Transcriptomic analyses of rice (Oryza sativa) genes and non-coding RNAs under nitrogen starvation using multiple omics technologies

Authors: Sang-Yoon Shin, Jin Seo Jeong, Jae Yun Lim, Taewook Kim, June Hyun Park, Ju-Kon Kim, Chanseok Shin

Source: BMC Genomics, Vol 19, Iss 1, Pp 1-20 (2018)

Subject Terms: Long non-coding RNA, microRNA, NGS, Nitrogen starvation, Oryza sativa, Transcriptome, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12864-018-4897-1; https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/b7c8bce3a19047d29b973d1979421030

MicroRNA844-Guided Downregulation of Cytidinephosphate Diacylglycerol Synthase3 (CDS3) mRNA Affects the Response of Arabidopsis thaliana to Bacteria and Fungi

Authors: Hwa Jung Lee, Young Ju Park, Kyung Jin Kwak, Donghyun Kim, June Hyun Park, Jae Yun Lim, Chanseok Shin, Kwang-Yeol Yang, Hunseung Kang

Source: Molecular Plant-Microbe Interactions, Vol 28, Iss 8, Pp 892-900 (2015)

Subject Terms: Microbiology, QR1-502, Botany, QK1-989

File Description: electronic resource

Relation: https://doaj.org/toc/0894-0282; https://doaj.org/toc/1943-7706

Access URL: https://doaj.org/article/03968dac4f1b48f7962e9cd302cd27af

The hot pepper (Capsicum annuum) microRNA transcriptome reveals novel and conserved targets: a foundation for understanding MicroRNA functional roles in hot pepper.

Authors: Dong-Gyu Hwang, June Hyun Park, Jae Yun Lim, Donghyun Kim, Yourim Choi, Soyoung Kim, Gregory Reeves, Seon-In Yeom, Jeong-Soo Lee, Minkyu Park, Seungill Kim, Ik-Young Choi, Doil Choi, Chanseok Shin

Source: PLoS ONE, Vol 8, Iss 5, p e64238 (2013)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3667847?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/1e7db1fb7f1744bcbcb5e8bfd4b5e75d

The role of plant small RNAs in NB-LRR regulation.

Authors: June Hyun Park¹, Chanseok Shin² cshin@snu.ac.kr

Source: Briefings in Functional Genomics. Jul2015, Vol. 14 Issue 4, p268-274. 7p.

Subject Terms: *GENETIC regulation, *PATHOGENIC microorganisms, *METABOLISM, *PLANT development, *NUCLEOTIDE sequence, *GENETICS

Small RNA and transcriptome deep sequencing proffers insight into floral gene regulation in Rosa cultivars.

Authors: Jungeun Kim^1,2, June Hyun Park³, Chan Ju Lim¹, Jae Yun Lim³, Jee-Youn Ryu^4,5, Bong-Woo Lee¹, Jae-Pil Choi¹, Woong Bom Kim¹, Ha Yeon Lee¹, Yourim Choi³, Donghyun Kim³, Cheol-Goo Hur^1,2, Sukweon Kim⁶, Yoo-Sun Noh⁴, Chanseok Shin³ cshin@snu.ac.kr, Suk-Yoon Kwon^1,7 sykwon@kribb.re.kr

Source: BMC Genomics. 2012, Vol. 13 Issue 1, p657-674. 18p. 4 Diagrams, 6 Charts, 1 Graph.

Subject Terms: *ROSE breeding, *GENETIC regulation, *CULTIVARS, *GENE expression, *PHENOTYPES

Slicer-independent mechanism drives small-RNA strand separation during human RISC assembly.

Authors: June Hyun Park, Chanseok Shin

Source: Nucleic Acids Research; 10/30/2015, Vol. 43 Issue 19, p9418-9433, 16p

Effect of the guide strand 3'-end structure on the gene-silencing potency of asymmetric siRNA.

Authors: Sun Woo HONG¹, June Hyun PARK², Soyeong YUN¹, Chang Han LEE¹, Chanseok SHIN^2,3 cshin@snu.ac.kr, Dong-ki LEE¹ dklee@skku.edu

Source: Biochemical Journal. 8/1/2014, Vol. 461 Issue 3, following p427-434. 10p.

Subject Terms: *GENE silencing, *SMALL interfering RNA, *DOUBLE-stranded RNA, *DINUCLEOTIDES, *ARGONAUTE proteins