Optimising image capture for low-light widefield quantitative fluorescence microscopy

Authors: Peterkovic, Zane, Upadhya, Avinash, Perrella, Christopher, Bajraktarevic, Admir, Gonzalez, Ramses Bautista, Lim, Megan, Dunning, Kylie R, Dholakia, Kishan

Source: APL Photon. 10, 031102 (2025)

Subject Terms: Quantitative Biology - Quantitative Methods, Electrical Engineering and Systems Science - Image and Video Processing

Access URL: http://arxiv.org/abs/2410.19210

Learning algorithms for identification of whisky using portable Raman spectroscopy

Authors: Lee, Kwang Jun, Trowbridge, Alexander C., Bruce, Graham D., Dwapanyin, George O., Dunning, Kylie R., Dholakia, Kishan, Schartner, Erik P.

Subject Terms: Computer Science - Machine Learning, Physics - Data Analysis, Statistics and Probability

Access URL: http://arxiv.org/abs/2309.13087

GM-CSF treatment of frozen bovine sperm improves function, fertilization, and subsequent embryo development

Authors: Whitty, Annie L. ^{a, b}, Kind, Karen L. ^{a, c, b}, Dunning, Kylie R. ^{a, d, b}, McPherson, Nicole O. ^{a, b, e, f, 1, ⁎}, Nottle, Mark B. ^{a, b, 1}

Source: In Theriogenology 15 March 2025 235:46-55

Single-fiber-based probe for combined imaging and pH sensing

Authors: Li, Jiawen, Capon, Patrick K., Horsfall, Aimee J., Yagoub, Suliman, Schartner, Erik P., Khalid, Asma, Kirk, Rodney W., Purdey, Malcolm S., Dunning, Kylie R., McLaughlin, Robert A., Abell, Andrew D.

Source: 2021 IEEE Photonics Conference (IPC) Photonics Conference (IPC),2021 IEEE. :1-2 Oct, 2021

Relation: 2021 IEEE Photonics Conference (IPC)

Learning algorithms for identification of whisky using portable Raman spectroscopy

Authors: Lee, Kwang Jun, Trowbridge, Alexander C., Bruce, Graham D., Dwapanyin, George O., Dunning, Kylie R., Dholakia, Kishan, Schartner, Erik P.

Source: In Current Research in Food Science 2024 8

Non-invasive, label-free optical analysis to detect aneuploidy within the inner cell mass of the preimplantation embryo

Authors: Tan, Tiffany C Y, Mahbub, Saabah B, Campbell, Jared M, Habibalahi, Abbas, Campugan, Carl A, Rose, Ryan D, Chow, Darren J X, Mustafa, Sanam, Goldys, Ewa M, Dunning, Kylie R

Source: Human reproduction. 37(1):14-29

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100138742493.0x000001&indx=1&recIds=ETOCvdc_100138742493.0x000001

Optical imaging of cleavage stage bovine embryos using hyperspectral and confocal approaches reveals metabolic differences between on-time and fast-developing embryos

Authors: Santos Monteiro, Clara Ana, Chow, Darren J.X., Leal, Gabriela Ramos, Tan, Tiffany CY., Reis Ferreira, Ana Maria, Thompson, Jeremy G., Dunning, Kylie R.

Source: In Theriogenology 1 January 2021 159:60-68

It takes a community to conceive: an analysis of the scope, nature and accuracy of online sources of health information for couples trying to conceive

Authors: Kedzior, Sophie G.E., Bianco-Miotto, Tina, Breen, James, Diener, Kerrilyn R., Donnelley, Martin, Dunning, Kylie R., Penno, Megan A.S., Schjenken, John E., Sharkey, David J., Hodyl, Nicolette A., Fullston, Tod, Gardiner, Maria, Brown, Hannah M., Rumbold, Alice R.

Source: In Reproductive Biomedicine & Society Online December 2019 9:48-63

A Bimane‐Based Peptide Staple for Combined Helical Induction and Fluorescent Imaging

Authors: Horsfall, Aimee J., Dunning, Kylie R., Keeling, Kelly L., Scanlon, Denis B., Wegener, Kate L., Abell, Andrew D.

Source: Chembiochem. 21(23):3423-3432

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100110415238.0x000001&indx=1&recIds=ETOCvdc_100110415238.0x000001

Metabolic co-dependence of the oocyte and cumulus cells: essential role in determining oocyte developmental competence

Authors: Richani, Dulama, Dunning, Kylie R, Thompson, Jeremy G, Gilchrist, Robert B

Source: Human reproduction update. 27(1):27-47

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100128204908.0x000001&indx=1&recIds=ETOCvdc_100128204908.0x000001

Viewing early life without labels: optical approaches for imaging the early embryo†

Authors: Chow, Darren J X, Tan, Tiffany C Y, Upadhya, Avinash, Lim, Megan, Dholakia, Kishan, Dunning, Kylie R

Source: Biology of Reproduction; June 2024, Vol. 110 Issue: 6 p1157-1174, 18p

A micro-fabricated device (microICSI) improves porcine blastocyst development and procedural efficiency for both porcine intracytoplasmic sperm injection and human microinjection.

Authors: McLennan, Hanna J., Heinrich, Shauna L., Inge, Megan P., Wallace, Samuel J., Blanch, Adam J., Hails, Llewelyn, O'Connor, John P., Waite, Michael B., McIlfatrick, Stephen, Nottle, Mark B., Dunning, Kylie R., Gardner, David K., Thompson, Jeremy G., Love, Allison K.

Source: Journal of Assisted Reproduction & Genetics; Feb2024, Vol. 41 Issue 2, p297-309, 13p

Subject Terms: INTRACYTOPLASMIC sperm injection, MICROINJECTIONS, BLASTOCYST, LABORATORY management, SETUP time, WORKFLOW management

ADAMTS proteases in fertility

Authors: Russell, Darryl L., Brown, Hannah M., Dunning, Kylie R.

Source: In Matrix Biology May-July 2015 44-46:54-63

Hyperspectral imaging of the early embryo: can it detect chromosome abnormalities and predict IVF success?
Biophotonics Australasia 2019

Authors: Tan, Tiffany C. Y., Campugan, Carl, Mahbub, Saabah B., Campbell, Jared M., Habibalahi, Abbas, Mustafa, Sanam, Goldys, Ewa M., Thompson, Jeremy G., Dunning, Kylie R.

Source: Proceedings of SPIE, the International Society for Optical Engineering. 11202:112020M-112020M-2

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCCN900016222&indx=1&recIds=ETOCCN900016222

High precision pH measurements in biological environments using a portable optical fibre pH sensor
Biophotonics Australasia 2019

Authors: Sylvia, Georgina M., Schartner, Erik P., McLennan, Hanna J., Saini, Avishkar, Dunning, Kylie R., Purdey, Malcolm S., Abell, Andrew D., Thompson, Jeremy G.

Source: Proceedings of SPIE, the International Society for Optical Engineering. 11202:112020F-112020F-2

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCCN900016218&indx=1&recIds=ETOCCN900016218

A biophotonic approach to measure pH in small volumes in vitro: Quantifiable differences in metabolic flux around the cumulus‐oocyte‐complex (COC)

Authors: McLennan, Hanna J., Saini, Avishkar, Sylvia, Georgina M., Schartner, Erik P., Dunning, Kylie R., Purdey, Malcolm S., Monro, Tanya M., Abell, Andrew D., Thompson, Jeremy G.

Source: Journal of biophotonics. 13(3)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100103377629.0x000001&indx=1&recIds=ETOCvdc_100103377629.0x000001

Utilization of endogenous fatty acid stores for energy production in bovine preimplantation embryos

Authors: Sutton-McDowall, Melanie L., Feil, Deanne, Robker, Rebecca L., Thompson, Jeremy G., Dunning, Kylie R.

Source: In Theriogenology May 2012 77(8):1632-1641

Nano-liter perfusion microfluidic device made entirely by two-photon polymerization for dynamic cell culture with easy cell recovery.

Authors: McLennan, Hanna J., Blanch, Adam J., Wallace, Samuel J., Ritter, Lesley J., Heinrich, Shauna L., Gardner, David K., Dunning, Kylie R., Gauvin, Marty J., Love, Allison K., Thompson, Jeremy G.

Source: Scientific Reports; 1/11/2023, Vol. 13 Issue 1, p1-16, 16p

Subject Terms: MICROFLUIDIC devices, CELL culture, COMPUTATIONAL fluid dynamics, FLUIDIC devices, CYTOLOGY, CELL growth

Experimentally unsupervised deconvolution for light-sheet microscopy with propagation-invariant beams.

Authors: Wijesinghe, Philip¹, pw64@st-andrews.ac.uk, Corsetti, Stella¹, Chow, Darren J. X.^2,3,4, Sakata, Shuzo⁵, Dunning, Kylie R.^2,3,4, Dholakia, Kishan^1,6,7, kd1@st-andrews.ac.uk

Source: Light: Science & Applications; 11/2/2022, Vol. 11 Issue 1, p1-15, 15p

Vitrification within a nanoliter volume: oocyte and embryo cryopreservation within a 3D photopolymerized device.

Authors: Yagoub, Suliman H., Lim, Megan, Tan, Tiffany C. Y., Chow, Darren J. X., Dholakia, Kishan, Gibson, Brant C., Thompson, Jeremy G., Dunning, Kylie R.

Source: Journal of Assisted Reproduction & Genetics; Sep2022, Vol. 39 Issue 9, p1997-2014, 18p

Subject Terms: VITRIFICATION, CRYOPROTECTIVE agents, EMBRYOS, OVUM, CELL motility, SAMPLING (Process), BIOFLUORESCENCE