SNP-based and haplotype-based genome-wide association on drug dependence in Han Chinese

Authors: Hanli Xu, Yulin Kang, Tingming Liang, Sifen Lu, Xiaolin Xia, Zuhong Lu, Lingming Hu, Li Guo, Lishu Zhang, Jiaqiang Huang, Lin Ye, Peiye Jiang, Yi Liu, Li Xinyi, Jin Zhai, Zi Wang, Yangyang Liu

Source: BMC Genomics, Vol 25, Iss 1, Pp 1-12 (2024)

Subject Terms: Drug addiction, Genome-wide association, Single nucleotide polymorphism, Haplotype, Han Chinese, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/74d6aa5e916d4135ba677711c6b80f5d

An object detection method for bayberry trees based on an improved YOLO algorithm

Authors: Youliang Chen, Hanli Xu, Xiangjun Zhang, Peng Gao, Zhigang Xu, Xiaobin Huang

Source: International Journal of Digital Earth, Vol 16, Iss 1, Pp 781-805 (2023)

Subject Terms: object detection, yolo-v4, deep learning, bayberry trees, plant number statistics, Mathematical geography. Cartography, GA1-1776

File Description: electronic resource

Relation: https://doaj.org/toc/1753-8947; https://doaj.org/toc/1753-8955

Access URL: https://doaj.org/article/374bc0619814476ba8dc2a10071f05a9

UHRF1/DNMT1–MZF1 axis-modulated intragenic site-specific CpGI methylation confers divergent expression and opposing functions of PRSS3 isoforms in lung cancer

Authors: Shuye Lin, Hanli Xu, Lin Qin, Mengdi Pang, Ziyu Wang, Meng Gu, Lishu Zhang, Cong Zhao, Xuefeng Hao, Zhiyun Zhang, Weimin Ding, Jianke Ren, Jiaqiang Huang

Source: Acta Pharmaceutica Sinica B, Vol 13, Iss 5, Pp 2086-2106 (2023)

Subject Terms: Lung cancer, Intratumor heterogeneity, Splice variants, Intragenic CpG methylation, Protease serine 3, Myeloid zinc finger 1, Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2211383523000576; https://doaj.org/toc/2211-3835

Access URL: https://doaj.org/article/5faaba36d4ed4623a59063daac58d8c6

The regulatory metabolic networks of the Brassica campestris L. hairy roots in response to cadmium stress revealed from proteome studies combined with a transcriptome analysis

Authors: Yaping Sun, Xiaoyu Liu, Wenxuan Li, Xinning Wang, Xiaoyue Zhong, Yifan Gao, Hanli Xu, Honggang Hu, Lishu Zhang, Xiyu Cheng, Qiong Yan

Source: Ecotoxicology and Environmental Safety, Vol 263, Iss , Pp 115214- (2023)

Subject Terms: Brassica campestris L., Cadmium stress response, Transcriptome and proteome analysis, Phenylalanine, Glutathione and phytochelatins metabolism, Plant hormone signal transduction, Environmental pollution, TD172-193.5, Environmental sciences, GE1-350

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S0147651323007182; https://doaj.org/toc/0147-6513

Access URL: https://doaj.org/article/c2aa245b66544a17b3b65ea6bd957973

Optical Genome Mapping Reveals the Landscape of Structural Variations and Their Clinical Significance in HBOC-Related Breast Cancer

Authors: Yanan Cheng, Li Dong, Dechao Bu, Lei Han, Yi Zhao, Juntian Liu, Xiaojing Guo, Hanli Xu, Jinpu Yu

Source: Frontiers in Bioscience-Landmark, Vol 29, Iss 1, p 2 (2024)

Subject Terms: hboc, breast cancer, optical genome mapping, structural variation, brca1/2, chromothripsis, Biochemistry, QD415-436, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.imrpress.com/journal/FBL/29/1/10.31083/j.fbl2901002; https://doaj.org/toc/2768-6701

Access URL: https://doaj.org/article/60da283f3e8348bb81464d63bb4727fd

Cancer Stem Cell Biomarkers in the Nervous System

Authors: Xinyi Li, Jiaqiang Huang, Yulin Kang, Xiyu Cheng, Qiong Yan, Lishu Zhang, Jingpu Fan, Hanli Xu

Source: Frontiers in Bioscience-Landmark, Vol 28, Iss 12, p 362 (2023)

Subject Terms: cancer stem cell, neurological tumors, biomarker, nervous system, Biochemistry, QD415-436, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.imrpress.com/journal/FBL/28/12/10.31083/j.fbl2812362; https://doaj.org/toc/2768-6701

Access URL: https://doaj.org/article/049a12d48c6644b1ac8f2eb518e210dc

Metagenomic study of the gut microbiota associated with cow milk consumption in Chinese peri-/postmenopausal women

Authors: Bo Tian, Jia-Heng Yao, Xu Lin, Wan-Qiang Lv, Lin-Dong Jiang, Zhuo-Qi Wang, Jie Shen, Hong-Mei Xiao, Hanli Xu, Lu-Lu Xu, Xiyu Cheng, Hui Shen, Chuan Qiu, Zhe Luo, Lan-Juan Zhao, Qiong Yan, Hong-Wen Deng, Li-Shu Zhang

Source: Frontiers in Microbiology, Vol 13 (2022)

Subject Terms: cow milk consumption, metagenomic, gut microbiota, functional module, network, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.957885/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/c543fe5e41cf4a579fdf024794be7974

Surfactant-assisted alkaline pretreatment and enzymatic hydrolysis of Miscanthus sinensis for enhancing sugar recovery with a reduced enzyme loading

Authors: Xiyu Cheng, Ying Luo, Yifan Gao, Shen Li, Chunming Xu, Shangyuan Tang, Yongkun Yang, Zehua Zhang, He Jiang, Hanli Xu, Shuobo Shi, Qiong Yan

Source: Frontiers in Bioengineering and Biotechnology, Vol 10 (2022)

Subject Terms: surfactant-assisted alkaline pretreatment, surfactant-assisted enzymatic hydrolysis, Miscanthus sinensis, poly (ethylene glycol) 2000, biomass, Biotechnology, TP248.13-248.65

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fbioe.2022.918126/full; https://doaj.org/toc/2296-4185

Access URL: https://doaj.org/article/9c3fd0c7dd8243deb78fef7819c450d4

CpG Site-Specific Methylation-Modulated Divergent Expression of PRSS3 Transcript Variants Facilitates Nongenetic Intratumor Heterogeneity in Human Hepatocellular Carcinoma

Authors: Shuye Lin, Hanli Xu, Mengdi Pang, Xiaomeng Zhou, Yuanming Pan, Lishu Zhang, Xin Guan, Xiaoyue Wang, Bonan Lin, Rongmeng Tian, Keqiang Chen, Xiaochen Zhang, Zijiang Yang, Fengmin Ji, Yingying Huang, Wu Wei, Wanghua Gong, Jianke Ren, Ji Ming Wang, Mingzhou Guo, Jiaqiang Huang

Source: Frontiers in Oncology, Vol 12 (2022)

Subject Terms: liver cancer, hepatocellular carcinoma, PRSS3, transcript variant, intratumor heterogeneity, CpG methylation, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fonc.2022.831268/full; https://doaj.org/toc/2234-943X

Access URL: https://doaj.org/article/3a0aaf074ab648fa893225acf5efb412

Evolutionary Pattern Comparisons of the SARS-CoV-2 Delta Variant in Countries/Regions with High and Low Vaccine Coverage

Authors: Jiahao Zhang, Linqian Fan, Hanli Xu, Yuanhui Fu, Xianglei Peng, Yanpeng Zheng, Jiemei Yu, Jinsheng He

Source: Viruses, Vol 14, Iss 10, p 2296 (2022)

Subject Terms: SARS-CoV-2, vaccine coverage, genetic divergence, co-mutation, immune pressure, methylation, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.mdpi.com/1999-4915/14/10/2296; https://doaj.org/toc/1999-4915

Access URL: https://doaj.org/article/5a4c5ca16bc14683adfe89921bd3ba4c

SNP-based and haplotype-based genomewide association on drug dependence in Han Chinese.

Authors: Hanli Xu, Yulin Kang, Tingming Liang, Sifen Lu, Xiaolin Xia, Zuhong Lu, Lingming Hu, Li Guo, Lishu Zhang, Jiaqiang Huang, Lin Ye, Peiye Jiang, Yi Liu, Li Xinyi, Jin Zhai, Zi Wang, Yangyang Liu, School of Education, Tianjin University, Tianjin 200350, China.

Source: BMC Genomics; 3/6/2024, Vol. 25 Issue 1, p1-12, 12p, 1 Chart, 4 Graphs

Optical Genome Mapping Reveals Novel Structural Variants in Lymphoblastic Lymphoma.

Authors: Hanli Xu, Huixia Gao, Chanjuan Wang, Xiyu Cheng, Zhigang Li, Cui Lei, XiaoTong Huang, Weijing Li, Zhixia Yue, Shuo Tian, Xiaoxi Zhao, Tianlin Xue, Tianyu Xing, Jun Li, Ying Wang, Yanlong Duan, Tianyou Wang, Ruidong Zhang

Source: Journal of Pediatric Hematology/Oncology; Jan2024, Vol. 46 Issue 1, pe71-e82, 12p

Detecting Local Haplotype Sharing and Haplotype Association.

Authors: Hanli Xu^1,2, Yongtao Guan^1,3,4, yongtaog@bcm.edu

Source: Genetics; Jul2014, Vol. 197 Issue 3, following p823-838, 24p

Clustering HIV infections among MSM fuelled by drug and internet.

Authors: Xiangyu Yan, Hanli Xu, Yongjie Li, Hexuan Su, Bo Zhang, Zhongwei Jia

Source: Sexually Transmitted Infections; Mar2022, Vol. 98 Issue 2, p153-153, 1p