EasyMetagenome: A user‐friendly and flexible pipeline for shotgun metagenomic analysis in microbiome research

Authors: Defeng Bai, Tong Chen, Jiani Xun, Chuang Ma, Hao Luo, Haifei Yang, Chen Cao, Xiaofeng Cao, Jianzhou Cui, Yuan‐Ping Deng, Zhaochao Deng, Wenxin Dong, Wenxue Dong, Juan Du, Qunkai Fang, Wei Fang, Yue Fang, Fangtian Fu, Min Fu, Yi‐Tian Fu, He Gao, Jingping Ge, Qinglong Gong, Lunda Gu, Peng Guo, Yuhao Guo, Tang Hai, Hao Liu, Jieqiang He, Zi‐Yang He, Huiyu Hou, Can Huang, Shuai Ji, ChangHai Jiang, Gui‐Lai Jiang, Lingjuan Jiang, Ling N. Jin, Yuhe Kan, Da Kang, Jin Kou, Ka‐Lung Lam, Changchao Li, Chong Li, Fuyi Li, Liwei Li, Miao Li, Xin Li, Ye Li, Zheng‐Tao Li, Jing Liang, Yongxin Lin, Changzhen Liu, Danni Liu, Fengqin Liu, Jia Liu, Tianrui Liu, Tingting Liu, Xinyuan Liu, Yaqun Liu, Bangyan Liu, Minghao Liu, Wenbo Lou, Yaning Luan, Yuanyuan Luo, Hujie Lv, Tengfei Ma, Zongjiong Mai, Jiayuan Mo, Dongze Niu, Zhuo Pan, Heyuan Qi, Zhanyao Shi, Chunjiao Song, Fuxiang Sun, Yan Sun, Sihui Tian, Xiulin Wan, Guoliang Wang, Hongyang Wang, Hongyu Wang, Huanhuan Wang, Jing Wang, Jun Wang, Kang Wang, Leli Wang, Shao‐kun Wang, Xinlong Wang, Yao Wang, Zufei Xiao, Huichun Xing, Yifan Xu, Shu‐yan Yan, Li Yang, Song Yang, Yuanming Yang, Xiaofang Yao, Salsabeel Yousuf, Hao Yu, Yu Lei, Zhengrong Yuan, Meiyin Zeng, Chunfang Zhang, Chunge Zhang, Huimin Zhang, Jing Zhang, Na Zhang, Tianyuan Zhang, Yi‐Bo Zhang, Yupeng Zhang, Zheng Zhang, Mingda Zhou, Yuanping Zhou, Chengshuai Zhu, Lin Zhu, Yue Zhu, Zhihao Zhu, Hongqin Zou, Anna Zuo, Wenxuan Dong, Tao Wen, Shifu Chen, Guoliang Li, Yunyun Gao, Yong‐Xin Liu

Source: iMeta, Vol 4, Iss 1, Pp n/a-n/a (2025)

Subject Terms: metagenome, microbiome, microbiota, pipeline, visualization, Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: https://doaj.org/toc/2770-596X

Access URL: https://doaj.org/article/9e02ebd1b25b4e5fb372b6e50eee325f

Response of maize yield and nitrogen recovery efficiency to nitrogen fertilizer application in field with various soil fertility

Authors: Hongqin Zou, Dejin Li, Keyu Ren, Lisheng Liu, Wenju Zhang, Yinghua Duan, Changai Lu

Source: Frontiers in Plant Science, Vol 15 (2024)

Subject Terms: red soil, nitrogen fertilizer application rate, nitrogen use efficiency, soil microbial biomass carbon, soil microbial biomass nitrogen, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpls.2024.1349180/full; https://doaj.org/toc/1664-462X

Access URL: https://doaj.org/article/e32f25bafae443adb141f2da7c47f463

Effect of replacing synthetic nitrogen fertilizer with animal manure on grain yield and nitrogen use efficiency in China: a meta‐analysis

Authors: Keyu Ren, Yue Sun, Hongqin Zou, Dejin Li, Changai Lu, Yinghua Duan, Wenju Zhang

Source: Frontiers in Plant Science, Vol 14 (2023)

Subject Terms: manure fertilizer, synthetic N fertilizer, crop yield, nitrogen use efficiency, meta-analysis, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpls.2023.1153235/full; https://doaj.org/toc/1664-462X

Access URL: https://doaj.org/article/7ab30913888c4f699b53f421c7c7ba46