A Mapper Algorithm with implicit intervals and its optimization

Authors: Tao, Yuyang, Ge, Shufei

Subject Terms: Computer Science - Machine Learning, Statistics - Machine Learning

Access URL: http://arxiv.org/abs/2412.11631

A spatial-correlated multitask linear mixed-effects model for imaging genetics

Authors: Pu, Zhibin, Ge, Shufei

Subject Terms: Statistics - Methodology, 62-08 (Primary) 62J05 (Secondary)

Access URL: http://arxiv.org/abs/2407.04530

A distribution-guided Mapper algorithm

Authors: Tao, Yuyang, Ge, Shufei

Subject Terms: Mathematics - Algebraic Topology, Computer Science - Machine Learning, Quantitative Biology - Quantitative Methods

Access URL: http://arxiv.org/abs/2401.12237

A distribution-guided Mapper algorithm.

Authors: Tao, Yuyang¹ (AUTHOR) taoyy2022@shanghaitech.edu.cn, Ge, Shufei¹ (AUTHOR) geshf@shanghaitech.edu.cn

Source: BMC Bioinformatics. 3/5/2025, Vol. 26 Issue 1, p1-19. 19p.

Subject Terms: *GRAPH algorithms, *NUCLEOTIDE sequence, *CORONAVIRUSES, *DATA analysis, *DATA modeling

Shape Modeling with Spline Partitions

Authors: Ge, Shufei, Wang, Shijia, Elliott, Lloyd

Subject Terms: Statistics - Machine Learning, Computer Science - Machine Learning

Access URL: http://arxiv.org/abs/2108.02507

Adaptive semiparametric Bayesian differential equations via sequential Monte Carlo

Authors: Wang, Shijia, Ge, Shufei, Doig, Renny, Wang, Liangliang

Subject Terms: Statistics - Computation

Access URL: http://arxiv.org/abs/2002.02571

Random Tessellation Forests

Authors: Ge, Shufei, Wang, Shijia, Teh, Yee Whye, Wang, Liangliang, Elliott, Lloyd T.

Subject Terms: Statistics - Machine Learning, Computer Science - Machine Learning

Access URL: http://arxiv.org/abs/1906.05440

A Bayesian Spatial Model for Imaging Genetics

Authors: Song, Yin, Ge, Shufei, Cao, Jiguo, Wang, Liangliang, Nathoo, Farouk S.

Subject Terms: Statistics - Methodology

Access URL: http://arxiv.org/abs/1901.00068

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A Bayesian spatial model for imaging genetics.

Authors: Song, Yin¹ (AUTHOR), Ge, Shufei² (AUTHOR), Cao, Jiguo³ (AUTHOR), Wang, Liangliang³ (AUTHOR), Nathoo, Farouk S.¹ (AUTHOR) nathoo@uvic.ca

Source: Biometrics. Jun2022, Vol. 78 Issue 2, p742-753. 12p.

Subject Terms: *MAGNETIC resonance imaging, *ALZHEIMER'S disease, *SINGLE nucleotide polymorphisms, *GIBBS sampling, *FALSE discovery rate

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Genome-Wide Association with Uncertainty in the Genetic Similarity Matrix.

Authors: Wang, Shijia¹ (AUTHOR), Ge, Shufei² (AUTHOR), Sobkowiak, Benjamin³ (AUTHOR), Wang, Liangliang⁴ (AUTHOR), Grandjean, Louis⁵ (AUTHOR), Colijn, Caroline³ (AUTHOR), Elliott, Lloyd T.⁴ (AUTHOR) lloyd.elliott@sfu.ca

Source: Journal of Computational Biology. Feb2023, Vol. 30 Issue 2, p189-203. 15p.

Subject Terms: *GENOME-wide association studies, *MARKOV chain Monte Carlo, *MARKOV processes, *MULTIDRUG resistance

Dental Arch Development of Chinese Adolescents: A Retrospective Cross-Sectional Study

Authors: Liu, Chao, Chen, Jieyi, Cui, Mengjuan, Wang, Zhengliang, Shi, Wentao, Du, Siyuan, Feng, Yang, Zhang, Manfei, Li, Zhenxia, Ge, Shufei, Fang, Bing

Source: International Dental Journal; 20250101, Issue: Preprints

Efficient computation of the kinship coefficients.

Authors: Kirkpatrick, Brent¹ bbkirk@intrepidnetcomputing.com, Ge, Shufei², Wang, Liangliang² bbkirk@intrepidnetcomputing.com

Source: Bioinformatics. 3/15/2019, Vol. 35 Issue 6, p1002-1008. 7p.

Subject Terms: *KINSHIP, *GEOMETRIC vertices, *INBREEDING, *ALLELES, *HERALDRY

Frequency distribution of the hereditary Alzheimer's disease-related genes seems to fit Poisson distribution, why?

Authors: Ge, Shufei, Cai, Mingliang, Pei, Gang

Source: Cell Discovery; 7/28/2022, Vol. 8 Issue 1, p1-2, 2p

Subject Terms: POISSON distribution, DISTRIBUTION (Probability theory), ALZHEIMER'S disease