SimCol3D -- 3D Reconstruction during Colonoscopy Challenge

Authors: Rau, Anita, Bano, Sophia, Jin, Yueming, Azagra, Pablo, Morlana, Javier, Kader, Rawen, Sanderson, Edward, Matuszewski, Bogdan J., Lee, Jae Young, Lee, Dong-Jae, Posner, Erez, Frank, Netanel, Elangovan, Varshini, Raviteja, Sista, Li, Zhengwen, Liu, Jiquan, Lalithkumar, Seenivasan, Islam, Mobarakol, Ren, Hongliang, Lovat, Laurence B., Montiel, José M. M., Stoyanov, Danail

Source: Medical Image Analysis 96 (2024): 103195

Subject Terms: Computer Science - Computer Vision and Pattern Recognition, I.4.5

Access URL: http://arxiv.org/abs/2307.11261

Systematic Review and Meta-analysis: The Three-year Post-colonoscopy Colorectal Cancer Rate as per the World Endoscopy Organization Methodology

Authors: Kader, Rawen ^{1, ∗}, Hadjinicolaou, Andreas V. ^{2, 3}, Burr, Nicholas E. ^{4, 5}, Bassett, Paul ⁶, Ahmad, Omer F. ¹, Pedersen, Lasse ⁷, Chand, Manish ¹, Valori, Roland ⁸, Stoyanov, Danail ¹, Lovat, Laurence B. ¹

Source: In Clinical Gastroenterology and Hepatology March 2025 23(4):519-530

Polyp characterization using deep learning and a publicly accessible polyp video database

Authors: Kader, Rawen, Cid‐Mejias, Anton, Brandao, Patrick, Islam, Shahraz, Hebbar, Sanjith, Puyal, Juana González‐Bueno, Ahmad, Omer F., Hussein, Mohamed, Toth, Daniel, Mountney, Peter, Seward, Ed, Vega, Roser, Stoyanov, Danail, Lovat, Laurence B.

Source: Digestive endoscopy. 35(5):645-655

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100187213950.0x000001&indx=1&recIds=ETOCvdc_100187213950.0x000001

Computer-aided characterization of early cancer in Barrett's esophagus on i-scan magnification imaging: a multicenter international study

Authors: Hussein, Mohamed, Lines, David, González-Bueno Puyal, Juana, Kader, Rawen, Bowman, Nicola, Sehgal, Vinay, Toth, Daniel, Ahmad, Omer F., Everson, Martin, Esteban, Jose Miguel, Bisschops, Raf, Banks, Matthew, Haefner, Michael, Mountney, Peter, Stoyanov, Danail, Lovat, Laurence B., Haidry, Rehan

Source: Gastrointestinal endoscopy. 97(4):646-654

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100185910425.0x000001&indx=1&recIds=ETOCvdc_100185910425.0x000001

Identifying key mechanisms leading to visual recognition errors for missed colorectal polyps using eye‐tracking technology

Authors: Ahmad, Omer F, Mazomenos, Evangelos, Chadebecq, Francois, Kader, Rawen, Hussein, Mohamed, Haidry, Rehan J, Puyal, Juana González‐Bueno, Brandao, Patrick, Toth, Daniel, Mountney, Peter, Seward, Ed, Vega, Roser, Stoyanov, Danail, Lovat, Laurence B

Source: Journal of gastroenterology and hepatology. 38(5):768-774

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100182478878.0x000001&indx=1&recIds=ETOCvdc_100182478878.0x000001

Development of a core descriptor set for Crohn's anal fistula

Authors: Williams, Kate M., Lamidi, Segun, Coe, Peter O., Bordeianou, Liliana G., Hart, Ailsa L., Hind, Daniel, Lindsay, James O., Lobo, Alan J., Myrelid, Pär, Raine, Tim, Sebastian, Shaji, Fearnhead, Nicola S., Lee, Matthew J., Adams, Katie, Almer, Sven, Ananthakrishnan, Ashwin, Bethune, Robert M., Block, Mattias, Brown, Steven R., Cirocco, William C., Cooney, Rachel, Davies, Justin, Atici, Semra D., Dhar, Anjan, Din, Shahida, Drobne, David, Espin‐Basany, Eloy, Evans, Jonathan P., Fleshner, Phillip R., Folkesson, Joakim, Fraser, Aileen, Graf, Wilhelm, Hahnloser, Dieter, Hager, Jakob, Hancock, Laura, Hanzel, Jurij, Hargest, Rachel, Hedin, Charlotte R. H., Hill, James, Ihle, Christof, Jongen, Johannes, Kader, Rawen, Karmiris, Konstantinos, Katsanos, Konstantinos H., Keller, Debby S., Kopylov, Uri, Koutrabakis, Ioannis E., Lamb, Chris A., Landerholm, Kalle, Lee, Grace C., Litta, Francesco, Limdi, Jimmy K., Lopes, Emily W., Madoff, Robert D., Martin, Sean T., Martin‐Perez, Beatriz, Michalopoulos, George, Millan, Monica, Münch, Andreas, Nakov, Radislav, Noor, Nurulamin M., Oresland, Tom, Paquette, Ian M., Pellino, Gianluca, Perra, Teresa, Porcu, Alberto, Roslani, April C., Samaan, M. A., Sebepos‐Rogers, G. M., Segal, Jontahan P., Silva, Shanika, Söderholm, Mattias, Spinelli, Antonio, Speight, Ally, Steinhagen, Randolph M., Stenström, Pernilla, Tsimogiannis, Konstantinos E., Varma, Mika G., Verma, Ajay M., Verstockt, Bram, Warden, Claire, Yassin, Nuha, Zawadzki, Antoni, Carr, Paula, Devlin, Brian, Mannick, Sameer, Avery, Pearl, Gecse, Krisztina B., Goren, Idan, Hellström, Per M., Kotze, Paulo G., McWhirter, Derek, Naik, Amar S., Sammour, Tarik, Selinger, Christian P., Stein, Sharon L., Torres, Joanna, Wexner, Steven D., Younge, Lisa C.

Source: Colorectal disease. 25(4):695-706

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100180703649.0x000001&indx=1&recIds=ETOCvdc_100180703649.0x000001

Polyp detection on video colonoscopy using a hybrid 2D/3D CNN

Authors: González-Bueno Puyal, Juana, Brandao, Patrick, Ahmad, Omer F., Bhatia, Kanwal K., Toth, Daniel, Kader, Rawen, Lovat, Laurence, Mountney, Peter, Stoyanov, Danail

Source: In Medical Image Analysis November 2022 82

Performance of artificial intelligence for detection of subtle and advanced colorectal neoplasia

Authors: Ahmad, Omer F., González‐Bueno Puyal, Juana, Brandao, Patrick, Kader, Rawen, Abbasi, Faisal, Hussein, Mohamed, Haidry, Rehan J., Toth, Daniel, Mountney, Peter, Seward, Ed, Vega, Roser, Stoyanov, Danail, Lovat, Laurence B.

Source: Digestive endoscopy. 34(4):862-869

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100153679131.0x000001&indx=1&recIds=ETOCvdc_100153679131.0x000001

A new artificial intelligence system successfully detects and localises early neoplasia in Barrett's esophagus by using convolutional neural networks

Authors: Hussein, Mohamed, González‐Bueno Puyal, Juana, Lines, David, Sehgal, Vinay, Toth, Daniel, Ahmad, Omer F., Kader, Rawen, Everson, Martin, Lipman, Gideon, Fernandez‐Sordo, Jacobo Ortiz, Ragunath, Krish, Esteban, Jose Miguel, Bisschops, Raf, Banks, Matthew, Haefner, Michael, Mountney, Peter, Stoyanov, Danail, Lovat, Laurence B., Haidry, Rehan

Source: United European Gastroenterology journal. 10(6):528-537

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100159007512.0x000001&indx=1&recIds=ETOCvdc_100159007512.0x000001

Process and Systems: Unlocking the benefits of the Baveno VI guidance when screening for varices: an audit of clinical practice across London

Authors: Colwill, Michael ^*, Lake, Luke, El-Sayed, Ahmed, King, Jonathan, Kader, Rawen, Shakweh, Eathar, Caracostea, Andra, China, Louise, Maurice, James

Source: In Future Healthcare Journal March 2022 9(1):41-44

Endoscopic Polyp Segmentation Using a Hybrid 2D/3D CNN
23rd International conference on medical image computing and computer assisted intervention, MICCAI 2020

Authors: Puyal, Juana González-Bueno, Bhatia, Kanwal K., Brandao, Patrick, Ahmad, Omer F., Toth, Daniel, Kader, Rawen, Lovat, Laurence, Mountney, Peter, Stoyanov, Danail

Source: Lecture notes in computer science. 12266:295-308

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCCN606417309&indx=1&recIds=ETOCCN606417309

Implementation of an intervention bundle leads to quality improvement in ulcerative colitis endoscopy reporting

Authors: Kader, Rawen, Dart, Robin J., Sebepos‐Rogers, Gregory, Shakweh, Eathar, Middleton, Paul, McGuire, Joshua, Pavlidis, Polychronis, Ahmad, Omer F., Segal, Jonathan, Samaan, Mark A., Gahir, Josh, Black, Grace, Theaker, Holly, Calderbank, Tom, Meade, Susanna, Ibraheim, Hajir, Clough, Jennie, Bancil, Aaron, Honap, Sailish, Hampal, Rumneek, Tavabie, Oliver, Tai, Chehkuan, Tern, Paul, Akbar, Sanaith, Patel, Raj, Rhead, Camilla, Kabir, Misha, Bashyam, Maria, Fofaria, Rishi, Hiner, George, Ravindran, Srivathsan, Walton, Hannah, King, Jonathan, Dhillon, Angad, Seller, Penelope, Mukherjee, Sujit, Harlow, Christopher

Source: GastroHep. 2(6):309-317

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100114676205.0x000001&indx=1&recIds=ETOCvdc_100114676205.0x000001

Cancer Biology or Ineffective Surveillance? A Multicentre Retrospective Analysis of Colitis-Associated Post-Colonoscopy Colorectal Cancers.

Authors: Kabir, Misha, Thomas-Gibson, Siwan, Ahmad, Ahmir, Kader, Rawen, Al-Hillawi, Lulia, Mcguire, Joshua, David, Lewis, Shah, Krishna, Rao, Rohit, Vega, Roser, East, James E, Faiz, Omar D, Hart, Ailsa L, Wilson, Ana

Source: Journal of Crohn's & Colitis; May2024, Vol. 18 Issue 5, p686-694, 9p

COMPUTER AIDED DIAGNOSIS FOR THE CHARACTERISATION OF DYSPLASIA IN BARRETT'S ESOPHAGUS WITH MAGNIFICATION ENDOSCOPY ON I-SCAN IMAGING

Authors: Hussein, Mohamed, Lines, David, González-Bueno Puyal, Juana, Bowman, Nicola, Sehgal, Vinay, Toth, Daniel, Everson, Martin A., Ahmad, Omer F., Kader, Rawen, Esteban, Jose Miguel, Bisschops, Raf, Banks, Matthew, Haefner, Michael, Mountney, Peter, Stoyanov, Danail, Lovat, Laurence B., Haidry, Rehan

Source: Gastrointestinal endoscopy. 95(6S):AB249-AB250

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100166501127.0x000001&indx=1&recIds=ETOCvdc_100166501127.0x000001

AUTOMATED MEASUREMENT OF COLONOSCOPY WITHDRAWAL TIME USING CONVOLUTIONAL NEURAL NETWORKS

Authors: Kader, Rawen, De Carvalho, Thomas, Oh, Ga Young, Brandao, Patrick, Leung, Sum-Ping, Toth, Daniel, Vega, Roser, Seward, Edward, Mountney, Peter, Stoyanov, Danail, Lovat, Laurence B.

Source: Gastrointestinal endoscopy. 95(6S):AB242-AB243

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100166501233.0x000001&indx=1&recIds=ETOCvdc_100166501233.0x000001

Towards NHS Zero: greener gastroenterology and the impact of virtual clinics on carbon emissions and patient outcomes. A multisite, observational, cross-sectional study.

Authors: King, Jonathan, Poo, Stephanie X., El-Sayed, Ahmed, Kabir, Misha, Hiner, George, Olabinan, Olaolu, Colwill, Michael, Ayubi, Homira, Shakweh, Eathar, Kronsten, Victoria T., Kader, Rawen, Hayee, Bu'Hussain

Source: Frontline Gastroenterology; Jul2023, Vol. 14 Issue 4, p287-294, 8p

Lynch syndrome: from detection to treatment.

Authors: Williams, Madeleine H., Hadjinicolaou, Andreas V., Norton, Benjamin C., Kader, Rawen, Lovat, Laurence B.

Source: Frontiers in Oncology; 2023, p1-10, 10p

Subject Terms: HEREDITARY nonpolyposis colorectal cancer, COLORECTAL cancer, GASTROINTESTINAL system, ENDOMETRIAL cancer, THERAPEUTICS, TUMORS

SYSTEMATIC REVIEW AND META-ANALYSIS: THE GLOBAL THREE-YEAR POST-COLONOSCOPY COLORECTAL CANCER RATE AS PER THE WORLD ENDOSCOPY ORGANIZATION METHODOLOGY

Authors: Kader, Rawen, Hadjinicolaou, Andreas V., Burr, Nick, Bassett, Paul, Pedersen, Lasse, Chand, Manish, Valori, Roland, Stoyanov, Danail, Lovat, Laurence B.

Source: Gastrointestinal endoscopy. 95(6S):AB102-AB102

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100166504409.0x000001&indx=1&recIds=ETOCvdc_100166504409.0x000001

TRANSFERABILITY OF A CONVOLUTIONAL NEURAL NETWORK TO CHARACTERISE COLORECTAL POLYPS

Authors: Kader, Rawen, Cid-Mejias, Anton, Islam, Shahraz, Hebbar, Sanjith, Brandao, Patrick, Ahmad, Omer F., Hussein, Mohamed, Toth, Daniel, Vega, Roser, Seward, Edward, Kohoutová, Darina, Rejchrt, Stanislav, Bures, Jan, Mountney, Peter, Stoyanov, Danail, Lovat, Laurence B.

Source: Gastrointestinal endoscopy. 95(6S):AB252-AB252

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100166501084.0x000001&indx=1&recIds=ETOCvdc_100166501084.0x000001

Survey on the perceptions of UK gastroenterologists and endoscopists to artificial intelligence.

Authors: Kader, Rawen^1,2,3 rawen.kader.17@ucl.ac.uk, Baggaley, Rebecca F.⁴, Hussein, Mohamed^1,3, Ahmad, Omer F.^2,3, Patel, Nisha⁵, Corbett, Gareth⁶, Dolwani, Sunil⁷, Stoyanov, Danail^1,2, Lovat, Laurence B.^1,2,3

Source: Frontline Gastroenterology. 2022, Vol. 13 Issue 5, p423-429. 7p.