Strengthening global-change science by integrating aeDNA with paleoecoinformatics

Authors: Alsos, Inger Greve, Bowler, Chris, Coolen, Marco J.L., Cullen, Nicola, Crump, Sarah, Epp, Laura Saskia, Fernandez-Guerra, Antonio, Grimm, Eric, Herzschuh, Ulrike, Mereghetti, Alessandro, Meyer, Rachel Sarah, Nota, Kevin, Pedersen, Mikkel Winther, Pérez, Vilma, Shapiro, Beth, Stoof-Leichsenring, Kathleen R., Wood, Jamie, Williams, John W., Spanbauer, Trisha L., Heintzman, Peter D., Blois, Jessica, Capo, Eric, Goring, Simon J., Monchamp, Marie-Eve, Parducci, Laura, Von Eggers, Jordan M.

Source: In Trends in Ecology & Evolution October 2023 38(10):946-960

Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

Authors: Sunagawa, Shinichi, Acinas, Silvia G., Bork, Peer, Karsenti, Eric, Bowler, Chris, Sardet, Christian, Stemmann, Lars, de Vargas, Colomban, Wincker, Patrick, Lescot, Magali, Babin, Marcel, Gorsky, Gabriel, Grimsley, Nigel, Guidi, Lionel, Hingamp, Pascal, Jaillon, Olivier, Kandels, Stefanie, Iudicone, Daniele, Ogata, Hiroyuki, Pesant, Stéphane, Sullivan, Matthew B., Not, Fabrice, Lee, Karp-Boss, Boss, Emmanuel, Cochrane, Guy, Follows, Michael, Poulton, Nicole, Raes, Jeroen, Sieracki, Mike, Speich, Sabrina, Delmont, Tom O., Gaia, Morgan, Hinsinger, Damien D., Frémont, Paul, Vanni, Chiara, Fernandez-Guerra, Antonio, Eren, A. Murat, Kourlaiev, Artem, d'Agata, Leo, Clayssen, Quentin, Villar, Emilie, Labadie, Karine, Cruaud, Corinne, Poulain, Julie, Da Silva, Corinne, Wessner, Marc, Noel, Benjamin, Aury, Jean-Marc, Pelletier, Eric

Source: In Cell Genomics 11 May 2022 2(5)

Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics

Authors: Bergauer, Kristin, Fernandez-Guerra, Antonio, Garcia, Juan A. L., Sprenger, Richard R., Stepanauskas, Ramunas, Pachiadaki, Maria G., Jensen, Ole N., Herndl, Gerhard J.

Source: Proceedings of the National Academy of Sciences of the United States of America, 2018 Jan . 115(3), E400-E408.

Access URL: https://www.jstor.org/stable/26506401

Genomic adaptation of giant viruses in polar oceans.

Authors: Meng, Lingjie, Delmont, Tom O., Gaïa, Morgan, Pelletier, Eric, Fernàndez-Guerra, Antonio, Chaffron, Samuel, Neches, Russell Y., Wu, Junyi, Kaneko, Hiroto, Endo, Hisashi, Ogata, Hiroyuki

Source: Nature Communications; 10/12/2023, Vol. 14 Issue 1, p1-12, 12p

Subject Terms: VIRAL genomes, OCEAN, VIRAL genes, TUNDRAS, DNA viruses, BIOGEOGRAPHY, COLD adaptation, EUKARYOTES

Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems.

Authors: Richter, Daniel J., Watteaux, Romain, Vannier, Thomas, Leconte, Jade, Frémont, Paul, Reygondeau, Gabriel, Maillet, Nicolas, Henry, Nicolas, Benoit, Gaëtan, Da Silva, Ophélie, Delmont, Tom O., Fernàndez-Guerra, Antonio, Suweis, Samir, Narci, Romain, Berney, Cédric, Eveillard, Damien, Gavory, Frederick, Guidi, Lionel, Labadie, Karine, Mahieu, Eric

Source: eLife; 8/3/2022, p1-30, 30p

The genomic repertoire for cell cycle control and DNA metabolism in S. purpuratus

Authors: Fernandez-Guerra, Antonio, Aze, Antoine, Morales, Julia, Mulner-Lorillon, Odile, Cosson, Bertrand, Cormier, Patrick, Bradham, Cynthia, Adams, Nikki, Robertson, Anthony J., Marzluff, William F., Coffman, James A., Genevière, Anne-Marie

Source: In Developmental Biology 2006 300(1):238-251

Patterns and architecture of genomic islands in marine bacteria

Authors: Fernández-Gómez Beatriz, Fernàndez-Guerra Antonio, Casamayor Emilio O, González José M, Pedrós-Alió Carlos, Acinas Silvia G

Source: BMC Genomics, Vol 13, Iss 1, p 347 (2012)

Subject Terms: Genomic islands, Horizontal gene transfer, Homologous recombination, Bacterial core genes, Flexible genome, Structure of genomic islands, Patterns within genomic islands, Marine bacteria, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: http://www.biomedcentral.com/1471-2164/13/347; https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/1eb2c3672a42460fbda4f9414c3abca5

T-RFPred: a nucleotide sequence size prediction tool for microbial community description based on terminal-restriction fragment length polymorphism chromatograms

Authors: Casamayor Emilio O, Mou Xiaozhen, Buchan Alison, Fernàndez-Guerra Antonio, González José M

Source: BMC Microbiology, Vol 10, Iss 1, p 262 (2010)

Subject Terms: Microbiology, QR1-502

File Description: electronic resource

Relation: http://www.biomedcentral.com/1471-2180/10/262; https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/ffe86b2f99714d5bb2f9b78639dfac5a

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

T-RFPred: a nucleotide sequence size prediction tool for microbial community description based on terminal-restriction fragment lengthpolymorphism chromatograms.

Authors: Fernàndez-Guerra, Antonio, Buchan, Alison, Xiaozhen Mou, Casamayor, Emilio O., González, José M.

Source: BMC Microbiology; 2010, Vol. 10, p262-268, 7p

Subject Terms: NUCLEOTIDE analysis, NUCLEIC acids, CYCLIC nucleotides, CHROMOSOME polymorphism, NUCLEOTIDE sequence, NUCLEIC acid analysis