A nationwide comprehensive genomic profiling and molecular tumor board platform for patients with advanced cancer

Authors: Pieter-Jan Volders, Philippe Aftimos, Franceska Dedeurwaerdere, Geert Martens, Jean-Luc Canon, Gabriela Beniuga, Guy Froyen, Jacques Van Huysse, Rebecca De Pauw, Hans Prenen, Suzan Lambin, Lore Decoster, Freya Vaeyens, Sylvie Rottey, Pieter-Jan Van Dam, Lynn Decoster, Annemie Rutten, Max Schreuer, Siebe Loontiens, Joni Van der Meulen, Jeroen Mebis, Kristof Cuppens, Sabine Tejpar, Isabelle Vanden Bempt, Jacques De Grève, David Schröder, Cédric van Marcke, Marc Van Den Bulcke, Evandro de Azambuja, Kevin Punie, Brigitte Maes

Source: npj Precision Oncology, Vol 9, Iss 1, Pp 1-9 (2025)

Subject Terms: Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2397-768X

Access URL: https://doaj.org/article/e6c17c983f4e45489f70ec83d55744f2

DeltaMSI: artificial intelligence-based modeling of microsatellite instability scoring on next-generation sequencing data

Authors: Koen Swaerts, Franceska Dedeurwaerdere, Dieter De Smet, Peter De Jaeger, Geert A. Martens

Source: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-14 (2023)

Subject Terms: Microsatellite instability, Indel length distribution analysis, DNA mismatch repair deficiency, Targeted resequencing, Immunotherapy, Logistic regression, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2105

Access URL: https://doaj.org/article/1d4a595a18144849bd933c0cabba752f

Inter‐observer agreement for the histological diagnosis of invasive lobular breast carcinoma

Authors: Matthias Christgen, Leonie Donata Kandt, Wiebke Antonopoulos, Stephan Bartels, Mieke R VanBockstal, Martin Bredt, Maria Jose Brito, Henriette Christgen, Cecile Colpaert, Bálint Cserni, Gábor Cserni, Maximilian E Daemmrich, Raihanatou Danebrock, Franceska Dedeurwaerdere, Carolien HM vanDeurzen, Ramona Erber, Christine Fathke, Henning Feist, Maryse Fiche, Claudia Aura Gonzalez, Natalie D terHoeve, Loes Kooreman, Till Krech, Glen Kristiansen, Janina Kulka, Florian Laenger, Marcel Lafos, Ulrich Lehmann, Maria Dolores Martin‐Martinez, Sophie Mueller, Enrico Pelz, Mieke Raap, Alberto Ravarino, Tanja Reineke‐Plaass, Nora Schaumann, Anne‐Marie Schelfhout, Maxim DeSchepper, Jerome Schlue, Koen Van de Vijver, Wim Waelput, Axel Wellmann, Monika Graeser, Oleg Gluz, Sherko Kuemmel, Ulrike Nitz, Nadia Harbeck, Christine Desmedt, Giuseppe Floris, Patrick WB Derksen, Paul J vanDiest, Anne Vincent‐Salomon, Hans Kreipe

Source: The Journal of Pathology: Clinical Research, Vol 8, Iss 2, Pp 191-205 (2022)

Subject Terms: lobular breast carcinoma, diagnosis, quality assurance, beta‐catenin, p120‐catenin, tubular elements, Pathology, RB1-214

File Description: electronic resource

Relation: https://doaj.org/toc/2056-4538

Access URL: https://doaj.org/article/315199064a574f7f8e979a65ce71d4f6

Comparison of microsatellite instability detection by immunohistochemistry and molecular techniques in colorectal and endometrial cancer

Authors: Franceska Dedeurwaerdere, Kathleen BM Claes, Jo Van Dorpe, Isabelle Rottiers, Joni Van der Meulen, Joke Breyne, Koen Swaerts, Geert Martens

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-15 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/0e513393128942018dcc7c80a00264c0

Shallow whole-genome sequencing of plasma cell-free DNA accurately differentiates small from non-small cell lung carcinoma

Authors: Lennart Raman, Malaïka Van der Linden, Kim Van der Eecken, Karim Vermaelen, Ingel Demedts, Veerle Surmont, Ulrike Himpe, Franceska Dedeurwaerdere, Liesbeth Ferdinande, Yolande Lievens, Kathleen Claes, Björn Menten, Jo Van Dorpe

Source: Genome Medicine, Vol 12, Iss 1, Pp 1-12 (2020)

Subject Terms: Lung cancer, Liquid biopsy, Cell-free DNA, Shallow whole-genome sequencing, Copy number alterations, Histological classification, Medicine, Genetics, QH426-470

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s13073-020-00735-4; https://doaj.org/toc/1756-994X

Access URL: https://doaj.org/article/63038e3790a042e2aee27203f717ee9e

Successful Multimodal Therapy with Intracerebral Liposomal Amphotericin B and Systemic High-Dose Isavuconazole in Proven Disseminated Aspergillosis

Authors: Simon Feys, Franceska Dedeurwaerdere, Katrien Lagrou, Jeroen Van Lerbeirghe, Dries Deeren

Source: Journal of Fungi, Vol 9, Iss 3, p 327 (2023)

Subject Terms: aspergillosis, cerebral aspergillosis, Aspergillus empyema, amphotericin B, isavuconazole, Aspergillus flavus, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.mdpi.com/2309-608X/9/3/327; https://doaj.org/toc/2309-608X

Access URL: https://doaj.org/article/955b5d1ef0404234a8a8a7e01f98d42f

Shallow-depth sequencing of cell-free DNA for Hodgkin and diffuse large B-cell lymphoma (differential) diagnosis: a standardized approach with underappreciated potential

Authors: Lennart Raman, Malaïka Van der Linden, Ciel De Vriendt, Bliede Van den Broeck, Kristoff Muylle, Dries Deeren, Franceska Dedeurwaerdere, Sofie Verbeke, Amélie Dendooven, Katrien De Grove, Saskia Baert, Kathleen Claes, Björn Menten, Fritz Offner, Jo Van Dorpe

Source: Haematologica, Vol 107, Iss 1 (2020)

Subject Terms: Diseases of the blood and blood-forming organs, RC633-647.5

File Description: electronic resource

Relation: https://haematologica.org/article/view/10113; https://doaj.org/toc/0390-6078; https://doaj.org/toc/1592-8721

Access URL: https://doaj.org/article/96b66b2db00e49dbb2dbc33814abdc77