Therapeutic algebra of immunomodulatory drug responses at single-cell resolution

Authors: Jiang, Jialong, Chen, Sisi, Tsou, Tiffany, McGinnis, Christopher S., Khazaei, Tahmineh, Zhu, Qin, Park, Jong H., Rivaud, Paul, Strazhnik, Inna-Marie, Chow, Eric D., Sivak, David A., Gartner, Zev J., Thomson, Matt

Subject Terms: Quantitative Biology - Genomics

Access URL: http://arxiv.org/abs/2208.10661

Patterning and folding of intestinal villi by active mesenchymal dewetting

Authors: Huycke, Tyler R., Häkkinen, Teemu J., Miyazaki, Hikaru, Srivastava, Vasudha, Barruet, Emilie, McGinnis, Christopher S., Kalantari, Ali, Cornwall-Scoones, Jake, Vaka, Dedeepya, Zhu, Qin, Jo, Hyunil, Oria, Roger, Weaver, Valerie M., DeGrado, William F., Thomson, Matt, Garikipati, Krishna, Boffelli, Dario, Klein, Ophir D., Gartner, Zev J.

Source: In Cell 6 June 2024 187(12):3072-3089

Programming the Self-Organization of Endothelial Cells into Perfusable Microvasculature

Authors: Cabral, Katelyn A., Srivastava, Vasudha, Graham, Austin J., Coyle, Maxwell C., Stashko, Connor, Weaver, Valerie, Gartner, Zev J.

Source: Tissue engineering.Part A. 29(3/4):80-92

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100176120090.0x000001&indx=1&recIds=ETOCvdc_100176120090.0x000001

Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia

Authors: Su-Feher, Linda, Rubin, Anna N., Silberberg, Shanni N., Catta-Preta, Rinaldo, Lim, Kenneth J., Ypsilanti, Athena R., Zdilar, Iva, McGinnis, Christopher S., McKinsey, Gabriel L., Rubino, Thomas E., Hawrylycz, Michael J., Thompson, Carol, Gartner, Zev J., Puelles, Luis, Zeng, Hongkui, Rubenstein, John L. R., Nord, Alex S.

Source: Proceedings of the National Academy of Sciences of the United States of America, 2022 Apr 01. 119(15), 1-12.

Access URL: https://www.jstor.org/stable/27151796

Bisphenol A replacement chemicals, BPF and BPS, induce protumorigenic changes in human mammary gland organoid morphology and proteome

Authors: Winkler, Juliane, Liu, Pengyuan, Phong, Kiet, Hinrichs, Johanna H., Ataii, Nassim, Williams, Katherine, Hadler-Olsen, Elin, Samson, Susan, Gartner, Zev J., Fisher, Susan, Werb, Zena

Source: Proceedings of the National Academy of Sciences of the United States of America, 2022 Mar . 119(11), 1-10.

Access URL: https://www.jstor.org/stable/27150973

Single-Cell Protein Profiling by Microdroplet Barcoding and Next-Generation Sequencing

Authors: Kim, Samuel C., Haliburton, John R., Gartner, Zev J., Abate, Adam R.

Source: Methods in molecular biology. 2386:101-112

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN628034290&indx=1&recIds=ETOCRN628034290

A reductionist approach to determine the effect of cell-cell contact on human epidermal stem cell differentiation

Authors: Louis, Blaise, Tewary, Mukul, Bremer, Andrew W., Philippeos, Christina, Negri, Victor A., Zijl, Sebastiaan, Gartner, Zev J., Schaffer, David V., Watt, Fiona M.

Source: Acta biomaterialia. 150:265-276

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100178296080.0x000001&indx=1&recIds=ETOCvdc_100178296080.0x000001

Mapping hormone-regulated cell-cell interaction networks in the human breast at single-cell resolution

Authors: Murrow, Lyndsay M., Weber, Robert J., Caruso, Joseph A., McGinnis, Christopher S., Phong, Kiet, Gascard, Philippe, Rabadam, Gabrielle, Borowsky, Alexander D., Desai, Tejal A., Thomson, Matthew, Tlsty, Thea, Gartner, Zev J.

Source: In Cell Systems 17 August 2022 13(8):644-664

Systematically quantifying morphological features reveals constraints on organoid phenotypes

Authors: Beck, Lauren E., Lee, Jasmine, Coté, Christopher, Dunagin, Margaret C., Lukonin, Ilya, Salla, Nikkita, Chang, Marcello K., Hughes, Alex J., Mornin, Joseph D., Gartner, Zev J., Liberali, Prisca, Raj, Arjun

Source: In Cell Systems 20 July 2022 13(7):547-560

Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution

Authors: Yang, Dian, Jones, Matthew G., Naranjo, Santiago, Rideout, William M., III, Min, Kyung Hoi (Joseph), Ho, Raymond, Wu, Wei, Replogle, Joseph M., Page, Jennifer L., Quinn, Jeffrey J., Horns, Felix, Qiu, Xiaojie, Chen, Michael Z., Freed-Pastor, William A., McGinnis, Christopher S., Patterson, David M., Gartner, Zev J., Chow, Eric D., Bivona, Trever G., Chan, Michelle M., Yosef, Nir, Jacks, Tyler, Weissman, Jonathan S.

Source: In Cell 26 May 2022 185(11):1905-1923

Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids

Authors: Popova, Galina, Soliman, Sarah S., Kim, Chang N., Keefe, Matthew G., Hennick, Kelsey M., Jain, Samhita, Li, Tao, Tejera, Dario, Shin, David, Chhun, Bryant B., McGinnis, Christopher S., Speir, Matthew, Gartner, Zev J., Mehta, Shalin B., Haeussler, Maximilian, Hengen, Keith B., Ransohoff, Richard R., Piao, Xianhua, Nowakowski, Tomasz J.

Source: In Cell Stem Cell 2 December 2021 28(12):2153-2166

Expanding the boundaries of synthetic development

Authors: Martyn, Iain, Gartner, Zev J.

Source: In Developmental Biology June 2021 474:62-70

Organoid models for mammary gland dynamics and breast cancer

Authors: Srivastava, Vasudha, Huycke, Tyler R., Phong, Kiet T., Gartner, Zev J.

Source: In Current Opinion in Cell Biology October 2020 66:51-58

Balancing Act: Cell Polarity and Shape Compete to Ensure Robust Development

Authors: Murrow, Lyndsay M., Gartner, Zev J.

Source: In Developmental Cell 2 December 2019 51(5):545-547

Paracrine costimulation of IFN-γ signaling by integrins modulates CD8 T cell differentiation

Authors: Krummel, Matthew F., Mahale, Jagdish N., Uhl, Lion F. K., Hardison, Emily A., Mujal, Adriana M., Mazet, Julie M., Weber, Robert J., Gartner, Zev J., Gérard, Audrey

Source: Proceedings of the National Academy of Sciences of the United States of America, 2018 Nov 01. 115(45), 11585-11590.

Access URL: https://www.jstor.org/stable/26563186

Engineered Tissue Folding by Mechanical Compaction of the Mesenchyme

Authors: Hughes, Alex J., Miyazaki, Hikaru, Coyle, Maxwell C., Zhang, Jesse, Laurie, Matthew T., Chu, Daniel, Vavrušová, Zuzana, Schneider, Richard A., Klein, Ophir D., Gartner, Zev J.

Source: In Developmental Cell 22 January 2018 44(2):165-178

DNA-Templated Organic Synthesis and Selection of a Library of Macrocycles

Authors: Gartner, Zev J., Tse, Brian N., Grubina, Rozalina, Doyon, Jeffrey B., Snyder, Thomas M., Liu, David R.

Source: Science, 2004 Sep 01. 305(5690), 1601-1605.

Access URL: https://www.jstor.org/stable/3837918

Directed Evolution of Ligand Dependence: Small-Molecule-Activated Protein Splicing

Authors: Buskirk, Allen R., Ong, Yi-Ching, Gartner, Zev J., Liu, David R., Szostak, Jack W.

Source: Proceedings of the National Academy of Sciences of the United States of America, 2004 Jul . 101(29), 10505-10510.

Access URL: https://www.jstor.org/stable/3372688

Printed droplet microfluidics for on demand dispensing of picoliter droplets and cells

Authors: Cole, Russell H., Tang, Shi-Yang, Siltanen, Christian A., Shahi, Payam, Zhang, Jesse Q., Poust, Sean, Gartner, Zev J., Abate, Adam R.

Source: Proceedings of the National Academy of Sciences of the United States of America, 2017 Aug . 114(33), 8728-8733.

Access URL: https://www.jstor.org/stable/26487033

Non-autonomous cell proliferation in the mammary gland and cancer

Authors: Weber, Robert J, Desai, Tejal A, Gartner, Zev J

Source: In Current Opinion in Cell Biology April 2017 45:55-61