Fermentation process of tobacco leaves drives the specific changes of microbial community

Authors: Jiemeng Tao, Shanyi Chen, Zhenkun Jiang, Chen Wang, Enren Zhang, Hui Liang, Yalong Xu, Peijian Cao, Ning Ding, Mingqian Zhang, Wei He, Qiansi Chen

Source: BMC Microbiology, Vol 24, Iss 1, Pp 1-12 (2024)

Subject Terms: Plant fermentation, Tobacco leaves, Microbial community, Co-occurrence network, Functional profiles, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/72c8520ee78c45caa152ca15de619578

Bacterial functional responses to environmental variability: a case study in three distinct mountain lakes within a single watershed

Authors: Silvena Boteva, Marieta Stanachkova, Ivan Traykov, Boyanka Angelova, Anelia Kenarova

Source: Biotechnology & Biotechnological Equipment, Vol 38, Iss 1 (2024)

Subject Terms: Aquatic bacteria, mountain lakes, bacterial metabolic activity, bacterial functional profiles, bacterial functional diversity, Biotechnology, TP248.13-248.65

File Description: electronic resource

Relation: https://doaj.org/toc/1310-2818; https://doaj.org/toc/1314-3530

Access URL: https://doaj.org/article/64dd34421d9a4ee284840244810f9a0c

Impaired Mycobacterium tuberculosis-specific T-cell memory phenotypes and functional profiles among adults with type 2 diabetes mellitus in Uganda

Authors: Phillip Ssekamatte, Rose Nabatanzi, Diana Sitenda, Marjorie Nakibuule, Bernard Ssentalo Bagaya, Davis Kibirige, Andrew Peter Kyazze, David Patrick Kateete, Obondo James Sande, Reinout van Crevel, Stephen Cose, Irene Andia Biraro

Source: Frontiers in Immunology, Vol 15 (2024)

Subject Terms: latent tuberculosis infection, diabetes mellitus, T cells, memory phenotypes, functional profiles, Immunologic diseases. Allergy, RC581-607

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fimmu.2024.1480739/full; https://doaj.org/toc/1664-3224

Access URL: https://doaj.org/article/066153b377554ff38f344ec645014379

Bacterial and archaeal community successions in high-salinity groundwater and their potential impact on arsenic cycling

Authors: Zhi, Chuanshun ^a, Hu, Xiaonong ^{a, ⁎}, Zhang, Zhuo ^b, He, Baonan ^c, Bai, Jing ^a, Wu, Xiancang ^a, Mu, Hui ^a, Chang, Wenbo ^a, Yang, Fan ^a, Qiu, Qi ^a, Wang, Yuzheng ^a

Source: In Journal of Hydrology June 2025 653

Unveiling associations between heavy metals and bacterial functional assembly under the impact of Spartina alterniflora invasion in the Yellow River Delta wetland

Authors: Liu, Ying ^{a, b, 1}, Song, Zenglei ^{c, 1}, Zhang, Haikun ^b, Sun, Yanyu ^b, Hu, Xiaoke ^{b, ⁎}, Wang, Caixia ^{a, ⁎}

Source: In Environmental Technology & Innovation May 2025 38

The Comparative Genome Dashboard

Authors: Suzanne Paley, Ron Caspi, Paul O'Maille, Peter D. Karp

Source: Frontiers in Microbiology, Vol 15 (2024)

Subject Terms: comparative genomics, functional traits, microbial genome, inference of metabolic capabilities, comparative functional profiles, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2024.1447632/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/9a1f0cb9d75c41b782d3650ce1289061

Nitrogen functional profiles of microbiomes in diverse agricultural and forest soils and its driver at continental scale in China

Authors: Yongpeng Zhao, Shuling Wang, Kai Cai, Zhihui Wang, Alan L. Wright, Xianjun Jiang

Source: Ecological Indicators, Vol 163, Iss , Pp 112087- (2024)

Subject Terms: Metagenomic, Nitrogen cycling, Functional profiles, Terrestrial ecosystem, Soil pH, Ecology, QH540-549.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1470160X24005442; https://doaj.org/toc/1470-160X

Access URL: https://doaj.org/article/6e9b2005f2f54526af345f6d06078ce0

Microbial community assembly and functional profiles along the soil-root continuum of salt-tolerant Suaeda glauca and Suaeda salsa

Authors: Luyao Tang, Le Zhan, Yanan Han, Zhengran Wang, Lei Dong, Zhong Zhang

Source: Frontiers in Plant Science, Vol 14 (2023)

Subject Terms: community assembly, functional profiles, microbiomes, salt stress, Suaeda, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpls.2023.1301117/full; https://doaj.org/toc/1664-462X

Access URL: https://doaj.org/article/816060c93b7a49f0a840a05a19ad10d1

Heat stress impacts the multi-domain ruminal microbiota and some of the functional features independent of its effect on feed intake in lactating dairy cows

Authors: Tansol Park, Lu Ma, Shengtao Gao, Dengpan Bu, Zhongtang Yu

Source: Journal of Animal Science and Biotechnology, Vol 13, Iss 1, Pp 1-15 (2022)

Subject Terms: Functional profiles, Heat stress, Microbiome, Multi-kingdom, Network analysis, Ruminal microbiota, Animal culture, SF1-1100, Veterinary medicine, SF600-1100

File Description: electronic resource

Relation: https://doaj.org/toc/2049-1891

Access URL: https://doaj.org/article/e78269d92a024fa5ad20e8c615dbff78

Microbial communities associated with Zoea-2 syndrome and White feces syndrome in P. vannamei farming

Authors: Sathish Kumar Thangaraj, Suganya Panjan Nathamuni, Vinaya Kumar Katneni, Ashok Kumar Jangam, Satheesha Avunje, Devika Neelakantan Thulasi, Monendra Grover, Jesudhas Raymond Jani Angel, Mudagandur Shashi Shekhar

Source: Frontiers in Marine Science, Vol 10 (2023)

Subject Terms: Zoea-2 syndrome, white feces syndrome, metagenomics, pacific white shrimp, taxonomic profiles, functional profiles, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2023.1120004/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/e825853c5954460b94116fc76f92e308

Alterations and Prediction of Functional Profiles of Gut Microbiota After Fecal Microbiota Transplantation for Iranian Recurrent Clostridioides difficile Infection with Underlying Inflammatory Bowel Disease: A Pilot Study

Authors: Azimirad M, Jo Y, Kim MS, Jeong M, Shahrokh S, Aghdaei HA, Zali MR, Lee S, Yadegar A, Shin JH

Source: Journal of Inflammation Research, Vol Volume 15, Pp 105-116 (2022)

Subject Terms: fecal microbiota transplantation, clostridioides difficile infection, inflammatory bowel disease, gut microbiome, functional profiles, gut dysbiosis, Pathology, RB1-214, Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: https://www.dovepress.com/alterations-and-prediction-of-functional-profiles-of-gut-microbiota-af-peer-reviewed-fulltext-article-JIR; https://doaj.org/toc/1178-7031

Access URL: https://doaj.org/article/d86f3e8fe49e439cafcb5f9b4e1aa4f1

Modelling of Functional Profiles and Explainable Shape Shifts Detection: An Approach Combining the Notion of the Fréchet Mean with the Shape-Invariant Model

Authors: Georgios I. Papayiannis, Stelios Psarakis, Athanasios N. Yannacopoulos

Source: Mathematics, Vol 11, Iss 21, p 4466 (2023)

Subject Terms: environmental modelling, EWMA control charts, Fréchet mean, functional profiles, shape-invariant model, shift detection, Mathematics, QA1-939

File Description: electronic resource

Relation: https://www.mdpi.com/2227-7390/11/21/4466; https://doaj.org/toc/2227-7390

Access URL: https://doaj.org/article/236c692732f24590b318cf37cdf414ad

The bacterial community composition and its environmental drivers in the rivers around eutrophic Chaohu Lake, China

Authors: Keqiang Shao, Xin Yao, Zhaoshi Wu, Xingyu Jiang, Yang Hu, Xiangming Tang, Qiujin Xu, Guang Gao

Source: BMC Microbiology, Vol 21, Iss 1, Pp 1-11 (2021)

Subject Terms: Lake Chaohu, River, Bacterial community composition, Functional profiles, CODMn, NH4 +, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/3b443e6b421747c2b4d51d8fb324c43c

Crop-type-driven changes in polyphenols regulate soil nutrient availability and soil microbiota

Authors: Dongmei Fan, Zhumeng Zhao, Yu Wang, Junhui Ma, Xiaochang Wang

Source: Frontiers in Microbiology, Vol 13 (2022)

Subject Terms: continuous cropping, rotation, polyphenols, soil microorganism, functional profiles, tea, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.964039/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/e690890e1fbc48efb94903a25d0dda13

Changes in the fermentation products, taxonomic and functional profiles of microbiota during high-moisture sweet sorghum silage fermentation

Authors: Jie Zhao, Xue-Jing Yin, Si-Ran Wang, Jun-Feng Li, Zhi-Hao Dong, Tao Shao

Source: Frontiers in Microbiology, Vol 13 (2022)

Subject Terms: sweet sorghum, fermentation quality, microbial community, functional profiles, silage, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.967624/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/f9de9e7620324f54b1bfe4e8983c9fe7

Dietary energy sources and levels shift the multi-kingdom microbiota and functions in the rumen of lactating dairy cows

Authors: Tansol Park, Lu Ma, Ying Ma, Xiaoqiao Zhou, Dengpan Bu, Zhongtang Yu

Source: Journal of Animal Science and Biotechnology, Vol 11, Iss 1, Pp 1-16 (2020)

Subject Terms: Corn processing method, Dietary energy level, Functional profiles, Multi-kingdom, Rumen microbiota, Animal culture, SF1-1100, Veterinary medicine, SF600-1100

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s40104-020-00461-2; https://doaj.org/toc/2049-1891

Access URL: https://doaj.org/article/b2097ae4c12b496594a109224e18cc62

Bacterial communities’ taxonomic and functional turnovers both accurately predict marine benthic ecological quality status

Authors: Tristan Cordier

Source: Environmental DNA, Vol 2, Iss 2, Pp 175-183 (2020)

Subject Terms: bacteria, benthic monitoring, biotic indices, environmental DNA, functional profiles, supervised machine learning, Environmental sciences, GE1-350, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2637-4943

Access URL: https://doaj.org/article/12dbee960d004626afc7086f89784182

Age-Associated Changes of Nasal Bacterial Microbiome in Patients With Chronic Rhinosinusitis

Authors: Fang Chen, Wenxiang Gao, Chaosheng Yu, Junzheng Li, Feng Yu, Meng Xia, Jiajian Liang, Jianbo Shi, Yinyan Lai

Source: Frontiers in Cellular and Infection Microbiology, Vol 12 (2022)

Subject Terms: chronic rhinosinusitis, microbiota, 16S rDNA, bacterial composition, predicted functional profiles, metabolic pathway, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcimb.2022.786481/full; https://doaj.org/toc/2235-2988

Access URL: https://doaj.org/article/be6d3c8bd6324eb5adde46497fdc58cd

Functional and Taxonomic Effects of Organic Amendments on the Restoration of Semiarid Quarry Soils

Authors: Isabel Miralles, Raúl Ortega, André M. Comeau

Source: mSystems, Vol 6, Iss 6 (2021)

Subject Terms: shotgun metagenomics, functional profiles, bacterial taxonomy, soil restoration, sewage sludge, compost, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2379-5077

Access URL: https://doaj.org/article/4213aa7a7d594dd489e7e6310f576210

Effects of rhizoma peanut cultivars (Arachis glabrata Benth.) on the soil bacterial diversity and predicted function in nitrogen fixation

Authors: Xiao‐Bo Wang, Chih‐Ming Hsu, José C. B. Dubeux Jr., Cheryl Mackowiak, Ann Blount, Xing‐Guo Han, Hui‐Ling Liao

Source: Ecology and Evolution, Vol 9, Iss 22, Pp 12676-12687 (2019)

Subject Terms: bacterial diversity, biological nitrogen fixation, functional profiles, grasslands, soil microorganisms, Ecology, QH540-549.5

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7758

Access URL: https://doaj.org/article/9dc48325aea04384af156c5f17f4e36d