Caudal and Thalamic Segregation in White Matter Brain Network Communities in Alzheimer's Disease Population

Authors: Xu, Frederick, Duong-Tran, Duy, Zhao, Yize, Shen, Li

Source: 2024 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI) Biomedical and Health Informatics (BHI), 2024 IEEE EMBS International Conference on. :1-8 Nov, 2024

Relation: 2024 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI)

Advances in RNA secondary structure prediction and RNA modifications: Methods, data, and applications

Authors: Yang, Shu, Pham, Nhat Truong, Li, Ziyang, Baik, Jae Young, Lee, Joseph, Zhai, Tianhua, Yu, Weicheng, Hou, Bojian, Shang, Tianqi, He, Weiqing, Duong-Tran, Duy, Naik, Mayur, Shen, Li

Subject Terms: Quantitative Biology - Biomolecules

Access URL: http://arxiv.org/abs/2501.04056

Accessing the topological properties of human brain functional sub-circuits in Echo State Networks

Authors: Nguyen, Bach, Chen, Tianlong, Yang, Shu, Hou, Bojian, Shen, Li, Duong-Tran, Duy

Subject Terms: Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/2412.14999

Preserving Human Large-Scale Brain Connectivity Fingerprint Identifiability with Random Projections

Authors: Duong-Tran, Duy, Magsino, Mark, Goni, Joaquin, Shen, Li

Source: 2024 IEEE International Symposium on Biomedical Imaging (ISBI) Biomedical Imaging (ISBI), 2024 IEEE International Symposium on. :1-5 May, 2024

Relation: 2024 IEEE International Symposium on Biomedical Imaging (ISBI)

Knowledge-Driven Feature Selection and Engineering for Genotype Data with Large Language Models

Authors: Lee, Joseph, Yang, Shu, Baik, Jae Young, Liu, Xiaoxi, Tan, Zhen, Li, Dawei, Wen, Zixuan, Hou, Bojian, Duong-Tran, Duy, Chen, Tianlong, Shen, Li

Subject Terms: Computer Science - Machine Learning, Computer Science - Computation and Language, Quantitative Biology - Genomics

Access URL: http://arxiv.org/abs/2410.01795

Causality-based Subject and Task Fingerprints using fMRI Time-series Data

Authors: Song, Dachuan, Shen, Li, Duong-Tran, Duy, Wang, Xuan

Subject Terms: Computer Science - Machine Learning, Electrical Engineering and Systems Science - Systems and Control

Access URL: http://arxiv.org/abs/2409.18298

Volume-optimal persistence homological scaffolds of hemodynamic networks covary with MEG theta-alpha aperiodic dynamics

Authors: Nguyen, Nghi, Hou, Tao, Amico, Enrico, Zheng, Jingyi, Huang, Huajun, Kaplan, Alan D., Petri, Giovanni, Goñi, Joaquín, Kaufmann, Ralph, Zhao, Yize, Duong-Tran, Duy, Shen, Li

Subject Terms: Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/2407.05060

Dude: Dual Distribution-Aware Context Prompt Learning For Large Vision-Language Model

Authors: Nguyen, Duy M. H., Le, An T., Nguyen, Trung Q., Diep, Nghiem T., Nguyen, Tai, Duong-Tran, Duy, Peters, Jan, Shen, Li, Niepert, Mathias, Sonntag, Daniel

Subject Terms: Computer Science - Computer Vision and Pattern Recognition

Access URL: http://arxiv.org/abs/2407.04489

A principled framework to assess the information-theoretic fitness of brain functional sub-circuits

Authors: Duong-Tran, Duy, Nguyen, Nghi, Mu, Shizhuo, Chen, Jiong, Bao, Jingxuan, Xu, Frederick, Garai, Sumita, Cadena-Pico, Jose, Kaplan, Alan David, Chen, Tianlong, Zhao, Yize, Shen, Li, Goñi, Joaquín

Subject Terms: Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/2406.18531

Theorizing neuro-induced relationships between cognitive diversity, motivation, grit and academic performance in multidisciplinary engineering education context

Authors: Duong-Tran, Duy, Wei, Siqing, Shen, Li

Subject Terms: Computer Science - Computers and Society

Access URL: http://arxiv.org/abs/2407.17584

DALK: Dynamic Co-Augmentation of LLMs and KG to answer Alzheimer's Disease Questions with Scientific Literature

Authors: Li, Dawei, Yang, Shu, Tan, Zhen, Baik, Jae Young, Yun, Sukwon, Lee, Joseph, Chacko, Aaron, Hou, Bojian, Duong-Tran, Duy, Ding, Ying, Liu, Huan, Shen, Li, Chen, Tianlong

Subject Terms: Computer Science - Computation and Language, Computer Science - Artificial Intelligence

Access URL: http://arxiv.org/abs/2405.04819

Consistency of Graph Theoretical Measurements of Alzheimer’s Disease Fiber Density Connectomes Across Multiple Parcellation Scales

Authors: Xu, Frederick, Garai, Sumita, Duong-Tran, Duy, Saykin, Andrew J., Zhao, Yize, Shen, Li

Source: 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2022 IEEE International Conference on. :1323-1328 Dec, 2022

Relation: 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Tangent functional connectomes uncover more unique phenotypic traits

Authors: Abbas, Kausar, Liu, Mintao, Wang, Michael, Duong-Tran, Duy, Tipnis, Uttara, Amico, Enrico, Kaplan, Alan D., Dzemidzic, Mario, Kareken, David, Ances, Beau M., Harezlak, Jaroslaw, Goñi, Joaquín

Subject Terms: Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/2212.06394

Improving Functional Connectome Fingerprinting with Degree-Normalization

Authors: Chiêm, Benjamin, Abbas, Kausar, Amico, Enrico, Duong-Tran, Duy Anh, Crevecoeur, Frédéric, Goñi, Joaquín

Subject Terms: Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/2011.10079

GEFF: Graph Embedding for Functional Fingerprinting

Authors: Abbas, Kausar, Amico, Enrico, Svaldi, Diana Otero, Tipnis, Uttara, Duong-Tran, Duy Anh, Liu, Mintao, Rajapandian, Meenusree, Harezlak, Jaroslaw, Ances, Beau M., Goñi, Joaquín

Subject Terms: Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/2001.06605

Towards an information theoretical description of communication in brain networks

Authors: Amico, Enrico, Abbas, Kausar, Duong-Tran, Duy Anh, Tipnis, Uttara, Rajapandian, Meenusree, Chumin, Evgeny, Ventresca, Mario, Harezlak, Jaroslaw, Goñi, Joaquín

Subject Terms: Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/1911.02601

Tangent functional connectomes uncover more unique phenotypic traits

Authors: Abbas, Kausar ^{1, 2, 12}, Liu, Mintao ^{1, 2, 12}, Wang, Michael ^{1, 2}, Duong-Tran, Duy ^{3, 4}, Tipnis, Uttara ⁵, Amico, Enrico ^{6, 7}, Kaplan, Alan D. ⁵, Dzemidzic, Mario ⁸, Kareken, David ⁸, Ances, Beau M. ⁹, Harezlak, Jaroslaw ¹⁰, Goñi, Joaquín ^{1, 2, 11, 13, ∗}

Source: In iScience 15 September 2023 26(9)

A morphospace of functional configuration to assess configural breadth based on brain functional networks

Authors: Duong-Tran, Duy, Abbas, Kausar, Amico, Enrico, Corominas-Murtra, Bernat, Dzemidzic, Mario, Kareken, David, Ventresca, Mario, Goñi, Joaquín

Subject Terms: Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/1901.10962

Automated cytometric gating with human-level performance using bivariate segmentation.

Authors: Chen, Jiong, Ionita, Matei, Feng, Yanbo, Lu, Yinfeng, Orzechowski, Patryk, Garai, Sumita, Hassinger, Kenneth, Bao, Jingxuan, Wen, Junhao, Duong-Tran, Duy, Wagenaar, Joost, McKeague, Michelle L., Painter, Mark M., Mathew, Divij, Pattekar, Ajinkya, Meyer, Nuala J., Wherry, E. John, Greenplate, Allison R., Shen, Li

Source: Nature Communications; 2/12/2025, Vol. 16 Issue 1, p1-15, 15p

Subject Terms: IMAGE recognition (Computer vision), FLOW cytometry, IMAGE processing, ARTIFICIAL intelligence, IMAGE segmentation

Genomic regions and candidate genes selected during the breeding of rice in Vietnam

Authors: Higgins, Janet, Santos, Bruno, Khanh, Tran Dang, Trung, Khuat Huu, Duong, Tran Duy, Doai, Nguyen Thi Phuong, Hall, Anthony, Dyer, Sarah, Ham, Le Huy, Caccamo, Mario, Vega, Jose

Source: Evolutionary applications. 15(7):1141-1161

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100156659172.0x000001&indx=1&recIds=ETOCvdc_100156659172.0x000001