan, Joseph M., Chang, Young Hwan, Chatterjee, Deyali, Chaudhary, Ojasvi, Chen, Alyce A., Chen, Bob, Chen, Changya, Chen, Chia-hui, Chen, Feng, Chen, Yu-An, Chheda, Milan G., Chin, Koei, Chiu, Roxanne, Chu, Shih-Kai, Chuaqui, Rodrigo, Chun, Jaeyoung, Cisneros, Luis, Coffey, Robert J., Colditz, Graham A., Cole, Kristina, Collins, Natalie, Contrepois, Kevin, Coussens, Lisa M., Creason, Allison L., Crichton, Daniel, Curtis, Christina, Davidsen, Tanja, Davies, Sherri R., de Bruijn, Ino, Dellostritto, Laura, De Marzo, Angelo, Demir, Emek, DeNardo, David G., Diep, Dinh, Ding, Li, Diskin, Sharon, Doan, Xengie, Drewes, Julia, Dubinett, Stephen, Dyer, Michael, Egger, Jacklynn, Eng, Jennifer, Engelhardt, Barbara, Erwin, Graham, Esplin, Edward D., Esserman, Laura, Felmeister, Alex, Feiler, Heidi S., Fields, Ryan C., Fisher, Stephen, Flaherty, Keith, Flournoy, Jennifer, Ford, James M., Fortunato, Angelo, Frangieh, Allison, Frye, Jennifer L., Fulton, Robert S., Galipeau, Danielle, Gan, Siting, Gao, Jianjiong, Gao, Long, Gao, Peng, Gao, Vianne R., Geiger, Tim, George, Ajit, Getz, Gad, Ghosh, Sharmistha, Giannakis, Marios, Gibbs, David L., Gillanders, William E., Goecks, Jeremy, Goedegebuure, Simon P., Gould, Alanna, Gowers, Kate, Gray, Joe W., Greenleaf, William, Gresham, Jeremy, Guerriero, Jennifer L., Guha, Tuhin K., Guimaraes, Alexander R., Guinney, Justin, Gutman, David, Hacohen, Nir, Hanlon, Sean, Hansen, Casey R., Harismendy, Olivier, Harris, Kathleen A., Hata, Aaron, Hayashi, Akimasa, Heiser, Cody, Helvie, Karla, Herndon, John M., Hirst, Gilliam, Hodi, Frank, Hollmann, Travis, Horning, Aaron, Hsieh, James J., Hughes, Shannon, Huh, Won Jae, Hunger, Stephen, Hwang, Shelley E., Iacobuzio-Donahue, Christine A., Ijaz, Heba, Izar, Benjamin, Jacobson, Connor A., Janes, Samuel, Jané-Valbuena, Judit, Jayasinghe, Reyka G., Jiang, Lihua, Johnson, Brett E., Johnson, Bruce, Ju, Tao, Kadara, Humam, Kaestner, Klaus, Kagan, Jacob, Kalinke, Lukas, Keith, Robert, Khan, Aziz, Kibbe, Warren, Kim, Albert H., Kim, Erika, Kim, Junhyong, Kolodzie, Annette, Kopytra, Mateusz, Kotler, Eran, Krueger, Robert, Krysan, Kostyantyn, Kundaje, Anshul, Ladabaum, Uri, Lake, Blue B., Lam, Huy, Laquindanum, Rozelle, Lau, Ken S., Laughney, Ashley M., Lee, Hayan, Lenburg, Marc, Leonard, Carina, Leshchiner, Ignaty, Levy, Rochelle, Li, Jerry, Lian, Christine G., Lim, Kian-Huat, Lin, Jia-Ren, Lin, Yiyun, Liu, Qi, Liu, Ruiyang, Lively, Tracy, Longabaugh, William J.R., Longacre, Teri, Ma, Cynthia X., Macedonia, Mary Catherine, Madison, Tyler, Maher, Christopher A., Maitra, Anirban, Makinen, Netta, Makowski, Danika, Maley, Carlo, Maliga, Zoltan, Mallo, Diego, Maris, John, Markham, Nick, Marks, Jeffrey, Martinez, Daniel, Mashl, Robert J., Masilionais, Ignas, Mason, Jennifer, Massagué, Joan, Massion, Pierre, Mattar, Marissa, Mazurchuk, Richard, Mazutis, Linas, Mazzilli, Sarah A., McKinley, Eliot T., McMichael, Joshua F., Merrick, Daniel, Meyerson, Matthew, Miessner, Julia R., Mills, Gordon B., Mills, Meredith, Mondal, Suman B., Mori, Motomi, Mori, Yuriko, Moses, Elizabeth, Mosse, Yael, Muhlich, Jeremy L., Murphy, George F., Navin, Nicholas E., Nawy, Tal, Nederlof, Michel, Ness, Reid, Nevins, Stephanie, Nikolov, Milen, Nirmal, Ajit Johnson, Nolan, Garry, Novikov, Edward, Oberdoerffer, Philipp, O’Connell, Brendan, Offin, Michael, Oh, Stephen T., Olson, Anastasiya, Ooms, Alex, Ossandon, Miguel, Owzar, Kouros, Parmar, Swapnil, Patel, Tasleema, Patti, Gary J., Pe’er, Dana, Pe'er, Itsik, Peng, Tao, Persson, Daniel, Petty, Marvin, Pfister, Hanspeter, Polyak, Kornelia, Pourfarhangi, Kamyar, Puram, Sidharth V., Qiu, Qi, Quintanal-Villalonga, Álvaro, Raj, Arjun, Ramirez-Solano, Marisol, Rashid, Rumana, Reeb, Ashley N., Regev, Aviv, Reid, Mary, Resnick, Adam, Reynolds, Sheila M., Riesterer, Jessica L., Rodig, Scott, Roland, Joseph T., Rosenfield, Sonia, Rotem, Asaf, Roy, Sudipta, Rozenblatt-Rosen, Orit, Rudin, Charles M., Ryser, Marc D., Santagata, Sandro, Santi-Vicini, Maria, Sato, Kazuhito, Schapiro, Denis, Schrag, Deborah, Schultz, Nikolaus, Sears, Cynthia L., Sears, Rosalie C., Sen, Subrata, Sen, Triparna, Shalek, Alex, Sheng, Jeff, Sheng, Quanhu, Shoghi, Kooresh I., Shrubsole, Martha J., Shyr, Yu, Sibley, Alexander B., Siex, Kiara, Simmons, Alan J., Singer, Dinah S., Sivagnanam, Shamilene, Slyper, Michal, Snyder, Michael P., Sokolov, Artem, Song, Sheng-Kwei, Sorger, Peter K., Southard-Smith, Austin, Spira, Avrum, Srivastava, Sudhir, Stein, Janet, Storm, Phillip, Stover, Elizabeth, Strand, Siri H., Su, Timothy, Sudar, Damir, Sullivan, Ryan, Surrey, Lea, Suvà, Mario, Tan, Kai, Terekhanova, Nadezhda V., Ternes, Luke, Thammavong, Lisa, Thibault, Guillaume, Thomas, George V., Thorsson, Vésteinn, Todres, Ellen, Tran, Linh, Tyler, Madison, Uzun, Yasin, Vachani, Anil, Van Allen, Eliezer, Vandekar, Simon, Veis, Deborah J., Vigneau, Sébastien, Vossough, Arastoo, Waanders, Angela, Wagle, Nikhil, Wang, Liang-Bo, Wendl, Michael C., West, Robert, Williams, Elizabeth H., Wu, Chi-yun, Wu, Hao, Wu, Hung-Yi, Wyczalkowski, Matthew A., Xie, Yubin, Yang, Xiaolu, Yapp, Clarence, Yu, Wenbao, Yuan, Yinyin, Zhang, Dadong, Zhang, Kun, Zhang, Mianlei, Zhang, Nancy, Zhang, Yantian, Zhao, Yanyan, Zhou, Daniel Cui, Zhou, Zilu, Zhu, Houxiang, Zhu, Qin, Zhu, Xiangzhu, Zhu, Yuankun, Zhuang, Xiaowei, Hupalowska, Anna, Rood, Jennifer E., Hanlon, Sean E., Hughes, Shannon K., Hwang, E. Shelley, Johnson, Bruce E., Shalek, Alex K., Spira, Avrum E., West, Robert B.

Source: In Cell 16 April 2020 181(2):236-249

Stretch IDLA

Authors: Berger, Noam, Kagan, Jacob J., Procaccia, Eviatar B.

Subject Terms: Mathematics - Probability

Access URL: http://arxiv.org/abs/1209.3112

National Cancer Institute Think-Tank Meeting Report on Proteomic Cartography and Biomarkers at the Single-Cell Level: Interrogation of Premalignant Lesions

Authors: Kagan, Jacob, Moritz, Robert L., Mazurchuk, Richard, Lee, Je Hyuk, Kharchenko, Peter Vasili, Rozenblatt-Rosen, Orit, Ruppin, Eytan, Edfors, Fredrik, Ginty, Fiona, Goltsev, Yury

Source: Journal of proteome research. 19(5):1900-1912

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN624008207&indx=1&recIds=ETOCRN624008207

Predicting Prostate Cancer Progression as a Function of ETS-related Gene Status, Race, and Obesity in a Longitudinal Patient Cohort

Authors: Cullen, Jennifer, Young, Denise, Chen, Yongmei, Degon, Michael, Farrell, James, Sedarsky, Jason, Baptiste, Wagner, Rosen, Philip, Tolstikov, Vladimir, Kiebish, Michael, Kagan, Jacob, Srivastava, Sudhir, Kuo, Huai-Ching, Moncur, Joel T., Rosner, Inger L., Narain, Niven, Akmaev, Viatcheslav, Petrovics, Gyorgy, Dobi, Albert, McLeod, David G., Srivastava, Shiv, Sesterhenn, Isabell A.

Source: In European Urology Focus December 2018 4(6):818-824

The Making of a PreCancer Atlas: Promises, Challenges, and Opportunities

Authors: Boja, Emily, Chuaqui, Rodrigo, Chavarria-Johnson, Eric, Davidsen, Tanja, Eary, Janet, Haim, Todd, Hanlon, Sean, Hewitt, Stephen, Hughes, Shannon, Jacobs, Paula, Li, Jerry, Lively, Tracy, Lockett, Stephen, Misteli, Tom, Nelson, Stefanie, Odeh, Hana, Ossandon, Miguel, Rosenfield, Sonia, Samimi, Goli, Shern, Jack, Star, Rob, Takebe, Naoko, Tavares, Norbert, Tricoli, James, Trimble, Ted, Umar, Asad, Velazquez, Jose, Wang, Chiayeng, Zenklusen, JC, Oberdoerffer, Philipp, Lee, Jerry, Kenney, Nicholas, Srivastava, Sudhir, Ghosh, Sharmistha, Kagan, Jacob, Mazurchuk, Richard

Source: In Trends in Cancer August 2018 4(8):523-536

A novel genomic alteration of LSAMP associates with aggressive prostate cancer in African American men

Authors: Petrovics, Gyorgy, Li, Hua, Stümpel, Tanja, Tan, Shyh-Han, Young, Denise, Katta, Shilpa, Li, Qiyuan, Ying, Kai, Klocke, Bernward, Ravindranath, Lakshmi, Kohaar, Indu, Chen, Yongmei, Ribli, Dezső, Grote, Korbinian, Zou, Hua, Cheng, Joseph, Dalgard, Clifton L., Zhang, Shimin, Csabai, István, Kagan, Jacob, Takeda, David, Loda, Massimo, Srivastava, Sudhir, Scherf, Matthias, Seifert, Martin, Gaiser, Timo, McLeod, David G., Szallasi, Zoltan, Ebner, Reinhard, Werner, Thomas, Sesterhenn, Isabell A., Freedman, Matthew, Dobi, Albert, Srivastava, Shiv

Source: In EBioMedicine December 2015 2(12):1957-1964

Quantification of mutant SPOP proteins in prostate cancer using mass spectrometry-based targeted proteomics

Authors: Wang, Hui, Barbieri, Christopher, He, Jintang, Gao, Yuqian, Shi, Tujin, Wu, Chaochao, Schepmoes, Athena, Fillmore, Thomas, Chae, Sung-Suk, Huang, Dennis, Mosquera, Juan, Qian, Wei-Jun, Smith, Richard, Srivastava, Sudhir, Kagan, Jacob, Camp, David, Rodland, Karin, Rubin, Mark, Liu, Tao

Source: Journal of translational medicine. 15(1):1-10

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100140034314.0x000001&indx=1&recIds=ETOCvdc_100140034314.0x000001

Reversible Capture and Release of Cl~2 and Br~2 with a Redox-Active Metal—Organic Framework

Authors: Tulchinsky, Yuri, Hendon, Christopher H., Lomachenko, Kirill A., Borfecchia, Elisa, Melot, Brent C., Hudson, Matthew R., Tarver, Jacob D., Korzyński, Maciej D., Stubbs, Amanda W., Kagan, Jacob J.

Source: Journal of the American Chemical Society. 139(16):5992-5997

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN611152990&indx=1&recIds=ETOCRN611152990

Antibody-independent targeted quantification of TMPRSS2-ERG fusion protein products in prostate cancer

Authors: He, Jintang, Sun, Xuefei, Shi, Tujin, Schepmoes, Athena A., Fillmore, Thomas L., Petyuk, Vladislav A., Xie, Fang, Zhao, Rui, Gritsenko, Marina A., Yang, Feng, Kitabayashi, Naoki, Chae, Sung-Suk, Rubin, Mark A., Siddiqui, Javed, Wei, John T., Chinnaiyan, Arul M., Qian, Wei-Jun, Smith, Richard D., Kagan, Jacob, Srivastava, Sudhir, Rodland, Karin D., Liu, Tao, Camp, David G., II

Source: In Molecular Oncology October 2014 8(7):1169-1180

The clinical impact of recent advances in LC-MS for cancer biomarker discovery and verification

Authors: Wang, Hui, Shi, Tujin, Qian, Wei-Jun, Liu, Tao, Kagan, Jacob, Srivastava, Sudhir, Smith, Richard D., Rodland, Karin D., Camp, David G.

Source: Expert review of proteomics. 13(1):99-114

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100103526477.0x000001&indx=1&recIds=ETOCvdc_100103526477.0x000001

The Impact of Prostate Volume, Number of Biopsy Cores and American Urological Association Symptom Score on the Sensitivity of Cancer Detection Using the Prostate Cancer Prevention Trial Risk Calculator

Authors: Ankerst, Donna P., Till, Cathee, Boeck, Andreas, Goodman, Phyllis, Tangen, Catherine M., Feng, Ziding, Partin, Alan W., Chan, Daniel W., Sokoll, Lori, Kagan, Jacob, Wei, John T., Thompson, Ian M. ^†

Source: In The Journal of Urology July 2013 190(1):70-76

The PreCancer Atlas (PCA)

Authors: Srivastava, Sudhir, Ghosh, Sharmistha, Kagan, Jacob, Mazurchuk, Richard

Source: In Trends in Cancer August 2018 4(8):513-514

Antibody-free, targeted mass-spectrometric approach for quantification of proteins at low picogram per milliliter levels in human plasma/serum

Authors: Shi, Tujin, Fillmore, Thomas L., Sun, Xuefei, Zhao, Rui, Schepmoes, Athena A., Hossain, Mahmud, Xie, Fang, Wu, Si, Kim, Jong-Seo, Jones, Nathan, Moore, Ronald J., Paša-Tolić, Ljiljana, Kagan, Jacob, Rodland, Karin D., Liu, Tao, Tang, Keqi, Camp, David G., Smith, Richard D., Qian, Wei-Jun

Source: Proceedings of the National Academy of Sciences of the United States of America, 2012 Sep . 109(38), 15395-15400.

Access URL: https://www.jstor.org/stable/41706415

Analysis of serum total and free PSA using immunoaffinity depletion coupled to SRM: correlation with clinical immunoassay tests

Authors: Liu, Tao, Hossain, Mahmud, Schepmoes, Athena A., Fillmore, Thomas L., Sokoll, Lori J., Kronewitter, Scott R., Izmirlian, Grant, Shi, Tujin, Qian, Wei-Jun, Leach, Robin J., Thompson, Ian M., Chan, Daniel W., Smith, Richard D., Kagan, Jacob, Srivastava, Sudhir, Rodland, Karin D., Camp, David G., II

Source: In Journal of Proteomics 3 August 2012 75(15):4747-4757

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Involvement of the TCL5 Gene on Human Chromosome 1 in T-Cell Leukemia and Melanoma

Authors: Finger, Lawrence R., Kagan, Jacob, Christopher, George, Kurtzberg, Joanne, Hershfield, Michael S., Nowell, Peter C., Croce, Carlo M.

Source: Proceedings of the National Academy of Sciences of the United States of America, 1989 Jul 01. 86(13), 5039-5043.

Access URL: https://www.jstor.org/stable/34041

α -Chain Locus of the T-Cell Antigen Receptor is Involved in the t(10;14) Chromosome Translocation of T-Cell Acute Lymphocytic Leukemia

Authors: Kagan, Jacob, Finan, Janet, Letofsky, Jean, Besa, Emmanuel C., Nowell, Peter C., Croce, Carlo M.

Source: Proceedings of the National Academy of Sciences of the United States of America, 1987 Jul 01. 84(13), 4543-4546.

Access URL: https://www.jstor.org/stable/30211

Effects of Verbal and Perceptual Training on Water Level Representation

Authors: Beilin, Harry, Kagan, Jacob, Rabinowitz, Rhea

Source: Child Development, 1966 Jun 01. 37(2), 317-329.

Access URL: https://www.jstor.org/stable/1126806