Pseudogenes, RNAs and new reproducibility norms

Authors: George A Calin

Source: eLife, Vol 9 (2020)

Subject Terms: Reproducibility Project: Cancer Biology, replication, metascience, PTEN, noncoding RNA, pseudogene, Medicine, Science, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://elifesciences.org/articles/56397; https://doaj.org/toc/2050-084X

Access URL: https://doaj.org/article/065e184ec18b47919a5c26e664664b81

DNA methylation classifier to diagnose pancreatic ductal adenocarcinoma metastases from different anatomical sites

Authors: Teodor G. Calina, Eilís Perez, Elena Grafenhorst, Jamal Benhamida, Simon Schallenberg, Adrian Popescu, Ines Koch, Tobias Janik, BaoQing Chen, Jana Ihlow, Stephanie Roessler, Benjamin Goeppert, Bruno Sinn, Marcus Bahra, George A. Calin, Eliane T. Taube, Uwe Pelzer, Christopher C. M. Neumann, David Horst, Erik Knutsen, David Capper, Mihnea P. Dragomir

Source: Clinical Epigenetics, Vol 16, Iss 1, Pp 1-17 (2024)

Subject Terms: Pancreatic ductal adenocarcinoma, DNA methylation, Molecular diagnosis, Cancer of unknown primary, Epigenetics, Medicine, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1868-7083

Access URL: https://doaj.org/article/6d749e8836f14bb88e912de9ad31cd5f

miR-195 inhibits macrophages pro-inflammatory profile and impacts the crosstalk with smooth muscle cells.

Authors: Joao Paulo Bras, Andreia Machado Silva, George A Calin, Mario Adolfo Barbosa, Susana Gomes Santos, Maria Ines Almeida

Source: PLoS ONE, Vol 12, Iss 11, p e0188530 (2017)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC5699821?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/22c4c384f2d84a06a92e14911b96fa50

Circulating miRNAs in sepsis-A network under attack: An in-silico prediction of the potential existence of miRNA sponges in sepsis.

Authors: Catalin Vasilescu, Mihnea Dragomir, Mihai Tanase, Dana Giza, Raluca Purnichescu-Purtan, Meng Chen, Sai-Ching Jim Yeung, George A Calin

Source: PLoS ONE, Vol 12, Iss 8, p e0183334 (2017)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC5562310?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/b56d6ee3d2a8441cafa7462e6bdbea3a

The DLEU2/miR-15a/miR-16-1 cluster shapes the immune microenvironment of chronic lymphocytic leukemia

Authors: Ronghua Zhang, Priyanka Khare, Priyanka Banerjee, Cristina Ivan, Sarah Schneider, Federica Barbaglio, Karen Clise-Dwyer, Vanessa Behrana Jensen, Erika Thompson, Marisela Mendoza, Nicholas Chiorazzi, Shih-Shih Chen, Xiao-Jie Joy Yan, Nitin Jain, Paolo Ghia, Federico Caligaris-Cappio, Rima Mendonsa, Sashi Kasimsetty, Ryan Swoboda, Recep Bayraktar, William Wierda, Varsha Gandhi, George A. Calin, Michael J. Keating, Maria Teresa Sabrina Bertilaccio

Source: Blood Cancer Journal, Vol 14, Iss 1, Pp 1-12 (2024)

Subject Terms: Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2044-5385

Access URL: https://doaj.org/article/2643535025b44b18b47bc2931c44d1e2

MicroRNAs are enriched at COVID-19 genomic risk regions, and their blood levels correlate with the COVID-19 prognosis of cancer patients infected by SARS-CoV-2

Authors: Simone Anfossi, Faezeh Darbaniyan, Joseph Quinlan, Steliana Calin, Masayoshi Shimizu, Meng Chen, Paola Rausseo, Michael Winters, Elena Bogatenkova, Kim-Anh Do, Ivan Martinez, Ziyi Li, Loredana Antal, Tudor Rares Olariu, Ignacio Wistuba, George A. Calin

Source: Molecular Cancer, Vol 23, Iss 1, Pp 1-17 (2024)

Subject Terms: MiRNAs, Genomics, Cancer, COVID-19, SARS-CoV-2, Plasma biomarkers, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1476-4598

Access URL: https://doaj.org/article/6fe26fed80f541c6b9db9eafb0c7839c

Translational modeling-based evidence for enhanced efficacy of standard-of-care drugs in combination with anti-microRNA-155 in non-small-cell lung cancer

Authors: Prashant Dogra, Vrushaly Shinglot, Javier Ruiz-Ramírez, Joseph Cave, Joseph D. Butner, Carmine Schiavone, Dan G. Duda, Ahmed O. Kaseb, Caroline Chung, Eugene J. Koay, Vittorio Cristini, Bulent Ozpolat, George A. Calin, Zhihui Wang

Source: Molecular Cancer, Vol 23, Iss 1, Pp 1-19 (2024)

Subject Terms: Non-small-cell lung cancer, microRNA, Nanomedicine, Mathematical modeling, Pharmacokinetics, Pharmacodynamics, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1476-4598

Access URL: https://doaj.org/article/f5c916f279b74e3c88a10c02785cb0e7

In Vivo Delivery of miR-34a Sensitizes Lung Tumors to Radiation Through RAD51 Regulation

Authors: Maria Angelica Cortez, David Valdecanas, Sharareh Niknam, Heidi J Peltier, Lixia Diao, Uma Giri, Ritsuko Komaki, George A Calin, Daniel R Gomez, Joe Y Chang, John Victor Heymach, Andreas G Bader, James William Welsh

Source: Molecular Therapy: Nucleic Acids, Vol 4, Iss C (2015)

Subject Terms: miR-34a, non-small-cell lung cancer, RAD51, radiation, Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2162253116300567; https://doaj.org/toc/2162-2531

Access URL: https://doaj.org/article/1d4cc5d09bf64a3f8a6b6dcc5d3c7696

miRNA as potential biomarkers of breast cancer in the Lebanese population and in young women: a pilot study.

Authors: Farah J Nassar, Maya El Sabban, Nathalie K Zgheib, Arafat Tfayli, Fouad Boulos, Mark Jabbour, Nagi S El Saghir, Rabih Talhouk, Ali Bazarbachi, George A Calin, Rihab Nasr

Source: PLoS ONE, Vol 9, Iss 9, p e107566 (2014)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4169426?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/07ca1395306f45ce83dd19183e72a071

High serum miR-19a levels are associated with inflammatory breast cancer and are predictive of favorable clinical outcome in patients with metastatic HER2+ inflammatory breast cancer.

Authors: Simone Anfossi, Antonio Giordano, Hui Gao, Evan N Cohen, Sanda Tin, Qiong Wu, Raul J Garza, Bisrat G Debeb, Ricardo H Alvarez, Vicente Valero, Gabriel N Hortobagyi, George A Calin, Naoto T Ueno, Wendy A Woodward, James M Reuben

Source: PLoS ONE, Vol 9, Iss 1, p e83113 (2014)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3885405?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/feaa701ac9bd409a824be6831dd824c3

Allele frequencies of variants in ultra conserved elements identify selective pressure on transcription factor binding.

Authors: Toomas Silla, Katrin Kepp, E Shyong Tai, Liang Goh, Sonia Davila, Tina Catela Ivkovic, George A Calin, P Mathijs Voorhoeve

Source: PLoS ONE, Vol 9, Iss 11, p e110692 (2014)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4219694?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/3fa302a4e0474c78a284e4e44fa94713

HuR controls glutaminase RNA metabolism

Authors: Douglas Adamoski, Larissa M. dos Reis, Ana Carolina Paschoalini Mafra, Felipe Corrêa-da-Silva, Pedro Manoel Mendes de Moraes-Vieira, Ioana Berindan-Neagoe, George A. Calin, Sandra Martha Gomes Dias

Source: Nature Communications, Vol 15, Iss 1, Pp 1-20 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/8fabf42235f24948a4ddc00bcad4e613

Multiple omics levels of chronic lymphocytic leukemia

Authors: Aleksander Turk, Eva Čeh, George A. Calin, Tanja Kunej

Source: Cell Death Discovery, Vol 10, Iss 1, Pp 1-14 (2024)

Subject Terms: Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282, Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/2058-7716

Access URL: https://doaj.org/article/c51ef9b81ba94ad99eab651d3b79b972

Wnt signaling regulates the lineage differentiation potential of mouse embryonic stem cells through Tcf3 down-regulation.

Authors: Yaser Atlasi, Rubina Noori, Claudia Gaspar, Patrick Franken, Andrea Sacchetti, Haleh Rafati, Tokameh Mahmoudi, Charles Decraene, George A Calin, Bradley J Merrill, Riccardo Fodde

Source: PLoS Genetics, Vol 9, Iss 5, p e1003424 (2013)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3642041?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/80d2f51250424bcabe8ff7e8779eac5e

Signal transducer and activator of transcription-3 induces microRNA-155 expression in chronic lymphocytic leukemia.

Authors: Ping Li, Srdana Grgurevic, Zhiming Liu, David Harris, Uri Rozovski, George A Calin, Michael J Keating, Zeev Estrov

Source: PLoS ONE, Vol 8, Iss 6, p e64678 (2013)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3672147?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/66605b43ae714e0383a90b1ecb772ce6

Expression, tissue distribution and function of miR-21 in esophageal squamous cell carcinoma.

Authors: Nazila Nouraee, Katrien Van Roosbroeck, Mohammad Vasei, Shahriar Semnani, Nader Mansour Samaei, Farshad Naghshvar, Abbas Ali Omidi, George A Calin, Seyed Javad Mowla

Source: PLoS ONE, Vol 8, Iss 9, p e73009 (2013)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3769386?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/9e4d9197ca5c4a28957826369b647711

Modulation of MicroRNA-194 and cell migration by HER2-targeting trastuzumab in breast cancer.

Authors: Xiao-Feng Le, Maria I Almeida, Weiqun Mao, Riccardo Spizzo, Simona Rossi, Milena S Nicoloso, Shu Zhang, Yun Wu, George A Calin, Robert C Bast

Source: PLoS ONE, Vol 7, Iss 7, p e41170 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3400637?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/e65c0d4d56bd4cecb7cea70628efe22c

MicroRNA fingerprints identify miR-150 as a plasma prognostic marker in patients with sepsis.

Authors: Catalin Vasilescu, Simona Rossi, Masayoshi Shimizu, Stefan Tudor, Angelo Veronese, Manuela Ferracin, Milena S Nicoloso, Elisa Barbarotto, Monica Popa, Oana Stanciulea, Michael H Fernandez, Dan Tulbure, Carlos E Bueso-Ramos, Massimo Negrini, George A Calin

Source: PLoS ONE, Vol 4, Iss 10, p e7405 (2009)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/19823581/pdf/?tool=EBI; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/bfc87831f1364d7f873b2a5ae82bd971

Anti–miR-93-5p therapy prolongs sepsis survival by restoring the peripheral immune response

Authors: Mihnea P. Dragomir, Enrique Fuentes-Mattei, Melanie Winkle, Keishi Okubo, Recep Bayraktar, Erik Knutsen, Aiham Qdaisat, Meng Chen, Yongfeng Li, Masayoshi Shimizu, Lan Pang, Kevin Liu, Xiuping Liu, Simone Anfossi, Huanyu Zhang, Ines Koch, Anh M. Tran, Swati Mohapatra, Anh Ton, Mecit Kaplan, Matthew W. Anderson, Spencer J. Rothfuss, Robert Silasi, Ravi S. Keshari, Manuela Ferracin, Cristina Ivan, Cristian Rodriguez-Aguayo, Gabriel Lopez-Berestein, Constantin Georgescu, Pinaki P. Banerjee, Rafet Basar, Ziyi Li, David Horst, Catalin Vasilescu, Maria Teresa S. Bertilaccio, Katayoun Rezvani, Florea Lupu, Sai-Ching Yeung, George A. Calin

Source: The Journal of Clinical Investigation, Vol 133, Iss 14 (2023)

Subject Terms: Immunology, Infectious disease, Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/1558-8238

Access URL: https://doaj.org/article/d4033ceefb364ffba4d3f09a718cc569

Author Correction: Regulation of hnRNPA1 by microRNAs controls the miR-18a-K-RAS axis in chemotherapy-resistant ovarian cancer

Authors: Cristian Rodriguez-Aguayo, Paloma del C Monroig, Roxana S. Redis, Emine Bayraktar, Maria I. Almeida, Cristina Ivan, Enrique Fuentes-Mattei, Mohammed H. Rashed, Arturo Chavez-Reyes, Bulent Ozpolat, Rahul Mitra, Anil K. Sood, George A. Calin, Gabriel Lopez-Berestein

Source: Cell Discovery, Vol 9, Iss 1, Pp 1-2 (2023)

Subject Terms: Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/2056-5968

Access URL: https://doaj.org/article/283a624e6aa44d74b6ef9b835ca8e7fc