Interplay between pioneer transcription factors and epigenetic modifiers in cell reprogramming

Authors: Mirizio, Gerardo ^{a, b, 1}, Sampson, Samuel ^{a, b, 1}, Iwafuchi, Makiko ^{a, b, ⁎}

Source: In Regenerative Therapy March 2025 28:246-252

Pioneer and PRDM transcription factors coordinate bivalent epigenetic states to safeguard cell fate

Authors: Matsui, Satoshi, Granitto, Marissa, Buckley, Morgan, Ludwig, Katie, Koigi, Sandra, Shiley, Joseph, Zacharias, William J., Mayhew, Christopher N., Lim, Hee-Woong, Iwafuchi, Makiko

Source: In Molecular Cell 1 February 2024 84(3):476-489

SOX transcription factors direct TCF-independent WNT/β-catenin responsive transcription to govern cell fate in human pluripotent stem cells

Authors: Mukherjee, Shreyasi, Luedeke, David M., McCoy, Leslie, Iwafuchi, Makiko, Zorn, Aaron M.

Source: In Cell Reports 23 August 2022 40(8)

Pioneer and PRDM transcription factors coordinate bivalent epigenetic states to safeguard cell fate

Authors: Matsui, Satoshi, Granitto, Marissa, Buckley, Morgan, Ludwig, Katie, Koigi, Sandra, Shiley, Joseph, Zacharias, William J., Mayhew, Christopher N., Lim, Hee-Woong ^∗, Iwafuchi, Makiko ^∗∗

Source: In Molecular Cell 20 March 2025 85(6):1247-1248

Protocol for establishing inducible CRISPRd system for blocking transcription factor-binding sites in human pluripotent stem cells

Authors: Matsui, Satoshi ^{1, 3, 4, ∗}, Shiley, Joseph R. ^{1, 3}, Buckley, Morgan ^{1, 3}, Lim, Hee-Woong ², Hu, Yueh-Chiang ¹, Mayhew, Christopher N. ^{1, 4, ∗∗}, Iwafuchi, Makiko ^{1, 4, 5, ∗∗∗}

Source: In STAR Protocols 20 September 2024 5(3)

Protocol for establishing inducible CRISPR interference system for multiple-gene silencing in human pluripotent stem cells

Authors: Matsui, Satoshi ^{1, 2}, Shiley, Joseph R. ^{1, 2}, Granitto, Marissa ^{1, 2}, Ludwig, Katie ¹, Buckley, Morgan ¹, Koigi, Sandra ¹, Mirizio, Gerardo ¹, Hu, Yueh-Chiang ¹, Mayhew, Christopher N. ^{1, 3, ∗}, Iwafuchi, Makiko ^{1, 3, 4, ∗∗}

Source: In STAR Protocols 20 September 2024 5(3)

In vitro effects of bisphenol A on developing hypothalamic neurons

Authors: Iwakura, Takashi, Iwafuchi, Makiko, Muraoka, Daisuke, Yokosuka, Makoto, Shiga, Takashi, Watanabe, Chiho, Ohtani-Kaneko, Ritsuko

Source: In Toxicology 2010 272(1):52-58

Effects of estrogen on synapsin I distribution in developing hypothalamic neurons

Authors: Ohtani-Kaneko, Ritsuko, Iwafuchi, Makiko, Iwakura, Takashi, Muraoka, Daisuke, Yokosuka, Makoto, Shiga, Takashi, Watanabe, Chiho

Source: In Neuroscience Research 2010 66(2):180-188

Protocol for establishing inducible CRISPR interference system for multiple-gene silencing in human pluripotent stem cells

Authors: Matsui, Satoshi, Shiley, Joseph R., Granitto, Marissa, Ludwig, Katie, Buckley, Morgan, Koigi, Sandra, Mirizio, Gerardo, Hu, Yueh-Chiang, Mayhew, Christopher N., Iwafuchi, Makiko

Source: STAR Protocols; June 2025, Vol. 6 Issue: 2

Gene network transitions in embryos depend upon interactions between a pioneer transcription factor and core histones

Authors: Iwafuchi, Makiko, Cuesta, Isabel, Donahue, Greg, Takenaka, Naomi, Osipovich, Anna B., Magnuson, Mark A., Roder, Heinrich, Seeholzer, Steven H., Santisteban, Pilar, Zaret, Kenneth S.

Source: Nature Genetics; April 2020, Vol. 52 Issue: 4 p418-427, 10p

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Effect of bisphenol A on developing hypothalamic neurons

Authors: Iwakura, Takashi, Iwafuchi, Makiko, Muraoka, Daisuke, Yokosuka, Makoto, Shiga, Takashi, Watanabe, Chiho, Ohtani-Kaneko, Ritsuko

Source: In Neuroscience Research 2010 68 Supplement 1:e281-e281

A transition in Sox2 gene regulation distinguishes the epiblastic and anterior neural plate states

Authors: Iwafuchi, Makiko, Takemoto, Tatsuya, Uchikawa, Masanori, Kamachi, Yusuke, Kondoh, Hisato

Source: In Developmental Biology 15 July 2008 319(2):593-593