Mechanistic insights into the Orai channel by molecular dynamics simulations

Authors: Bonhenry, Daniel, Schober, Romana, Schmidt, Tony, Waldherr, Linda, Ettrich, Rüdiger H., Schindl, Rainer

Source: In Seminars in Cell and Developmental Biology October 2019 94:50-58

Crystal structure of a novel domain of the motor subunit of the Type I restriction enzyme EcoR124 involved in complex assembly and DNA binding

Authors: Grinkevich, Pavel, Sinha, Dhiraj, Iermak, Iuliia, Guzanova, Alena, Weiserova, Marie, Ludwig, Jost, Mesters, Jeroen R. ^**, Ettrich, Rüdiger H.

Source: In Journal of Biological Chemistry September 2018 293(39):15043-15054

Communication between N terminus and loop2 tunes Orai activation

Authors: Fahrner, Marc, Pandey, Saurabh K., Muik, Martin, Traxler, Lukas, Butorac, Carmen, Stadlbauer, Michael, Zayats, Vasilina, Krizova, Adéla, Plenk, Peter, Frischauf, Irene, Schindl, Rainer, Gruber, Hermann J., Hinterdorfer, Peter, Ettrich, Rüdiger, Romanin, Christoph, Derler, Isabella

Source: In Journal of Biological Chemistry 26 January 2018 293(4):1271-1285

A refined atomic scale model of the Saccharomyces cerevisiae K+-translocation protein Trk1p combined with experimental evidence confirms the role of selectivity filter glycines and other key residues

Authors: Zayats, Vasilina, Stockner, Thomas, Pandey, Saurabh Kumar, Wörz, Katharina, Ettrich, Rüdiger, Ludwig, Jost

Source: In BBA - Biomembranes May 2015 1848(5):1183-1195

Expression, characterization and homology modeling of a novel eukaryotic GH84 β-N-acetylglucosaminidase from Penicillium chrysogenum

Authors: Slámová, Kristýna, Kulik, Natallia, Fiala, Martin, Krejzová-Hofmeisterová, Jana, Ettrich, Rüdiger, Křen, Vladimír

Source: In Protein Expression and Purification March 2014 95:204-210

Structural organization of WrbA in apo- and holoprotein crystals

Authors: Wolfova, Julie, Smatanova, Ivana Kuta, Brynda, Jiri, Mesters, Jeroen R., Lapkouski, Mikalai, Kuty, Michal, Natalello, Antonino, Chatterjee, Neal, Chern, Sy-Yeu, Ebbel, Erin, Ricci, Angela, Grandori, Rita, Ettrich, Rüdiger, Carey, Jannette

Source: In BBA - Proteins and Proteomics 2009 1794(9):1288-1298

A residue of motif III positions the helicase domains of motor subunit HsdR in restriction-modification enzyme EcoR124I

Authors: Sinha, Dhiraj, Bialevich, Vitali, Shamayeva, Katsiaryna, Guzanova, Alena, Sisakova, Alexandra, Csefalvay, Eva, Reha, David, Krejci, Lumir, Carey, Jannette, Weiserova, Marie, Ettrich, Rüdiger

Source: Journal of molecular modeling. 24(7)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100118508663.0x000001&indx=1&recIds=ETOCvdc_100118508663.0x000001

Structure and dynamics of the N-terminal loop of PsbQ from photosystem II of Spinacia oleracea

Authors: Ristvejová, Jaroslava, Kopecký, Vladimír, Jr., Sovová, Žofie, Balsera, Mónica, Arellano, Juan B., Green, Michael, Ettrich, Rüdiger

Source: In Biochemical and Biophysical Research Communications 2006 345(1):287-291

The Hydrogen Bonds between Arg423 and Glu472 and Other Key Residues, Asp443, Ser477, and Pro489, Are Responsible for the Formation and a Different Positioning of TNP-ATP and ATP within the Nucleotide-Binding Site of Na+/K+-ATPase.

Authors: Lánský, Zdeněk, Kubala, Martin, Ettrich, Rüdiger

Source: Biochemistry; July 6 2004, Vol. 43 Issue 26, p8303-8311, 9p

Eight Amino Acids Form the ATP Recognition Site of Na+/K+-ATPase.

Authors: Kubala, Martin, Teisinger, Jan, Ettrich, Rüdiger

Source: Biochemistry; June 3 2003, Vol. 42 Issue 21, p6446-6452, 7p

Hydrolytic and transglycosylation reactions of N-acyl modified substrates catalysed by β- N-acetylhexosaminidases

Authors: Fialová, Pavla, Weignerová, Lenka, Rauvolfová, Jana, Přikrylová, Věra, Pišvejcová, Andrea, Ettrich, Rüdiger, Kuzma, Marek, Sedmera, Petr, Křen, Vladimı́r ^∗

Source: In Tetrahedron 2004 60(3):693-701

ATP-binding is stabilized by a stacking interaction within the binding site of Na +/K +-ATPase

Authors: Hofbauerová, Kateřina, Kopecký, Vladimı́r, Jr., Ettrich, Rüdiger, Kubala, Martin, Teisinger, Jan, Amler, Evžen

Source: In Biochemical and Biophysical Research Communications 2003 306(2):416-420

Structure of human [formula omitted]-acid glycoprotein and its high-affinity binding site

Authors: Kopecký, Vladimı́r, Jr., Ettrich, Rüdiger, Hofbauerová, Kateřina, Baumruk, Vladimı́r

Source: In Biochemical and Biophysical Research Communications 2003 300(1):41-46

Heterologous expression, purification and characterization of nitrilase from Aspergillus niger K10

Authors: Felsberg Jürgen, Cantarella Maria, Slámová Kristýna, Rinágelová Anna, Veselá Alicja B, Šveda Ondřej, Malandra Anna, Benada Oldřich, Kavan Daniel, Vaněk Ondřej, Kulik Natallia, Ettrich Rüdiger, Plíhal Ondřej, Bezouška Karel, Kaplan Ondřej, Dušková Jarmila, Dohnálek Jan, Kotik Michael, Křen Vladimír, Martínková Ludmila

Source: BMC Biotechnology, Vol 11, Iss 1, p 2 (2011)

Subject Terms: Biotechnology, TP248.13-248.65

File Description: electronic resource

Relation: http://www.biomedcentral.com/1472-6750/11/2; https://doaj.org/toc/1472-6750

Access URL: https://doaj.org/article/32809d8c26604d979fd58102f928990c

Phe 475 and Glu 446 but not Ser 445 participate in ATP-binding to the α-subunit of Na +/K +-ATPase

Authors: Kubala, Martin, Hofbauerová, Kateřina, Ettrich, Rüdiger, Kopecký, Vladimı́r, Jr., Krumscheid, Rita, Plášek, Jaromı́r, Teisinger, Jan, Schoner, Wilhelm, Amler, Evžen

Source: In Biochemical and Biophysical Research Communications 2002 297(1):154-159

Structure of the dimeric N-glycosylated form of fungal β-N-acetylhexosaminidase revealed by computer modeling, vibrational spectroscopy, and biochemical studies.

Authors: Ettrich, Rüdiger¹ ettrich@greentech.cz, Kopecký Jr., Vladimír² kopecky@karlov.mff.cuni.cz, Hofbauerová, Kateřina^2,3 hofbauer@biomed.cas.cz, Baumruk, Vladimír² baumruk@karlov.mff.cuni.cz, Novák, Petr³ pnovak@biomed.cas.cz, Pompach, Petr^3,4 pompach@biomed.cas.cz, Man, Petr³ petr.man@ibs.fr, Plíhal, Ondřej³ plihal@biomed.cas.cz, Kutý, Michal¹ kuty@ufb.jcu.cz, Kulik, Natallia¹ kulik@greentech.cz, Sklenář, Jan^3,4 sklenar@biomed.cas.cz, Ryšlavá, Helena⁴ ryslava@centrum.cz, Křen, Vladimír³ kren@biomed.cas.cz, Bezouška, Karel^3,4 bezouska@biomed.cas.cz

Source: BMC Structural Biology. 2007, Vol. 7, p1-14. 14p. 3 Diagrams, 2 Charts, 7 Graphs.

Subject Terms: *DIMERS, *ENZYMES, *GLYCOSYLATION, *COMPUTER simulation, *SPECTRUM analysis, *HYDROLYSIS, *MONOSACCHARIDES

The phosphatase activity of the isolated H4-H5 loop of Na⁺/K⁺ ATPase resides outside its ATP binding site.

Authors: Krumscheid, Rita¹, Ettrich, Rüdiger², Sovová, Zofie², Sušánková, Klára³, Lánský, Zdeněk³, Hofbauerová, Kateřina^3,4, Linnertz, Holger¹, Teisinger, Jan³, Amler, Evžen³, Schoner, Wilhelm¹ wilhelm.schoner@vetmed.uni-giessen.de

Source: European Journal of Biochemistry. Oct2004, Vol. 271 Issue 19, p3923-3936. 14p.

Subject Terms: *ADENOSINE triphosphatase, *STRUCTURAL failures, *IMMUNOGLOBULIN idiotypes, *IMMUNOSPECIFICITY, *ANALYTICAL biochemistry, *PHOSPHATASES, *ESTERASES

Sequential activation of STIM1 links Ca²⁺ with luminal domain unfolding.

Authors: Schober, Romana, Bonhenry, Daniel, Lunz, Victoria, Zhu, Jinhui, Krizova, Adela, Frischauf, Irene, Fahrner, Marc, Zhang, MengQi, Waldherr, Linda, Schmidt, Tony, Derler, Isabella, Stathopulos, Peter B., Romanin, Christoph, Ettrich, Rüdiger H., Schindl, Rainer

Source: Science Signaling; 11/19/2019, Vol. 12 Issue 608, p1-16, 16p

Subject Terms: MOLECULAR dynamics, MUSCLE diseases

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