Loss of flavonoids homeostasis leads to pistillody in sua-CMS of Nicotiana tabacum

Authors: Jie Xu, Zhuo Wei, Jugou Liao, Keliang Tao, Junpeng Zhang, Yu Jiang, Yongzhi Niu, Yunye Zheng, Limeng Zhang, Xuemei Wei

Source: BMC Plant Biology, Vol 25, Iss 1, Pp 1-13 (2025)

Subject Terms: Nicotiana tabacum, Pistillody, B-class MADS, Flavonoids, ROS, Botany, QK1-989

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2229

Access URL: https://doaj.org/article/bd0b402df6414edbb5b89b518c79cbea

Transcriptional signatures of secondary hair follicles during annual cashmere growth

Authors: Yanlei Liu, Minglin Wang, Zehao Liu, Xinyue Liang, Shengda Sheng, Han Dai, Junpeng Zhang, Shuyi Zhang, Xinghui Zhang, Huiling Xue

Source: Scientific Data, Vol 11, Iss 1, Pp 1-5 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2052-4463

Access URL: https://doaj.org/article/5fce2a37b98e498ea1a5ae4c5e9fc815

Unveiling bat-borne viruses: a comprehensive classification and analysis of virome evolution

Authors: Yuyang Wang, Panpan Xu, Yelin Han, Wenliang Zhao, Lamei Zhao, Rui Li, Junpeng Zhang, Shuyi Zhang, Jian Lu, Peter Daszak, Qi Jin, Zhiqiang Wu

Source: Microbiome, Vol 12, Iss 1, Pp 1-17 (2024)

Subject Terms: Chiroptera, Bat-borne viruses, Next Generation Sequencing (NGS), Virome, Virus taxonomy, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/0a2fa568a143441a95f10de0543454ca

Scanning sample-specific miRNA regulation from bulk and single-cell RNA-sequencing data

Authors: Junpeng Zhang, Lin Liu, Xuemei Wei, Chunwen Zhao, Yanbi Luo, Jiuyong Li, Thuc Duy Le

Source: BMC Biology, Vol 22, Iss 1, Pp 1-19 (2024)

Subject Terms: miRNA, mRNA, Single-cell RNA-sequencing, Bulk RNA-sequencing, Sample-specific miRNA regulation, Sample correlation network, Biology (General), QH301-705.5

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Relation: https://doaj.org/toc/1741-7007

Access URL: https://doaj.org/article/2c8ac0c8db7e48dc89df860939c4ee48

Modelling cell type-specific lncRNA regulatory network in autism with Cycle

Authors: Chenchen Xiong, Mingfang Zhang, Haolin Yang, Xuemei Wei, Chunwen Zhao, Junpeng Zhang

Source: BMC Bioinformatics, Vol 25, Iss 1, Pp 1-16 (2024)

Subject Terms: Autism spectrum disorder, LncRNA, MRNA, LncRNA regulation, Single-cell RNA sequencing, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2105

Access URL: https://doaj.org/article/e7df9984cba04468889d4c0aced95e80

ZIC3 shapes digit morphogenesis in avian

Authors: Shanshan Li, Shibin Bai, Xiaona Xu, Jialong Yin, Yining Tang, Songyang Shang, Junpeng Zhang, David M. Irwin, Shuyi Zhang, Zhe Wang

Source: Poultry Science, Vol 104, Iss 4, Pp 104927- (2025)

Subject Terms: Bird, Zic3, Overexpression, Transcriptome, Anterior digit, Animal culture, SF1-1100

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Relation: http://www.sciencedirect.com/science/article/pii/S003257912500166X; https://doaj.org/toc/0032-5791

Access URL: https://doaj.org/article/76194b73e78f41b899e5f6f982f509d2

Resting-state EEG microstate analysis reveals potential biomarkers for subclinical insomnia

Authors: Yujie Shi, Mengqi Ji, Fan Zhong, Rui Jiang, Zhuhong Chen, Chi Zhang, Yuting Li, Junpeng Zhang, Wen Wang

Source: Brain-Apparatus Communication, Vol 3, Iss 1 (2024)

Subject Terms: Subclinical insomnia, resting-state EEG, microstate, machine learning, Neurology. Diseases of the nervous system, RC346-429

File Description: electronic resource

Relation: https://doaj.org/toc/2770-6710

Access URL: https://doaj.org/article/9dbe3ad744b94d6195cd352508961d21

Protocol to infer and analyze miRNA sponge modules in heterogeneous data using miRSM 2.0

Authors: Junpeng Zhang, Xuemei Wei, Chunwen Zhao, Haolin Yang

Source: STAR Protocols, Vol 5, Iss 4, Pp 103317- (2024)

Subject Terms: Bioinformatics, Cancer, Systems biology, Science (General), Q1-390

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2666166724004829; https://doaj.org/toc/2666-1667

Access URL: https://doaj.org/article/7cae2c5bdefb4c35be208cd9a8d0f512

Optimizing vitiligo diagnosis with ResNet and Swin transformer deep learning models: a study on performance and interpretability

Authors: Fan Zhong, Kaiqiao He, Mengqi Ji, Jianru Chen, Tianwen Gao, Shuli Li, Junpeng Zhang, Chunying Li

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-15 (2024)

Subject Terms: Vitiligo, Swin transformer, Dermoscopic images, Class activation mapping, Medicine, Science

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Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/9073a335532043febcbabc57e0a7b9d8

Distribution Shifts of Acanthaster solaris Under Climate Change and the Impact on Coral Reef Habitats

Authors: Shangke Su, Jinquan Liu, Bin Chen, Wei Wang, Jiaguang Xiao, Yuan Li, Jianguo Du, Jianhua Kang, Wenjia Hu, Junpeng Zhang

Source: Animals, Vol 15, Iss 6, p 858 (2025)

Subject Terms: crown-of-thorns starfish, climate change, coral reef, species distribution model, distribution change, Veterinary medicine, SF600-1100, Zoology, QL1-991

File Description: electronic resource

Relation: https://www.mdpi.com/2076-2615/15/6/858; https://doaj.org/toc/2076-2615

Access URL: https://doaj.org/article/698abe13a35c4f85b84ece1ef72fe875

The PPO family in Nicotiana tabacum is an important regulator to participate in pollination

Authors: Xuemei Wei, Keliang Tao, Zhengmei Liu, Boyuan Qin, Jie Su, Yanbi Luo, Chunwen Zhao, Jugou Liao, Junpeng Zhang

Source: BMC Plant Biology, Vol 24, Iss 1, Pp 1-13 (2024)

Subject Terms: Nicotiana tabacum, Polyphenol oxidase, Pollen tube growth, Pollination, Botany, QK1-989

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2229

Access URL: https://doaj.org/article/243ea521fff04380aee9c9b268cbdd5f

Biological Characteristics, Genome-wide Characteristics of A Bacteriophage of Vibrio parahaemolyticus and Its Application in Food

Authors: Junpeng ZHANG, Wenting LIU, Tian SHI, Huajuan WANG, Hongxun WANG, Min ZHOU

Source: Shipin gongye ke-ji, Vol 45, Iss 1, Pp 137-144 (2024)

Subject Terms: v. parahaemolyticus phage, separation and purification, optimal infection complex (moi), one-step growth curve, genome, bacteriostatic test, Food processing and manufacture, TP368-456

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Relation: https://doaj.org/toc/1002-0306

Access URL: https://doaj.org/article/f28e5d7c278e40a1a758d4451a3c0a50

Peptidome comparison on the immune regulation effects of different casein fractions in a cyclophosphamide mouse model

Authors: Junpeng Zhang, Xiaomeng Wu, Jinghong Zhao, Xutong Ma, M. Safian Murad, Guangqing Mu

Source: Journal of Dairy Science, Vol 107, Iss 1, Pp 40-61 (2024)

Subject Terms: differential casein composition, peptidome comparison, function effect, Dairy processing. Dairy products, SF250.5-275, Dairying, SF221-250

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Relation: http://www.sciencedirect.com/science/article/pii/S0022030223006689; https://doaj.org/toc/0022-0302

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Impacts of Typhoons on the Evolution of Surface Anticyclonic Eddies into Subsurface Anticyclonic Eddies in the Northwestern Subtropical Pacific Ocean

Authors: Shangzhan Cai, Jindian Xu, Weibo Wang, Chunsheng Jing, Kai Li, Junpeng Zhang, Fangfang Kuang

Source: Remote Sensing, Vol 16, Iss 22, p 4282 (2024)

Subject Terms: typhoon, subsurface anticyclonic eddy, lens-shaped structure, northwestern subtropical Pacific Ocean, potential vorticity, precipitation, Science

File Description: electronic resource

Relation: https://www.mdpi.com/2072-4292/16/22/4282; https://doaj.org/toc/2072-4292

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Saline Water Irrigation Changed the Stability of Soil Aggregates and Crop Yields in a Winter Wheat–Summer Maize Rotation System

Authors: Huimin Yuan, Anqi Zhang, Changkuan Zhu, Hongkai Dang, Chunlian Zheng, Junpeng Zhang, Caiyun Cao

Source: Agronomy, Vol 14, Iss 11, p 2564 (2024)

Subject Terms: saline water irrigation, winter wheat–summer maize rotation system, soil salinity, soil alkalinity, soil sodicity, soil aggregates, Agriculture

File Description: electronic resource

Relation: https://www.mdpi.com/2073-4395/14/11/2564; https://doaj.org/toc/2073-4395

Access URL: https://doaj.org/article/59a476f80e5d4371b09fef75506ec655

Resting-State Electroencephalogram Depression Diagnosis Based on Traditional Machine Learning and Deep Learning: A Comparative Analysis

Authors: Haijun Lin, Jing Fang, Junpeng Zhang, Xuhui Zhang, Weiying Piao, Yukun Liu

Source: Sensors, Vol 24, Iss 21, p 6815 (2024)

Subject Terms: resting-state electroencephalography, major depressive disorder, traditional machine learning, deep learning, artificial intelligence, Chemical technology, TP1-1185

File Description: electronic resource

Relation: https://www.mdpi.com/1424-8220/24/21/6815; https://doaj.org/toc/1424-8220

Access URL: https://doaj.org/article/8ea8afd9dc354f81b0d891571dca61a2

Research Note: SOCS2 contributes to reduction of the third digit during development of the chicken forelimb

Authors: Xiaoping Li, Shanshan Li, Shibin Bai, Yining Tang, Ziqiu Jia, Jialong Yin, Xiaona Xu, Junpeng Zhang, David M. Irwin, Shuyi Zhang, Zhe Wang

Source: Poultry Science, Vol 103, Iss 6, Pp 103672- (2024)

Subject Terms: chicken forelimb, SOCS2, expression pattern, overexpression, mRNA-Seq, Animal culture, SF1-1100

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S0032579124002517; https://doaj.org/toc/0032-5791

Access URL: https://doaj.org/article/14a3a0dba50b40bb8b48c431a1b9d514

Panoramic analysis of coronaviruses carried by representative bat species in Southern China to better understand the coronavirus sphere

Authors: Yelin Han, Panpan Xu, Yuyang Wang, Wenliang Zhao, Junpeng Zhang, Shuyi Zhang, Jianwei Wang, Qi Jin, Zhiqiang Wu

Source: Nature Communications, Vol 14, Iss 1, Pp 1-20 (2023)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/bb3eb35bf6c24d1386e4cd3976aeb088

Effect of Delayed Irrigation at the Jointing Stage on Nitrogen, Silicon Nutrition and Grain Yield of Winter Wheat in the North China Plain

Authors: Hao Zheng, Jinyang Sun, Yueping Liang, Caiyun Cao, Yang Gao, Junpeng Zhang, Hongkai Dang, Chunlian Zheng

Source: Plants, Vol 13, Iss 18, p 2648 (2024)

Subject Terms: wheat, grain yield, nitrogen, silicon, water-saving irrigation, Botany, QK1-989

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Relation: https://www.mdpi.com/2223-7747/13/18/2648; https://doaj.org/toc/2223-7747

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Role of inhibition in overcoming interferences of misconception under similar feature saliency: An eye-tracking study of the projectile motion problem

Authors: Yanrou Wen, Jiabei Lin, Yue Ming, Junpeng Zhang, Xianqiu Wu, Lei Bao, Keke Yu, Yang Xiao

Source: Physical Review Physics Education Research, Vol 20, Iss 2, p 020121 (2024)

Subject Terms: Special aspects of education, LC8-6691, Physics, QC1-999

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Relation: https://doaj.org/toc/2469-9896

Access URL: https://doaj.org/article/bab4b42089c04e9486726ae8dcd29ab3