Genome Sequencing and Assembly of Enterotoxigenic Escherichia coli E9034A: Role of LngA, CstH, and FliC in Intestinal Cell Colonization and the Release of the Proinflammatory Cytokine IL-8

Authors: Ricardo Rodríguez-Martínez, Sara A. Ochoa, Ricardo Valle-Rios, Gustavo A. Jaimes-Ortega, Rigoberto Hernández-Castro, Jetsi Mancilla-Rojano, Graciela Castro-Escarpulli, Catalina López-Saucedo, Teresa Estrada-García, Ariadnna Cruz-Córdova, Juan Xicohtencatl-Cortes

Source: Microorganisms, Vol 13, Iss 2, p 374 (2025)

Subject Terms: enterotoxigenic Escherichia coli, colonization factor, cytokine, toxin, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.mdpi.com/2076-2607/13/2/374; https://doaj.org/toc/2076-2607

Access URL: https://doaj.org/article/01f04f2031a540a29c9f5476eec494f9

From Traditional Typing to Genomic Precision: Whole-Genome Sequencing of Listeria monocytogenes Isolated from Refrigerated Foods in Chile

Authors: Julio Parra-Flores, Beatriz Daza-Prieto, Pamela Chavarria, Miriam Troncoso, Anna Stöger, Guillermo Figueroa, Jetsi Mancilla-Rojano, Ariadnna Cruz-Córdova, Aleksandra Martinovic, Werner Ruppitsch

Source: Foods, Vol 14, Iss 2, p 290 (2025)

Subject Terms: Listeria monocytogenes, whole-genome sequencing, antimicrobial resistance genes, virulence genes, Chemical technology, TP1-1185

File Description: electronic resource

Relation: https://www.mdpi.com/2304-8158/14/2/290; https://doaj.org/toc/2304-8158

Access URL: https://doaj.org/article/20e404bd742441658545cbbf579def54

A bioinformatic approach to identify confirmed and probable CRISPR–Cas systems in the Acinetobacter calcoaceticus–Acinetobacter baumannii complex genomes

Authors: Jetsi Mancilla-Rojano, Víctor Flores, Miguel A. Cevallos, Sara A. Ochoa, Julio Parra-Flores, José Arellano-Galindo, Juan Xicohtencatl-Cortes, Ariadnna Cruz-Córdova

Source: Frontiers in Microbiology, Vol 15 (2024)

Subject Terms: Acinetobacter baumannii, Acinetobacter calcoaceticus–Acinetobacter baumannii complex, cas genes, CRISPR systems, prophages, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2024.1335997/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/4d05542394c944658f0c54dd4a4667fb

Genomic Characterization of Cronobacter spp. and Salmonella spp. Strains Isolated From Powdered Infant Formula in Chile

Authors: Julio Parra-Flores, Ondřej Holý, Sergio Acuña, Sarah Lepuschitz, Ariane Pietzka, Alejandra Contreras-Fernández, Pamela Chavarría-Sepulveda, Ariadnna Cruz-Córdova, Juan Xicohtencatl-Cortes, Jetsi Mancilla-Rojano, Alejandro Castillo, Werner Ruppitsch, Stephen Forsythe

Source: Frontiers in Microbiology, Vol 13 (2022)

Subject Terms: Cronobacter sakazakii, Cronobacter malonaticus, Salmonella Typhimurium, powdered infant formula, virulence, resistance genes, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.884721/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/b34da6fa4e354e6eb1ece2d3460f3898

Virulence and Antibiotic Resistance Genes in Listeria monocytogenes Strains Isolated From Ready-to-Eat Foods in Chile

Authors: Julio Parra-Flores, Ondrej Holý, Fernanda Bustamante, Sarah Lepuschitz, Ariane Pietzka, Alejandra Contreras-Fernández, Claudia Castillo, Catalina Ovalle, María Paula Alarcón-Lavín, Ariadnna Cruz-Córdova, Juan Xicohtencatl-Cortes, Jetsi Mancilla-Rojano, Miriam Troncoso, Guillermo Figueroa, Werner Ruppitsch

Source: Frontiers in Microbiology, Vol 12 (2022)

Subject Terms: Listeria monocytogenes, ready-to-eat foods, virulence, resistance genes, whole-genome sequencing, CRISPR-Cas, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.796040/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/1a218a020d1b4edea638bbccb83e10c9

Profiling the Virulence and Antibiotic Resistance Genes of Cronobacter sakazakii Strains Isolated From Powdered and Dairy Formulas by Whole-Genome Sequencing

Authors: Julio Parra-Flores, Ondrej Holý, Francisca Riffo, Sarah Lepuschitz, Eduard Maury-Sintjago, Alejandra Rodríguez-Fernández, Ariadnna Cruz-Córdova, Juan Xicohtencatl-Cortes, Jetsi Mancilla-Rojano, Miriam Troncoso, Guillermo Figueroa, Werner Ruppitsch, Stephen Forsythe

Source: Frontiers in Microbiology, Vol 12 (2021)

Subject Terms: Cronobacter sakazakii, powdered formula, virulence, antibiotic resistance genes, CRISPR-cas, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.694922/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/f2326c740f544a6880687642e12cbfc7

Control of Methicillin-Resistant Staphylococcus aureus Strains Associated With a Hospital Outbreak Involving Contamination From Anesthesia Equipment Using UV-C

Authors: Sara A. Ochoa, Ariadnna Cruz-Córdova, Jetsi Mancilla-Rojano, Gerardo Escalona-Venegas, Veronica Esteban-Kenel, Isabel Franco-Hernández, Israel Parra-Ortega, José Arellano-Galindo, Rigoberto Hernández-Castro, Citlalli F. Perez-López, Daniela De la Rosa-Zamboni, Juan Xicohtencatl-Cortes

Source: Frontiers in Microbiology, Vol 11 (2020)

Subject Terms: MRSA, multidrug resistance, PFGE, MLST, genetic diversity, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2020.600093/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/6488137f298241f6ac517bc016e8aa0b

Molecular Epidemiology of Acinetobacter calcoaceticus-Acinetobacter baumannii Complex Isolated From Children at the Hospital Infantil de México Federico Gómez

Authors: Jetsi Mancilla-Rojano, Sara A. Ochoa, Juan Pablo Reyes-Grajeda, Víctor Flores, Oscar Medina-Contreras, Karina Espinosa-Mazariego, Israel Parra-Ortega, Daniela De La Rosa-Zamboni, María del Carmen Castellanos-Cruz, José Arellano-Galindo, Miguel A. Cevallos, Rigoberto Hernández-Castro, Juan Xicohtencatl-Cortes, Ariadnna Cruz-Córdova

Source: Frontiers in Microbiology, Vol 11 (2020)

Subject Terms: Acinetobacter baumannii, Acinetobacter calcoaceticus-Acinetobacter baumannii complex, intensive care unit, resistance, molecular typing, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fmicb.2020.576673/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/77d8c11e66e64ccab89da92ebbd1353e

Molecular Epidemiology, Antibiotic Resistance, and Virulence Traits of Stenotrophomonas maltophilia Strains Associated With an Outbreak in a Mexican Tertiary Care Hospital

Authors: Ariadnna Cruz-Córdova, Jetsi Mancilla-Rojano, Víctor M. Luna-Pineda, Gerardo Escalona-Venegas, Vicenta Cázares-Domínguez, Christopher Ormsby, Isabel Franco-Hernández, Sergio Zavala-Vega, Mónica Andrés Hernández, Marisol Medina-Pelcastre, Israel Parra-Ortega, Daniela De la Rosa-Zamboni, Sara A. Ochoa, Juan Xicohtencatl-Cortes

Source: Frontiers in Cellular and Infection Microbiology, Vol 10 (2020)

Subject Terms: outbreak, S. maltophilia, molecular typing, virulence, resistance, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fcimb.2020.00050/full; https://doaj.org/toc/2235-2988

Access URL: https://doaj.org/article/10338dc6d8ee4e2894130aeb7837c506

Molecular Characterization of Cronobacter sakazakii Strains Isolated from Powdered Milk

Authors: Ondrej Holý, Julio Parra-Flores, Sarah Lepuschitz, María Paula Alarcón-Lavín, Ariadnna Cruz-Córdova, Juan Xicohtencatl-Cortes, Jetsi Mancilla-Rojano, Werner Ruppitsch, Stephen Forsythe

Source: Foods, Vol 10, Iss 1, p 20 (2020)

Subject Terms: Cronobacter sakazakii, whole-genome sequencing, powdered milk, virulence, antibiotic resistance genes, CRISPR-Cas, Chemical technology, TP1-1185

File Description: electronic resource

Relation: https://www.mdpi.com/2304-8158/10/1/20; https://doaj.org/toc/2304-8158

Access URL: https://doaj.org/article/8d1decd91e7c40b5a612bf1c83111354

Whole-Genome Sequences of Five Acinetobacter baumannii Strains From a Child With Leukemia M2

Authors: Jetsi Mancilla-Rojano, Semiramis Castro-Jaimes, Sara A. Ochoa, Miriam Bobadilla del Valle, Victor M. Luna-Pineda, Patricia Bustos, Almudena Laris-González, José Arellano-Galindo, Israel Parra-Ortega, Rigoberto Hernández-Castro, Miguel A. Cevallos, Juan Xicohtencatl-Cortes, Ariadnna Cruz-Córdova

Source: Frontiers in Microbiology, Vol 10 (2019)

Subject Terms: Acinetobacter baumannii, resistance, molecular typing, adherence, invasion, virulence factors, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fmicb.2019.00132/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/7ae6d5091dd04711aae6fa3ffc08ff22