A Bos taurus sequencing methods benchmark for assembly, haplotyping, and variant calling

Authors: Camille Eché, Carole Iampietro, Clément Birbes, Andreea Dréau, Claire Kuchly, Arnaud Di Franco, Christophe Klopp, Thomas Faraut, Sarah Djebali, Adrien Castinel, Matthias Zytnicki, Erwan Denis, Mekki Boussaha, Cécile Grohs, Didier Boichard, Christine Gaspin, Denis Milan, Cécile Donnadieu

Source: Scientific Data, Vol 10, Iss 1, Pp 1-12 (2023)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2052-4463

Access URL: https://doaj.org/article/7cb91973e3214c2d95ce109fe9d9771d

Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variation detection

Authors: Aurélie Canaguier, Romane Guilbaud, Erwan Denis, Ghislaine Magdelenat, Caroline Belser, Benjamin Istace, Corinne Cruaud, Patrick Wincker, Marie-Christine Le Paslier, Patricia Faivre-Rampant, Valérie Barbe

Source: BMC Genomics, Vol 23, Iss 1, Pp 1-17 (2022)

Subject Terms: Structural variations, Oxford Nanopore technologies, Bionano Genomics optical mapping, High molecular weight DNA, Arabidopsis thaliana, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/373c746965b140e4b5f751577c9c2f6e

Population genomics of apricots unravels domestication history and adaptive events

Authors: Alexis Groppi, Shuo Liu, Amandine Cornille, Stéphane Decroocq, Quynh Trang Bui, David Tricon, Corinne Cruaud, Sandrine Arribat, Caroline Belser, William Marande, Jérôme Salse, Cécile Huneau, Nathalie Rodde, Wassim Rhalloussi, Stéphane Cauet, Benjamin Istace, Erwan Denis, Sébastien Carrère, Jean-Marc Audergon, Guillaume Roch, Patrick Lambert, Tetyana Zhebentyayeva, Wei-Sheng Liu, Olivier Bouchez, Céline Lopez-Roques, Rémy-Félix Serre, Robert Debuchy, Joseph Tran, Patrick Wincker, Xilong Chen, Pierre Pétriacq, Aurélien Barre, Macha Nikolski, Jean-Marc Aury, Albert Glenn Abbott, Tatiana Giraud, Véronique Decroocq

Source: Nature Communications, Vol 12, Iss 1, Pp 1-16 (2021)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/0104f159129445f597c4927ff812917d