LabEmbryoCam: An opensource phenotyping system for developing aquatic animals

Authors: Ziad Ibbini, Maria Bruning, Sakina Allili, Luke A Holmes, Ellen Tully, Jamie McCoy, Benjamin Larsen, Tony Wilson, Guy Ludford, Jack Barrett-Kelly, John I. Spicer, Oliver Tills

Source: HardwareX, Vol 20, Iss , Pp e00602- (2024)

Subject Terms: High-dimensional-organismal-phenotyping, Phenomics, Computer vision, Embryos, Timelapse, Science (General), Q1-390

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2468067224000968; https://doaj.org/toc/2468-0672

Access URL: https://doaj.org/article/bc242321f7644cf0838d026634f7a40e

Comparative phenomics: a new approach to study heterochrony

Authors: Jamie C. S. McCoy, John I. Spicer, Simon D. Rundle, Oliver Tills

Source: Frontiers in Physiology, Vol 14 (2023)

Subject Terms: phenomics, heterochrony, evolution, development, embryo, bio-imaging, Physiology, QP1-981

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fphys.2023.1237022/full; https://doaj.org/toc/1664-042X

Access URL: https://doaj.org/article/7a751c90f02643d88128590a0f246ae8

Phenomics as an approach to Comparative Developmental Physiology

Authors: Jamie C. S. McCoy, John I. Spicer, Ziad Ibbini, Oliver Tills

Source: Frontiers in Physiology, Vol 14 (2023)

Subject Terms: phenomics, development, bioimaging, embryonic development, Comparative Developmental Physiology, Physiology, QP1-981

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Relation: https://www.frontiersin.org/articles/10.3389/fphys.2023.1229500/full; https://doaj.org/toc/1664-042X

Access URL: https://doaj.org/article/2fd735fa8e7a450e84ce8fe1883f1e20

Editorial: The adaptation and response of aquatic animals in the context of global climate change

Authors: Da Huo, Juan Diego Gaitán-Espitia, John I. Spicer, Hongsheng Yang

Source: Frontiers in Marine Science, Vol 10 (2023)

Subject Terms: environmental stress, molecular mechanism, aquatic animal, phenotypic plasticity, adaptive evolution, stress response, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2023.1231099/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/28f98c58e9a641238dc0062ab9b44ea3

Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

Authors: Oliver Tills, John I. Spicer, Ziad Ibbini, Simon D. Rundle

Source: BMC Bioinformatics, Vol 22, Iss 1, Pp 1-11 (2021)

Subject Terms: Invertebrate development, Aquatic embryo, Energy proxy traits, High dimensional organismal phenotyping, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2105

Access URL: https://doaj.org/article/b58111c5a0784a7f91668fd192217fd0

Transcriptional frontloading contributes to cross‐tolerance between stressors

Authors: Michael Collins, Melody S. Clark, John I. Spicer, Manuela Truebano

Source: Evolutionary Applications, Vol 14, Iss 2, Pp 577-587 (2021)

Subject Terms: cross‐tolerance, environmental change, frontloading, multistressor, plasticity, Evolution, QH359-425

File Description: electronic resource

Relation: https://doaj.org/toc/1752-4571

Access URL: https://doaj.org/article/0894991a557146bab97622830d0fce62

Synthesis of Thresholds of Ocean Acidification Impacts on Decapods

Authors: Nina Bednaršek, Richard Ambrose, Piero Calosi, Richard K. Childers, Richard A. Feely, Steven Y. Litvin, W. Christopher Long, John I. Spicer, Jasna Štrus, Jennifer Taylor, Faycal Kessouri, Miranda Roethler, Martha Sutula, Stephen B. Weisberg

Source: Frontiers in Marine Science, Vol 8 (2021)

Subject Terms: ocean acidification, biological threshold, decapod, expert consensus, global synthesis, global change, Science, General. Including nature conservation, geographical distribution, QH1-199.5

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Relation: https://www.frontiersin.org/articles/10.3389/fmars.2021.651102/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/7bd679973f4541f7bc25fcd35abf52ae

Effect of Animal Stocking Density and Habitat Enrichment on Survival and Vitality of Wild Green Shore Crabs, Carcinus maenas, Maintained in the Laboratory

Authors: Charlotte H. Wilson, Russell C. Wyeth, John I. Spicer, Iain J. McGaw

Source: Animals, Vol 12, Iss 21, p 2970 (2022)

Subject Terms: animal welfare, crab, decapod, health, protocol, time, Veterinary medicine, SF600-1100, Zoology, QL1-991

File Description: electronic resource

Relation: https://www.mdpi.com/2076-2615/12/21/2970; https://doaj.org/toc/2076-2615

Access URL: https://doaj.org/article/71b73251bb7e419987239ae9bc05cfd8

Synthesis of Thresholds of Ocean Acidification Impacts on Echinoderms

Authors: Nina Bednaršek, Piero Calosi, Richard A. Feely, Richard Ambrose, Maria Byrne, Kit Yu Karen Chan, Sam Dupont, Jacqueline L. Padilla-Gamiño, John I. Spicer, Faycal Kessouri, Miranda Roethler, Martha Sutula, Stephen B. Weisberg

Source: Frontiers in Marine Science, Vol 8 (2021)

Subject Terms: ocean acidification, biological threshold, echinoderms, expert consensus, biological, quality, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2021.602601/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/87d5e7f54bb04a8caa078685d1b29cf1

Short-term acclimation in adults does not predict offspring acclimation potential to hypoxia

Authors: Manuela Truebano, Oliver Tills, Michael Collins, Charlotte Clarke, Emma Shipsides, Charlotte Wheatley, John I. Spicer

Source: Scientific Reports, Vol 8, Iss 1, Pp 1-9 (2018)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/eec1a85b124b441f8f8d426bdbe5933b

Quantifying susceptibility of marine invertebrate biocomposites to dissolution in reduced pH

Authors: Matthew Chadwick, Elizabeth M. Harper, Anaëlle Lemasson, John I. Spicer, Lloyd S. Peck

Source: Royal Society Open Science, Vol 6, Iss 6 (2019)

Subject Terms: ocean acidification, microstructure, bivalves, dissolution, crustaceans, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2054-5703

Access URL: https://doaj.org/article/9b1abea370054b2394c2024052aac7ed

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Environmental calcium modifies induced defences in snails.

Authors: Simon D. Rundle¹, John I. Spicer¹, Ross A. Coleman¹, Jo Vosper¹, Julie Soane¹

Source: Proceedings of the Royal Society B: Biological Sciences. Feb2004 Supplement 3, Vol. 271, pS67-S70. 4p.

Subject Terms: *ELASTICITY, *ENVIRONMENTAL sciences, *SNAILS, *GASTROPODA

Development of physiological regulatory systems: altering the timing of crucial events.

Authors: John I Spicer¹, Warren W Burggren²

Source: Zoology. May2003, Vol. 106 Issue 2, p91-99. 9p.

Subject Terms: *ANIMALS, *PHYSIOLOGY, *HETEROCHRONY (Biology)

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A high-throughput and open-source platform for embryo phenomics.

Authors: Oliver Tills, John I Spicer, Andrew Grimmer, Simone Marini, Vun Wen Jie, Ellen Tully, Simon D Rundle

Source: PLoS Biology, Vol 16, Iss 12, p e3000074 (2018)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1544-9173; https://doaj.org/toc/1545-7885

Access URL: https://doaj.org/article/f9d6eb5ea2694b1f978f9939aee7756f

Combining motion analysis and microfluidics--a novel approach for detecting whole-animal responses to test substances.

Authors: Tabitha S Rudin-Bitterli, Oliver Tills, John I Spicer, Phil F Culverhouse, Eric M Wielhouwer, Michael K Richardson, Simon D Rundle

Source: PLoS ONE, Vol 9, Iss 12, p e113235 (2014)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4251981?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/bc32a1d1f5814f37abb49ad6b2c30441