Integrative phenomics, metabolomics and genomics analysis provides new insights for deciphering the genetic basis of metabolism in polished rice

Authors: Hui Feng, Yufei Li, Guoxin Dai, Zhuang Yang, Jingyan Song, Bingjie Lu, Yuan Gao, Yongqi Chen, Jiawei Shi, Luis A. J. Mur, Lejun Yu, Jie Luo, Wanneng Yang

Source: Genome Biology, Vol 26, Iss 1, Pp 1-24 (2025)

Subject Terms: Hyperspectral imaging, Metabolism, Machine learning, Genome-wide association study, Polished rice, Biology (General), QH301-705.5, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1474-760X

Access URL: https://doaj.org/article/28cb1d9b60fd456582ef8229ce25deb1

Engineering aortic valves via transdifferentiating fibroblasts into valvular endothelial cells without using viruses or iPS cells

Authors: Peng Tang, Fuxiang Wei, Weihua Qiao, Xing Chen, Chenyang Ji, Wanzhi Yang, Xinyu Zhang, Sihan Chen, Yanyan Wu, Mingxing Jiang, Chenyu Ma, Weiqiang Shen, Qi Dong, Hong Cao, Minghui Xie, Ziwen Cai, Li Xu, Jiawei Shi, Nianguo Dong, Junwei Chen, Ning Wang

Source: Bioactive Materials, Vol 45, Iss , Pp 181-200 (2025)

Subject Terms: Transdifferentiation, Valvular endothelial cells, Tissue engineered aortic valves, Soluble factors, Substrate stiffness, Materials of engineering and construction. Mechanics of materials, TA401-492, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2452199X24005024; https://doaj.org/toc/2452-199X

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Single-cell multi-omics analysis identifies SPP1+ macrophages as key drivers of ferroptosis-mediated fibrosis in ligamentum flavum hypertrophy

Authors: Chengshuo Fei, Yanlin Chen, Ruiqian Tan, Xinxing Yang, Guanda Wu, Chenglong Li, Jiawei Shi, Shiyong Le, Wenjie Yang, Jiajia Xu, Liang Wang, Zhongmin Zhang

Source: Biomarker Research, Vol 13, Iss 1, Pp 1-28 (2025)

Subject Terms: Ligamentum flavum hypertrophy, Fibrosis, Ferroptosis, Single-cell RNA sequencing, Multi-omics analysis, Macrophages., Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: https://doaj.org/toc/2050-7771

Access URL: https://doaj.org/article/26787ddbf5a642b381bebd9b5513da20

Sustainable pest management using plant secondary metabolites regulated azadirachtin nano-assemblies

Authors: Xiaohong Zhang, Jianhua Xiao, Yuqi Huang, Yulu Liu, Gaohua Hu, Weiyao Yan, Guangyao Yan, Qing Guo, Jiawei Shi, Ruyue Han, Jianqiang Li, Gang Tang, Yongsong Cao

Source: Nature Communications, Vol 16, Iss 1, Pp 1-13 (2025)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/12f00326df944caaa3194d7f001477c9

Modeling snow accumulation in the bogie region caused by train slipstream based on sliding mesh and particle capture criteria

Authors: Yuzhe Ma, Jiye Zhang, Jiawei Shi, Lan Zhang, Yao Zhang

Source: Alexandria Engineering Journal, Vol 112, Iss , Pp 209-223 (2025)

Subject Terms: High-speed trains, Slipstream, Bogie, Sliding mesh, Particle capture criteria, Discrete phase model, Engineering (General). Civil engineering (General), TA1-2040

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1110016824014212; https://doaj.org/toc/1110-0168

Access URL: https://doaj.org/article/35fdf74337164fab909d580259b33d71

A contemporary simple risk score for prediction of severe acute kidney injury after heart transplantation

Authors: Shuangshuang Zhu, Weihua Qiao, Yixuan Wang, Ying Zhou, Yin Xu, Shijie Wang, Tian Xia, Guohua Wang, Si Chen, Jiawei Shi, Nianguo Dong

Source: ESC Heart Failure, Vol 12, Iss 2, Pp 1166-1175 (2025)

Subject Terms: heart transplantation, acute kidney injury, risk score, Diseases of the circulatory (Cardiovascular) system, RC666-701

File Description: electronic resource

Relation: https://doaj.org/toc/2055-5822

Access URL: https://doaj.org/article/27c4aa8ec51149b685755c55ba0e39b2

Prognostic significance of preoperative nutritional status for heart transplantation patients

Authors: Dingyi Yao, Shirui Qian, Li Xu, Lin Fan, Fei Li, Si Chen, Jiawei Shi, Nianguo Dong

Source: BMC Cardiovascular Disorders, Vol 24, Iss 1, Pp 1-12 (2024)

Subject Terms: Malnutrition, Heart transplantation, Prognosis, Infection, Diseases of the circulatory (Cardiovascular) system, RC666-701

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2261

Access URL: https://doaj.org/article/9cb6b27a3d1d45edaefcecd7183f7a21

Large-Scale Surface Modification of Decellularized Matrix with Erythrocyte Membrane for Promoting In Situ Regeneration of Heart Valve

Authors: Yuqi Liu, Pengning Fan, Yin Xu, Junwei Zhang, Li Xu, Jinsheng Li, Shijie Wang, Fei Li, Si Chen, Jiawei Shi, Weihua Qiao, Nianguo Dong

Source: Engineering, Vol 41, Iss , Pp 216-230 (2024)

Subject Terms: In situ tissue engineering heart valves, Red blood cell membrane, Endothelialization, Hemocompatibility, Immunomodulation, Engineering (General). Civil engineering (General), TA1-2040

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2095809924002558; https://doaj.org/toc/2095-8099

Access URL: https://doaj.org/article/b19095045a454b2a8e37329072e4dde4

A study on aerodynamic pass-by noise based on equivalent source method

Authors: Shumin Zhang, Jiawei Shi, Haoran Wang

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-12 (2024)

Subject Terms: Aerodynamic pass-by noise, Equivalent sound source method, High-speed train pantograph, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/76192e6856bd4e8e91179df00553aaed

Clonal GZMK+CD8+ T cells are identified as a hallmark of the pathogenesis of cGVHD-induced bronchiolitis obliterans syndrome after allogeneic hematopoietic stem cell transplantationResearch in context

Authors: Yang Gao, Ruixiang Liu, Jiawei Shi, Wei Shan, Hongyu Zhou, Zhi Chen, Xiaoyan Yue, Jie Zhang, Yi Luo, Wenjue Pan, Xiujie Zhao, Xun Zeng, Weiwei Yin, Haowen Xiao

Source: EBioMedicine, Vol 112, Iss , Pp 105535- (2025)

Subject Terms: Allogeneic hematopoietic stem cell transplantation, Chronic graft-versus-host disease, Bronchiolitis obliterans syndrome, Granzyme K, Bosutinib, Medicine, Medicine (General), R5-920

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352396424005711; https://doaj.org/toc/2352-3964

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Matrix Metalloproteinase‐Responsive Controlled Release of Self‐Assembly Nanoparticles Accelerates Heart Valve Regeneration In Situ by Orchestrating Immunomodulation

Authors: Xing Chen, Yunlong Wu, Peng Song, Liandong Feng, Ying Zhou, Jiawei Shi, Nianguo Dong, Weihua Qiao

Source: Advanced Science, Vol 12, Iss 2, Pp n/a-n/a (2025)

Subject Terms: hydrogel, macrophage polarization, microRNA, nanoparticles, tissue engineering heart valves, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2198-3844

Access URL: https://doaj.org/article/650ec3280e414bc587637ba14c9ddc60

Is Aggressive Surgery Always Necessary for Suspected Early‐Onset Surgical Site Infection after Lumbar Surgery? A 10‐Year Retrospective Analysis

Authors: Lin Zou, Pengxiao Sun, Weidong Chen, Jiawei Shi, Yujing Zhang, Jintao Zhong, Dongbin Qu, Minghui Zheng

Source: Orthopaedic Surgery, Vol 16, Iss 8, Pp 1884-1892 (2024)

Subject Terms: Early‐Onset Infection, Empirical Antibiotic Treatment, Posterior Lumbar Instrumented Surgery, Surgical Intervention, Suspected Surgical Site Infection, Orthopedic surgery, RD701-811

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Relation: https://doaj.org/toc/1757-7853; https://doaj.org/toc/1757-7861

Access URL: https://doaj.org/article/f3fc4fe9f03b41d0ab9c5f7aba48cf2c

Facile engineering of interactive double network hydrogels for heart valve regeneration

Authors: Jinsheng Li, Weihua Qiao, Yuqi Liu, Huiling Lei, Shuangshuang Wang, Yin Xu, Ying Zhou, Shuyu Wen, Zhuoran Yang, Wenyi Wan, Jiawei Shi, Nianguo Dong, Yuzhou Wu

Source: Nature Communications, Vol 15, Iss 1, Pp 1-20 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/ce1e069ebbc9480d9920a3883a5e80e9

Surface-neutralization engineered NiCo-LDH/phosphate hetero-sheets toward robust oxygen evolution reaction

Authors: Shunfa Zhou, Yuxuan Liu, Jing Li, Zhao Liu, Jiawei Shi, Liyuan Fan, Weiwei Cai

Source: Green Energy & Environment, Vol 9, Iss 7, Pp 1151-1158 (2024)

Subject Terms: Oxygen evolution reaction, Phosphate, Layered double hydroxide, Hetero-sheets, Stability, Renewable energy sources, TJ807-830, Ecology, QH540-549.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2468025722001819; https://doaj.org/toc/2468-0257

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Identification and validation of the diagnostic biomarker MFAP5 for CAVD with type 2 diabetes by bioinformatics analysis

Authors: Qiang Shen, Lin Fan, Chen Jiang, Dingyi Yao, Xingyu Qian, Fuqiang Tong, Zhengfeng Fan, Zongtao Liu, Nianguo Dong, Chao Zhang, Jiawei Shi

Source: Frontiers in Immunology, Vol 15 (2024)

Subject Terms: CAVD, diabetes, WGCNA, machine learning, immune infiltration, Immunologic diseases. Allergy, RC581-607

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fimmu.2024.1506663/full; https://doaj.org/toc/1664-3224

Access URL: https://doaj.org/article/7de2e1d4f1814cb4808170e5efd3bd5c

Prediction of postoperative stroke in patients experienced coronary artery bypass grafting surgery: a machine learning approach

Authors: Shiqi Chen, Kan Wang, Chen Wang, Zhengfeng Fan, Lizhao Yan, Yixuan Wang, Fayuan Liu, JiaWei Shi, QianNan Guo, NianGuo Dong

Source: Frontiers in Cardiovascular Medicine, Vol 11 (2024)

Subject Terms: coronary artery bypass grafting (CABG), machine learning (ML), preoperative clinical features, postoperative complications, stroke, random forest, Diseases of the circulatory (Cardiovascular) system, RC666-701

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Relation: https://www.frontiersin.org/articles/10.3389/fcvm.2024.1448740/full; https://doaj.org/toc/2297-055X

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Aortic valve replacement in a bicuspid aortic valve patient followed by reoperation for ascending aorta rupture: a case report

Authors: Yuehang Yang, Xinyi Liu, Junwei Liu, Jiawei Shi, Huadong Li

Source: Frontiers in Cardiovascular Medicine, Vol 11 (2024)

Subject Terms: ascending aortic dilatation, aortic rupture, cardiac reoperation, bicuspid aortic valve, aortic valve replacement, Diseases of the circulatory (Cardiovascular) system, RC666-701

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcvm.2024.1471686/full; https://doaj.org/toc/2297-055X

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Melt-electrowriting-enabled anisotropic scaffolds loaded with valve interstitial cells for heart valve tissue Engineering

Authors: Chao Xu, Kun Yang, Yin Xu, Xiangfu Meng, Ying Zhou, Yanping Xu, Xueyao Li, Weihua Qiao, Jiawei Shi, Donghui Zhang, Jianglin Wang, Weilin Xu, Hongjun Yang, Zhiqiang Luo, Nianguo Dong

Source: Journal of Nanobiotechnology, Vol 22, Iss 1, Pp 1-18 (2024)

Subject Terms: Heart valve tissue engineering, Melt electrowriting, Bioactive hydrogel, Extracellular matrix remodeling, Anisotropic scaffolds, Biotechnology, TP248.13-248.65, Medical technology, R855-855.5

File Description: electronic resource

Relation: https://doaj.org/toc/1477-3155

Access URL: https://doaj.org/article/b3bbff980f904f3d817ee735a2a3403d

Multidirectional myocardial function in bicuspid aortic valve stenosis patients: a three-dimensional speckle tracking analysis

Authors: Wenhui Deng, Yuting Tan, Jiawei Shi, Shukun He, Tianshu Liu, Wenqian Wu, Yuman Li, Yali Yang, Li Zhang, Mingxing Xie, Jing Wang

Source: Frontiers in Cardiovascular Medicine, Vol 11 (2024)

Subject Terms: bicuspid aortic valve, left ventricle, echocardiography, myocardial function, aortic stenosis, Diseases of the circulatory (Cardiovascular) system, RC666-701

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcvm.2024.1405754/full; https://doaj.org/toc/2297-055X

Access URL: https://doaj.org/article/8e62f75d978b481c8e249762d2327772

FOXO1 regulates RUNX2 ubiquitination through SMURF2 in calcific aortic valve disease

Authors: Chen Jiang, Dingyi Yao, Zongtao Liu, Yidan Zheng, Ming Chen, Wai Yen Yim, Qiang Zheng, Tailong Zhang, Lin Fan, Zhengfeng Fan, Bingchuan Geng, Rui Tian, Tingwen Zhou, Weihua Qiao, Jiawei Shi, Fei Li, Li Xu, Yuming Huang, Nianguo Dong

Source: Redox Biology, Vol 73, Iss , Pp 103215- (2024)

Subject Terms: Calcific aortic valve disease, Forkhead box O1, Phosphorylation, SMAD-Specific E3 ubiquitin ligase 2, Ubiquitination, Medicine (General), R5-920, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2213231724001939; https://doaj.org/toc/2213-2317

Access URL: https://doaj.org/article/d948afff4a364c9288fdaa66452103c4