CCL17 Promotes Colitis-Associated Tumorigenesis Dependent on the Microbiota

Authors: Metzger, Rebecca, Winter, Lis, Bouznad, Nassim, Garzetti, Debora, von Armansperg, Benedikt, Rokavec, Matjaz, Lutz, Konstantin, Schäfer, Yvonne, Krebs, Sabrina, Winheim, Elena

Source: Journal of immunology. 209(11):2227-2238

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN630660152&indx=1&recIds=ETOCRN630660152

Mucispirillum schaedleri Antagonizes Salmonella Virulence to Protect Mice against Colitis

Authors: Herp, Simone, Brugiroux, Sandrine, Garzetti, Debora, Ring, Diana, Jochum, Lara M., Beutler, Markus, Eberl, Claudia, Hussain, Saib, Walter, Steffi, Gerlach, Roman G., Ruscheweyh, Hans J., Huson, Daniel, Sellin, Mikael E., Slack, Emma, Hanson, Buck, Loy, Alexander, Baines, John F., Rausch, Philipp, Basic, Marijana, Bleich, André, Berry, David, Stecher, Bärbel

Source: In Cell Host & Microbe 8 May 2019 25(5):681-694

Microbiota differences between commercial breeders impacts the post-stroke immune response

Authors: Sadler, Rebecca, Singh, Vikramjeet, Benakis, Corinne, Garzetti, Debora, Brea, David, Stecher, Bärbel, Anrather, Josef, Liesz, Arthur

Source: In Brain Behavior and Immunity November 2017 66:23-30

Chapter 59 - Yersinia enterocolitica

Authors: Rakin, Alexander, Garzetti, Debora, Bouabe, Hicham, Sprague, Lisa D., Chen, Jingyu

Source: In Molecular Medical Microbiology Edition: Third Edition. 2024:1223-1248

A molecular scheme for Yersinia enterocolitica patho-serotyping derived from genome-wide analysis

Authors: Garzetti, Debora, Susen, Rosa, Fruth, Angelika, Tietze, Erhard, Heesemann, Jürgen, Rakin, Alexander

Source: In International Journal of Medical Microbiology May 2014 304(3-4):275-283

Usability of rectal swabs for microbiome sampling in a cohort study of hematological and oncological patients.

Authors: Biehl, Lena M.^1,2,3, Garzetti, Debora^4,5, Farowski, Fedja^1,3, Ring, Diana⁴, Koeppel, Martin B.^4,5, Rohde, Holger^2,6, Schafhausen, Philippe⁷, Stecher, Bärbel^4,5, Vehreschild, Maria J. G. T.^1,3,8 maria.vehreschild@uk-koeln.de

Source: PLoS ONE. 4/15/2019, Vol. 14 Issue 4, p1-17. 17p.

Subject Terms: *COHORT analysis, *DNA, *HUMAN microbiota

Genome-based characterization of Yersinia enterocolitica :patho-evolution and adaptation of a versatile bacterium

Authors: Garzetti, Debora

Contributors: Heesemann, Jürgen

Availability: http://data.europeana.eu/aggregation/europeana/2048441/item_SE7TIUHFK3NIWPDH6TRVXA4FMTRX6XSF

List of contributors

Authors: Aizawa, Shin-Ichi, Alberdi, Pilar, Alexander, David C., Alía, Alberto, Allison, D.G., Amyes, Sebastian G.B., An, Haoran, Andrade, María J., Antelmann, Haike, Arias, Cesar A., Asensio, Miguel A., Axell-House, Dierdre B., Bae, Hee-Won, Baena, Laura Muñoz, Baig, Abdul Mannan, Bailey, Spenser O., Baize, Sylvain, Baldi, Pablo C., Barbosa, Angela Silva, Barbuddhe, Sukhadeo B., Bard, Emilie, Barry, Eileen M., Basarab, Gregory S., Beloborodova, N.V, Bermúdez, Elena, Bidmos, Fadil A., Bisgaard, Magne, Blakely, Garry W., Bloch, Evan, Boesen, Thias Oberg, Bose, Dipayan, Botero, Javier Enrique, Bouabe, Hicham, Bouchard, Michael J., Bozue, Joel A., Bradbury, Richard S., Brett Moreau, G., Cabezas-Cruz, Alejandro, Cai, Rong-Jun, Calderón, Enrique J., Cao, Boyang, Carmena, David, Carvalho, Eneas, Caulfield, Amanda D., Cen, Shan, Chai, Jong-Yil, Chamberland, Robin R., Champredon, David, Chan, Edward D., Charbon, Godefroid, Chato, Connor, Chelomina, G.N., Chen, Jingyu, Chen, Min, Chen, Shuyu, Chen, Suilin, Chen, Yanfei, Chen, Zhaoyuan, Cheng, Aimin, Cheng, Keding, Chiu, Charles Y., Cho, You-Hee, Christensen, Henrik, Chernevskaya, Ekaterina A., Contreras, Adolfo, Contreras, Marinela, Córdoba, Juan J., Córdoba, María G., Costa, Rita, Cote, Christopher K., Cui, Xiangling, Cui, Yujun, Dacal, Elena, Dammann, Allison N., Das, Shubhagata, Dashti, Alejandro, de la Fuente, José, de la Garza, Mireya, Delgado, Josué, Delgado-Cuesta, Juan, Deng, Haiteng, Deng, Li, Dey, Debajit, Dhama, Kuldeep, Diego, Juan García-Bernalt, Ding, Hao, Doern, Christopher D., Dorman, Charles J., Du, Zongmin, Dunbar, Sherry A., Duthie, Malcolm, Dybvig, Kevin F., Eakin, Ann E., Eallonardo, Samuel J., Eberly, Allison R., Echeverry, Adriana Jaramillo, Egland, Paul G., El Zowalaty, Mohamed E., Endsley, Janice Jones, Eom, Keeseon S., Evans, Benjamin A., Falkinham, Joseph O., Feng, Siwei, Feng, Yaoyu, Feng, Zongdi, Fernández-Soto, Pedro, Ferreira, Roux-Cil, Flores-Huerta, Nadia, Foster, Timothy J., Fox-Moon, Sandra M., Fraga, Tatiana Rodrigues, Fredricks, David N., Freitag, Nancy E., Frimodt-Møller, Jakob, Fuller, Risa, Ganesh, Balasubramanian, Gao, Ning, García-Carnero, Laura C., Garzetti, Debora, Geoghegan, Joan A., Ghenim, Raed, Giambartolomei, Guillermo H., Gilbert, Nicole M., Gillis, Thomas Phillip, Gladstone, Camilla A., Gómez-Gaviria, Manuela, Gómez-Marín, Jorge E., Gong, Tengfang, González, Ramón A., Gray-Owen, Scott D., Gu, Bing, Guzmán-Téllez, Paula, Hajal, Caroline, Han, Yanping, Hao, Yi, Harrington, Amanda T., Harris, Jason B., Harvill, Eric T., Hasan, S. Saif, He, Guang-Jun, He, Yongqun, Heffron, Jared D., Hidalgo, Paloma, Hindiyeh, Musa Y., Hreha, Teri N., Hu, Xiaoyu, Huang, Guanghua, Huang, Jiangqing, Huang, Liang, Huang, Shifeng, Huang, Xingxu, Huang, Xueting, Huang, Yilun, Huffman, Anthony, Humphreys, Tricia L., Hunstad, David A., Inglis, Timothy J.J., Isaac, Lourdes, Jacobs, Samantha E., Janowicz, Diane M., Jeon, Hyeong-Kyu, Ji, Quanjiang, Jia, Qi, Jia, Wei, Jin, Shouguang, Jneidi, Lama, Jose, Shinsmon, Jung, Bong-Kwang, Kattan, Randa, Kaushik, Rahul, Khare, Reeti, Kim, Eun Sook, Kirn, Thomas J., Koo, Hyun, Köster, Pamela C., Krause, Peter J., Kumar, Sanjai, Kupz, Andreas, Lambert, P.A., Lamont, Richard J., Langford, Paul R., Lebeaux, David, Legname, Giuseppe, Li, Bin, Li, Chunhao, Li, Fen, Li, Jun, Li, Lanjuan, Li, Ruofan, Li, Ruoyu, Li, Ting, Li, Yang-Yang, Li, Yanhua, Li, Zhuorong, Liang, Xiaomeng, Liao, Guojian, Lin, Ping, Ling, Yun, Liu, Bo, Liu, Dongyou, Liu, Guohua, Liu, Huidi, Liu, Jiafeng, Liu, Jintao, Liu, Qi, Liu, Shu-Lin, Liu, Taiping, Liu, Tongbao, Liu, Wei, Liu, Yan, Liu, Yanni, Liu, Yisong, Liu, Yuan, Løbner-Olesen, Anders, Loeffelholz, Michael, Lu, Hongzhou, Luna, Brian, Ma, Bingting, Ma, Chengying, Ma, Shuang, Ma, TianLi, Madan, Rajat, Mahle, Rachael E., Mahlen, Steven D., Malik, Satya Veer Singh, Malik, Yashpal Singh, Malvy, Denis, Mann, Barbara J., Marasini, Daya, Maris, Alexander S., Marjomäki, Varpu, Marjuki, Henju, Martín, Alberto, Martín, Irene, Martínez-Castillo, Moisés, Martínez-Pabón, María Cecilia, Mathison, Blaine A., Ma’ayeh, Showgy, McDowell, Andrew, McLaughlin, Stephanie E., McSheffrey, Gordon G., Medrano, Francisco J., Meehan, Conor J., Mehta, Dhwani, Mejía-Oquendo, Manuela, Melo-Cristino, José, Mendoza-Barberá, Elena, Meng, Xinan, Merino, Susana, Merritt, Adam J., Miller, Steve, Miller, William R., Minamino, Tohru, Mirzaei, Mohammadali Khan, Mora-Montes, Héctor M., Mortensen, Joel, Mostafa, Heba H., Muhsen, Khitam, Mujahed, Ahlam, Muro, Antonio, Murphy, Olwen C., Newton, Hayley J., Nguyen, April H., Nichols, Wright W., Niu, Siqiang, Núñez, Félix, Obregon, Dasiel, Okamoto, Akira, Okutani, Akiko, Olabode, Abayomi, Omar, Muna, Ong, Edison, Ouyang, Zhiming, Pacak, Christina A., Pacheco-Yépez, Judith, Palmer, John, Pang, Xiaoli, Paredes-Sabja, Daniel, Peng, Zhong, Peng, Zonggen, Pérez-Nevado, Francisco, Poon, Art, Pospíšilová, Petra, Potts, Caelin C., Pu, Qinqin, Pujic, Petar, Qi, Rui, Qian, Chenyun, Qian, Liu, Qin, Aiping, Qu, Fen, Rakin, Alexander, Ramesh, Ashwin, Ramirez, Mario, Rao, Yu, Ratner, Adam J., Rawool, Deepak B., Rehman, Asma, Ren, Jie, Ren, Ping, Retchless, Adam C., Robertson, Erle S., Rodríguez, Alicia, Rodriguez, Azucena, Rodríguez-Medina, Carolina, Rodriguez-Nava, Veronica, Rohde, Manfred, Romero-Rodríguez, Alba, Rosales-Morgan, Gabriela, Rosenkranz, Andrea L., Ruiz-Moyano, Santiago, Ruokolainen, Visa, Sabateen, Ali, Sahu, Radhakrishna, Sails, Andrew, Sang, Yu, Santana, Clarissa H., Santos, Jesus A., Santos, Renato L., Schmitz, Jonathan E., Serrano-Luna, Jesús, Shen, Jianzhong, Shen, Zhangqi, Shibayama, Mineko, Shirtliff, Mark E., Silva-Costa, Catarina, Silva-Olivares, Angélica, Singh, Niraj Kumar, Šmajs, David, Smith, Robert P., Smith, Sophie, Snyder, Lori A.S., Song, Yinggai, Soro, Aurea Simon, Spearman, Paul, Spellberg, Brad, Sprague, Lisa D., Stratton, Charles W., Strenk, Susan M., Strugnell, Richard A., Sun, Keer, Suo, Xun, Suzuki-Hatano, Silveli, Svärd, Staffan, Talbot, Elizabeth A., Tamez-Castrellón, Alma K., Tan, Nie, Tang, Cynthia Y., Tang, Yi-Wei, Tao, Jia, Tao, Lili, Terrero-Salcedo, David, Tharmalingam, Jayaraman, Thwe, Phyu M., Tiamani, Kawtar, Tomás, Juan M., Topaz, Nadav, Tsai, Ang-Chen, Tsalik, Ephraim L., Tuomanen, Elaine I., Turenne, Christine Y., Tyagi, Anuj, Uprety, Priyanka, Valour, Florent, van Hensbergen, Vincent P., Venkatesan, Arun, Vergis, Jess, Villar, Margarita, Vollmer, Waldemar, Waites, Ken B., Wan, Xiu-Feng, Wang, Guiqing, Wang, Lijun, Wang, Lin, Wang, Linqi, Wang, Xiangru, Wang, Xin, Wang, Xinjie, Wang, Ya-Ting, Wang, Yang, Wang, Yating, Weil, Ana A., Welkos, Susan L., Wengenack, Nancy L., Westblade, Lars F., Whitfield, Chris, Wu, Hui, Wu, Lijuan, Wu, Min, Wu, Yarong, Wu, Zhaowei, Xiang, Ye, Xiao, Di, Xiao, Li, Xiao, Lihua, Xu, Tao, Xu, Wenyue, Xu, Xinping, Xue, Jinling, Yadav, Jay Prakash, Yan, Junxiang, Yan, Yixin, Yang, Changmei, Yang, Ruifu, Yang, Ying, Yao, Kaihu, Yao, Yu-Feng, Yeakle, Kyle C., Yu, Demin, Yu, Hao, Yu, Xue-Jie, Yuan, Zhenghong, Zai, Wenjing, Zhang, Jianzhong, Zhang, Jing-Ren, Zhang, Lanyue, Zhang, Lijie, Zhang, Qiwei, Zhang, Wenbao, Zhang, Wenhong, Zhang, Xinxin, Zhao, Youbao, Zhou, Chuanmin, Zhu, Feng, Zhu, Jingting, Zhu, Yongqun

Source: In Molecular Medical Microbiology Edition: Third Edition. 2024:xv-xxx

Tracing genomic variations in two highly virulent Yersinia enterocolitica strains with unequal ability to compete for host colonization

Authors: Garzetti Debora, Bouabe Hicham, Heesemann Juergen, Rakin Alexander

Source: BMC Genomics, Vol 13, Iss 1, p 467 (2012)

Subject Terms: Yersinia enterocolitica, Hyper-virulent, Genome comparison, Diversity, Host colonization, Virulence factors, YscP, YopM, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: http://www.biomedcentral.com/1471-2164/13/467; https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/a0893f9138274fa2ae67cf9f04fa6db0

Chapter 73 - Yersinia enterocolitica

Authors: Rakin, Alexander, Garzetti, Debora, Bouabe, Hicham, Sprague, Lisa D.

Source: In Molecular Medical Microbiology Edition: Second Edition. 2015:1319-1344

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Microbiome Analysis from Paired Mucosal and Fecal Samples of a Colorectal Cancer Biobank.

Authors: Wirth, Ulrich¹ (AUTHOR) Ulrich.Wirth@med.uni-muenchen.de, Garzetti, Debora^2,3 (AUTHOR) Debora.garzetti@gmail.com, Jochum, Lara M.² (AUTHOR) Laramjochum@gmail.com, Spriewald, Stefanie² (AUTHOR) Sj.spriewald@gmx.de, Kühn, Florian¹ (AUTHOR) Florian.Kuehn@med.uni-muenchen.de, Ilmer, Matthias^1,4 (AUTHOR) Matthias.Ilmer@med.uni-muenchen.de, Lee, Serene M. L.^1,5 (AUTHOR) Serene.Lee@med.uni-muenchen.de, Niess, Hanno^1,5 (AUTHOR) Hanno.Niess@med.uni-muenchen.de, Bazhin, Alexandr V.^1,4 (AUTHOR) Alexandr.Bazhin@med.uni-muenchen.de, Andrassy, Joachim^1,4 (AUTHOR) Joachim.Andrassy@med.uni-muenchen.de, Werner, Jens^1,4 (AUTHOR) Jens.Werner@med.uni-muenchen.de, Stecher, Barbara^2,3 (AUTHOR) stecher@mvp.lmu.de, Schiergens, Tobias S.^1,4,5 (AUTHOR) tobias.schiergens@med.uni-muenchen.de

Source: Cancers. Dec2020, Vol. 12 Issue 12, p3702. 1p.

Subject Terms: *FECAL analysis, *RNA analysis, *ANALYSIS of variance, *BACTERIA, *COLLECTION & preservation of biological specimens, *COLON tumors, *MULTIVARIATE analysis, *TISSUE banks, *GUT microbiome, *DESCRIPTIVE statistics, RECTUM tumors

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List of Contributors

Authors: Abel-Santos, Ernesto, Abraham, Soman N., Aizawa, Shin-Ichi, Aldape, Michael J., Alexander, David C., Allison, David G., Amyes, Sebastian G.B., Anderson, Burt E., Anderson, Frank J., Antelmann, Haike, Austin, Frank W., Ayllón, Nieves, Bai, Fang, Barbosa, Angela Silva, Barer, Michael R., Basarab, Gregory S., Beaman, Blaine L., Beard, Matthew, Black, Carolyn M., Blakely, Garry W., Boiron, Patrick, Bouabe, Hicham, Bozue, Joel A., Brinkman, Cassandra L., Brubaker, Robert R., Bryant, Amy E., Cain, Robert J., Calvo, Ana Cristina, Carvalho, Eneas, Capo, Christian, Castillo-Ramirez, Santiago, Chaddock, John A., Chamberland, Robin R., Clarridge, Jill E., III, Cote, Christopher K., Cox, Sarah L., Cutler, Sally J., Davidson, Donald J., Day, Nicholas P.J., de la Fuente, José, De Jesus, Magdia, Dorin, Julia R., Dorman, Charles J., Eakin, Ann E., Egland, Paul G., Ellis, Simon, Enright, Mark C., Evans, Benjamin A., Everett, Jake A., Falkinham, Joseph O., Fan, Feinan, Fan, Huizhou, Faulds-Pain, Alexandra, Feil, Edward J., Figueroa, Cesar J., Forsberg, Åke, Foster, Timothy J., Fox-Moon, Sandra M., Fraga, Tatiana Rodrigues, Fredricks, David N., Freitag, Nancy E., García-López, María-Luisa, Garzetti, Debora, Gemmell, Curtis G., Geoghegan, Joan A., Gillis, Thomas P., Gilmore, Michael S., Goldstone, Robert J., Gray-Owen, Scott D., Guiso, Nicole, Hallstrom, Kelly N., Harper, David R., Harrington, Amanda T., Harris, Jason B., Hays, John P., He, Yongqun, Heffron, Jared D., Heimer, Susan R., High, Nicola J., Hobot, Jan A., Hultgren, Scott, Humphreys, Tricia L., Hunstad, David A., Igietseme, Joseph U., Inglis, Neil F., Inglis, Tim J.J., Isaac, Lourdes, Janowicz, Diane M., Jin, Shouguang, Jin, Yongxin, Johansson, Anna-Lena, Johnston, Randal N., Jones, Jessica L., Justice, Sheryl S., Kaakoush, Nadeem O., Kalas, Vasilios, Khare, Reeti, Jordan, I. King, Kobayashi, Keiko, Kocan, Katherine M., Könönen, Eija, Kumar, Purnima S., Lambert, Peter A., Lamont, Richard J., Lan, Ruiting, Lang, Sue, Lereclus, Didier, Levett, Paul N., Li, Xuefeng, Liu, Dongyou, Liu, Shu-Lin, Ma, Lin, Mahlen, Steven D., Man, Si Ming, Margolis, Elisa, Marrie, Thomas J., Martin, Melissa J., Mayer, Leonard W., McConville, Malcolm, McCormick, Beth A., McDowell, Andrew, McHugh, Brian J., McMullen, P. David, McSheffrey, Gordon G., Mege, Jean-Louis, Merritt, Adam J., Minnick, Michael F., Mitchell, Hazel M., Morrison, Donald, Musser, Kimberlee A., Nagahama, Masahiro, Nagao, Prescilla Emy, Nagy, István, Salomonsson, Emelie Näslund, Nazarian, Elizabeth J., Nichols, Wright W., Noppa, Laila, Octavia, Sophie, Oda, Masataka, Ofek, Itzhak, Oliver, James D., Olson, Patrick D., Omosun, Yusuf, Ong, Edmund, Osta, Rosario, Otero, Andrés, Oyston, Petra C.F., Paris, Daniel H., Patel, Robin, Patrick, Sheila, Pedra, Joao H.F., Posteraro, Brunella, Posteraro, Patrizia, Poxton, Ian R., Pujic, Petar, Raffa, Brittany J., Rakin, Alexander, Ramarao, Nalini, Ramirez, Mario, Ravalison, Miora, Reed, Kurt D., Reglinski, Mark, Richards, Allen L., Riesbeck, Kristian, Riley, Thomas V., Rodríguez-Calleja, José-María, Rodríguez-Nava, Verónica, Rumbaugh, Kendra P., Sanderson, Kenneth E., Sanguinetti, Maurizio, Santos, Jesús A., Santos, Renato L., Schaar, Viveka, Scheld, W. Michael, Schmitz, Jonathan E., Schwartzman, Joseph D., Severo, Maiara S., Sharon, Nathan, Shirtliff, Mark E., Simner, Patricia J., Šmajs, David, Smith, David G.E., Sorokin, Alexei, Sprague, Lisa D., Sriskandan, Shiranee, Stevens, Dennis L., Stratton, Charles W., Strouhal, Michal, Su, Yu Ching, Sussman, Max, Talbot, Elizabeth A., Tang, Le, Tang, Yi-Wei, Taur, Ying, Tessier, Jeffrey M., Textoris, Julien, Thirumalapura, Nagaraja R., Tsuge, Hideaki, Turenne, Christine Y., Valvano, Miguel A., Vázquez-Boland, José A., Verhaegh, Suzanne J.C., Volkan, Ender, Vollmer, Waldemar, Wade, William F., Waites, Ken B., Walker, Alan W., Walker, David H., Wang, Guiqing, Wang, Qinning, Wang, Xin, Ward, Bruce, Watson, Eleanor, Weil, Ana A., Welkos, Susan L., Wen, Zhensong, Wengenack, Nancy L., Westblade, Lars F., Wexler, Hannah M., Wren, Brendan W., Wu, Min, Wu, Shangwei, Wu, Weihui, Xiao, Li, Zhang, Jing-Ren, Zhao, Zuotao, Zhong, Guangming

Source: In Molecular Medical Microbiology Edition: Second Edition. 2015:xiii-xviii

Gains and Losses in Yersinia enterocolitica subsp. palearctica Genomes.

Authors: Rakin, Alexander, Batzilla, Julia, Garzetti, Debora, Heesemann, Jürgen

Source: Advances in Yersinia Research; 2012, p23-29, 7p

Unique Activity Spectrum of Colicin FY: All 110 Characterized Yersinia enterocolitica Isolates Were Colicin FY Susceptible.

Authors: Bosák, Juraj, Micenková, Lenka, Vrba, Martin, Ševčíková, Alena, Dědičová, Daniela, Garzetti, Debora, Šmajs, David

Source: PLoS ONE; Dec2013, Vol. 8 Issue 12, p1-7, 7p

Subject Terms: COLICINS, YERSINIA enterocolitica, PLASMIDS, MEMBRANE proteins, MICROBIAL sensitivity tests, RIBOSOMAL RNA, ANTIBIOTICS

Erratum: CD40-signalling abrogates induction of RORγt⁺ Treg cells by intestinal CD103⁺ DCs and causes fatal colitis.

Authors: Barthels, Christian, Ogrinc, Ana, Steyer, Verena, Meier, Stefanie, Simon, Ferdinand, Wimmer, Maria, Blutke, Andreas, Straub, Tobias, Zimber-Strobl, Ursula, Lutgens, Esther, Marconi, Peggy, Ohnmacht, Caspar, Garzetti, Debora, Stecher, Bärbel, Brocker, Thomas

Source: Nature Communications; Apr2017, Vol. 8 Issue 4, p15439, 1p