LGR5 expressing skin fibroblasts define a major cellular hub perturbed in scleroderma

Authors: Gur, Chamutal, Wang, Shuang-Yin, Sheban, Fadi, Zada, Mor, Li, Baoguo, Kharouf, Fadi, Peleg, Hagit, Aamar, Suhail, Yalin, Adam, Kirschenbaum, Daniel, Braun-Moscovici, Yolanda, Jaitin, Diego Adhemar, meir-salame, Tomer, Hagai, Efrat, Kragesteen, Bjørt K., Avni, Batia, Grisariu, Sigal, Bornstein, Chamutal, Shlomi-Loubaton, Shir, David, Eyal, Shreberk-Hassidim, Rony, Molho-Pessach, Vered, Amar, Dalit, Tzur, Tomer, Kuint, Rottem, Gross, Moshe, Barboy, Oren, Moshe, Adi, Fellus-Alyagor, Liat, Hirsch, Dana, Addadi, Yoseph, Erenfeld, Shlomit, Biton, Moshe, Tzemach, Tehila, Elazary, Anat, Naparstek, Yaakov, Tzemach, Reut, Weiner, Assaf, Giladi, Amir, Balbir-Gurman, Alexandra, Amit, Ido

Source: In Cell 14 April 2022 185(8):1373-1388

Coupled scRNA-Seq and Intracellular Protein Activity Reveal an Immunosuppressive Role of TREM2 in Cancer

Authors: Katzenelenbogen, Yonatan, Sheban, Fadi, Yalin, Adam, Yofe, Ido, Svetlichnyy, Dmitry, Jaitin, Diego Adhemar, Bornstein, Chamutal, Moshe, Adi, Keren-Shaul, Hadas, Cohen, Merav, Wang, Shuang-Yin, Li, Baoguo, David, Eyal, Salame, Tomer-Meir, Weiner, Assaf, Amit, Ido

Source: In Cell 20 August 2020 182(4):872-885

Lipid-Associated Macrophages Control Metabolic Homeostasis in a Trem2-Dependent Manner

Authors: Jaitin, Diego Adhemar, Adlung, Lorenz, Thaiss, Christoph A., Weiner, Assaf, Li, Baoguo, Descamps, Hélène, Lundgren, Patrick, Bleriot, Camille, Liu, Zhaoyuan, Deczkowska, Aleksandra, Keren-Shaul, Hadas, David, Eyal, Zmora, Niv, Eldar, Shai Meron, Lubezky, Nir, Shibolet, Oren, Hill, David A., Lazar, Mitchell A., Colonna, Marco, Ginhoux, Florent, Shapiro, Hagit, Elinav, Eran, Amit, Ido

Source: In Cell 25 July 2019 178(3):686-698

Deterministic Somatic Cell Reprogramming Involves Continuous Transcriptional Changes Governed by Myc and Epigenetic-Driven Modules

Authors: Zviran, Asaf, Mor, Nofar, Rais, Yoach, Gingold, Hila, Peles, Shani, Chomsky, Elad, Viukov, Sergey, Buenrostro, Jason D., Scognamiglio, Roberta, Weinberger, Leehee, Manor, Yair S., Krupalnik, Vladislav, Zerbib, Mirie, Hezroni, Hadas, Jaitin, Diego Adhemar, Larastiaso, David, Gilad, Shlomit, Benjamin, Sima, Gafni, Ohad, Mousa, Awni, Ayyash, Muneef, Sheban, Daoud, Bayerl, Jonathan, Aguilera-Castrejon, Alejandro, Massarwa, Rada, Maza, Itay, Hanna, Suhair, Stelzer, Yonatan, Ulitsky, Igor, Greenleaf, William J., Tanay, Amos, Trumpp, Andreas, Amit, Ido, Pilpel, Yitzhak, Novershtern, Noa, Hanna, Jacob H.

Source: In Cell Stem Cell 7 February 2019 24(2):328-341

Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq

Authors: Jaitin, Diego Adhemar, Weiner, Assaf, Yofe, Ido, Lara-Astiaso, David, Keren-Shaul, Hadas, David, Eyal, Salame, Tomer Meir, Tanay, Amos, van Oudenaarden, Alexander, Amit, Ido

Source: In Cell 15 December 2016 167(7):1883-1896

Extracellular Matrix Proteolysis by MT1-MMP Contributes to Influenza-Related Tissue Damage and Mortality

Authors: Talmi-Frank, Dalit, Altboum, Zeev, Solomonov, Inna, Udi, Yael, Jaitin, Diego Adhemar, Klepfish, Mordehay, David, Eyal, Zhuravlev, Alina, Keren-Shaul, Hadas, Winter, Deborah R., Gat-Viks, Irit, Mandelboim, Michal, Ziv, Tamar, Amit, Ido, Sagi, Irit

Source: In Cell Host & Microbe 12 October 2016 20(4):458-470

Distinct biological events generated by ECM proteolysis by two homologous collagenases

Authors: Solomonov, Inna, Zehorai, Eldar, Talmi-Frank, Dalit, Wolf, Sharon G., Shainskaya, Alla, Zhuravlev, Alina, Kartvelishvily, Elena, Visse, Robert, Levin, Yishai, Kampf, Nir, Jaitin, Diego Adhemar, David, Eyal, Amit, Ido, Nagase, Hideaki, Sagi, Irit

Source: Proceedings of the National Academy of Sciences of the United States of America, 2016 Sep . 113(39), 10884-10889.

Access URL: https://www.jstor.org/stable/26471851

Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors

Authors: Paul, Franziska, Arkin, Ya’ara, Giladi, Amir, Jaitin, Diego Adhemar, Kenigsberg, Ephraim, Keren-Shaul, Hadas, Winter, Deborah, Lara-Astiaso, David, Gury, Meital, Weiner, Assaf, David, Eyal, Cohen, Nadav, Lauridsen, Felicia Kathrine Bratt, Haas, Simon, Schlitzer, Andreas, Mildner, Alexander, Ginhoux, Florent, Jung, Steffen, Trumpp, Andreas, Porse, Bo Torben, Tanay, Amos, Amit, Ido

Source: In Cell 17 December 2015 163(7):1663-1677

Each cell counts: Hematopoiesis and immunity research in the era of single cell genomics

Authors: Jaitin, Diego Adhemar, Keren-Shaul, Hadas, Elefant, Naama, Amit, Ido

Source: In Seminars in Immunology February 2015 27(1):67-71

m 6 A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation

Authors: Geula, Shay, Moshitch-Moshkovitz, Sharon, Dominissini, Dan, Mansour, Abed AlFatah, Kol, Nitzan, Salmon-Divon, Mali, Hershkovitz, Vera, Peer, Eyal, Mor, Nofar, Manor, Yair S., Ben-Haim, Moshe Shay, Eyal, Eran, Yunger, Sharon, Pinto, Yishay, Jaitin, Diego Adhemar, Viukov, Sergey, Rais, Yoach, Krupalnik, Vladislav, Chomsky, Elad, Zerbib, Mirie, Maza, Itay, Rechavi, Yoav, Massarwa, Rada, Hanna, Suhair, Amit, Ido, Levanon, Erez Y., Amariglio, Ninette, Stern-Ginossar, Noam, Novershtern, Noa, Rechavi, Gideon, Hanna, Jacob H.

Source: Science, 2015 Feb . 347(6225), 1002-1006.

Access URL: http://www.jstor.org/stable/24746225

Chromatin state dynamics during blood formation

Authors: Lara-Astiaso, David, Weiner, Assaf, Lorenzo-Vivas, Erika, Zaretsky, Irina, Jaitin, Diego Adhemar, David, Eyal, Keren-Shaul, Hadas, Mildner, Alexander, Winter, Deborah, Jung, Steffen, Friedman, Nir, Amit, Ido

Source: Science, 2014 Aug . 345(6199), 943-949.

Access URL: https://www.jstor.org/stable/24917249

Massively Parallel Single-Cell RNA-Seq for Marker-Free Decomposition of Tissues into Cell Types

Authors: Jaitin, Diego Adhemar, Kenigsberg, Ephraim, Keren-Shaul, Hadas, Elefant, Naama, Paul, Franziska, Zaretsky, Irina, Mildner, Alexander, Cohen, Nadav, Jung, Steffen, Tanay, Amos, Amit, Ido

Source: Science, 2014 Feb . 343(6172), 776-779.

Access URL: http://www.jstor.org/stable/24743019

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XCR1+type 1 conventional dendritic cells drive liver pathology in non-alcoholic steatohepatitis

Authors: Deczkowska, Aleksandra, David, Eyal, Ramadori, Pierluigi, Pfister, Dominik, Safran, Michael, At the, Baoguo, Giladi, Amir, Jaitin, Diego Adhemar, Barboy, Oren, Cohen, Merav, Yofe, Ido, Gur, Chamutal, Shlomi-Loubaton, Shir, Henri, Sandrine, Suhail, Yousuf, Qiu, Mengjie, Kam, Shing, Hermon, Hila, Lahat, Eylon, Ben Yakov, Gil, Cohen-Ezra, Oranit, Davidov, Yana, Likhter, Mariya, Goitein, David, Roth, Susanne, Weber, Achim, Malissen, Bernard, Weiner, Assaf, Ben-Ari, Ziv, Heikenwälder, Mathias, Elinav, Eran, Amit, Ido

Source: Nature Medicine; 20210101, Issue: Preprints p1-12, 12p

MARS-seq2.0: an experimental and analytical pipeline for indexed sorting combined with single-cell RNA sequencing.

Authors: Keren-Shaul, Hadas, Kenigsberg, Ephraim, Jaitin, Diego Adhemar, David, Eyal, Paul, Franziska, Tanay, Amos, Amit, Ido

Source: Nature Protocols; Jun2019, Vol. 14 Issue 6, p1841-1862, 22p

Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors

Authors: Paul, Franziska, Arkin, Ya'ara, Giladi, Amir, Jaitin, Diego Adhemar, Kenigsberg, Ephraim, Keren-Shaul, Hadas, Winter, Deborah, Lara-Astiaso, David, Gury, Meital, Weiner, Assaf, David, Eyal, Cohen, Nadav, Lauridsen, Felicia Kathrine Bratt, Haas, Simon, Schlitzer, Andreas, Mildner, Alexander, Ginhoux, Florent, Jung, Steffen, Trumpp, Andreas, Porse, Bo Torben, Tanay, Amos, Amit, Ido

Source: Cell. 164(1/2):325-325

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100066105609.0x000001&indx=1&recIds=ETOCvdc_100066105609.0x000001

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The central nervous system microenvironment imprints microglial inability to switch from pro- to anti-inflammatory phenotype

Authors: Matcovitch, Orit, Cohen, Merav, David, Eyal, Barnett-itzhaki, Zohar, Keren-shaul, Hadas, Blecher-gonen, Ronnie, Jaitin, Diego Adhemar, Sica, Antonio, Amit, Ido, Schwartz, Michal

Source: In Journal of Neuroimmunology 15 October 2014 275(1-2):162-162

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