SAR Analysis of Novel Coxsackie virus A9 Capsid Binders.

Authors: Tammaro, Chiara, Plavec, Zlatka, Myllymäki, Laura, Mitchell, Cristopher, Consalvi, Sara, Biava, Mariangela, Ciogli, Alessia, Domanska, Aušra, Leppilampi, Valtteri, Buckner, Cienna, Manetto, Simone, Sciò, Pietro, Coluccia, Antonio, Laajala, Mira, Dondio, Giulio M., Bigogno, Chiara, Marjomäki, Varpu, Butcher, Sarah J., Poce, Giovanna

Source: Journal of Medicinal Chemistry; 10/10/2024, Vol. 67 Issue 19, p17144-17161, 18p

SARS-CoV-2 Production, Purification Methods and UV Inactivation for Proteomics and Structural Studies.

Authors: Plavec, Zlatka^1,2 (AUTHOR), Domanska, Aušra^1,2 (AUTHOR), Liu, Xiaonan² (AUTHOR), Laine, Pia² (AUTHOR), Paulin, Lars² (AUTHOR), Varjosalo, Markku² (AUTHOR), Auvinen, Petri² (AUTHOR), Wolf, Sharon G.³ (AUTHOR), Anastasina, Maria^1,2 (AUTHOR) maria.anastasina@helsinki.fi, Butcher, Sarah J.^1,2 (AUTHOR) maria.anastasina@helsinki.fi

Source: Viruses (1999-4915). Sep2022, Vol. 14 Issue 9, p1989-N.PAG. 12p.

Subject Terms: *SARS-CoV-2, *COVID-19, *PROTEOMICS

VitroJet: new features and case studies.

Authors: Henderikx, Rene J. M., Mann, Daniel, Domanska, Aušra, Dong, Jing, Shahzad, Saba, Lak, Behnam, Filopoulou, Aikaterini, Ludig, Damian, Grininger, Martin, Momoh, Jeffrey, Laanto, Elina, Oksanen, Hanna M., Bisikalo, Kyrylo, Williams, Pamela A., Butcher, Sarah J., Peters, Peter J., Beulen, Bart W. A. M. M.

Source: Acta Crystallographica: Section D, Structural Biology; Apr2024, Vol. 80 Issue 4, p232-246, 15p

Subject Terms: TICK-borne encephalitis viruses, OPTICAL measurements, TOBACCO mosaic virus, FLAVIVIRUSES, LIFTING & carrying (Human mechanics), ELECTRON microscopes, IMAGE converters

Strain-dependent neutralization reveals antigenic variation of human parechovirus 3

Authors: Karelehto, Eveliina, Sanden, Sabine, Geraets, James, Domanska, Aušra, Linden, Lonneke, Hoogendoorn, Dionne, Koen, Gerrit, Eijk, Hetty, Shakeel, Shabih, Beaumont, Tim, Jong, Menno, Pajkrt, Dasja, Butcher, Sarah, Wolthers, Katja

Source: Scientific reports. 7(1):1-10

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100182762450.0x000001&indx=1&recIds=ETOCvdc_100182762450.0x000001

Monolithic ion exchange chromatographic methods for virus purification

Authors: Oksanen, Hanna M., Domanska, Ausra, Bamford, Dennis H.

Source: In Virology 20 December 2012 434(2):271-277

Structural Studies Reveal that Endosomal Cations Promote Formation of Infectious Coxsackievirus A9 A-Particles, Facilitating RNA and VP4 Release.

Authors: Domanska, Aušra¹, Plavec, Zlatka¹, Ruokolainen, Visa², Löflund, Benita¹, Marjomäki, Varpu², Butcher, Sarah J.¹ sarah.butcher@helsinki.fi

Source: Journal of Virology. Dec2022, Vol. 96 Issue 24, p1-20. 20p.

Subject Terms: *FIELD-flow fractionation, *AMINO acid residues, *SERUM albumin, *HEAT shock factors, *NEONATAL sepsis, *RNA, *PLANT viruses

A novel druggable interprotomer pocket in the capsid of rhino- and enteroviruses.

Authors: Abdelnabi, Rana¹, Geraets, James A.^2,3, Ma, Yipeng¹, Mirabelli, Carmen¹, Flatt, Justin W.^2,3, Domanska, Aušra^2,3, Delang, Leen¹, Jochmans, Dirk¹, Kumar, Timiri Ajay⁴, Jayaprakash, Venkatesan⁴, Sinha, Barij Nayan⁴, Leyssen, Pieter¹, Butcher, Sarah J.^2,3, Sarah.Butcher@helsinki.fi, Neyts, Johan¹, Johan.Neyts@kuleuven.be

Source: PLoS Biology; 6/11/2019, Vol. 17 Issue 6, p1-17, 17p, 2 Diagrams, 2 Charts, 1 Graph

Molecular Organisation of Tick-Borne Encephalitis Virus.

Authors: Pulkkinen, Lauri I. A., Barrass, Sarah V., Domanska, Aušra, Överby, Anna K., Anastasina, Maria, Butcher, Sarah J.

Source: Viruses (1999-4915); Apr2022, Vol. 14 Issue 4, pN.PAG-N.PAG, 17p

Subject Terms: TICK-borne encephalitis viruses, MEMBRANE proteins, VIRAL proteins, RNA viruses, DENGUE, PROTEIN-protein interactions, FLAVIVIRUSES

Bacterial and Archeal Virus Entry

Authors: Poranen, Minna M., Domanska, Aušra

Source: In Reference Module in Life Sciences 2017

Identification of a conserved virion-stabilizing network inside the interprotomer pocket of enteroviruses.

Authors: Flatt, Justin W.^1,2, Domanska, Aušra^1,2, Seppälä, Alma L.^1,2, Butcher, Sarah J.^1,2 sarah.butcher@helsinki.fi

Source: Communications Biology. 2/26/2021, Vol. 4 Issue 1, p1-8. 8p.

Subject Terms: *ENTEROVIRUSES, *ANTIVIRAL agents, *COXSACKIEVIRUSES, *CAPSIDS, *LIGAND binding (Biochemistry)

Extracellular albumin and endosomal ions prime enterovirus particles for uncoating that can be prevented by fatty acid saturation.

Authors: Ruokolainen, Visa¹, Domanska, Aušra², Laajala, Mira¹, Pelliccia, Maria³, Butcher, Sarah J.², Marjomäki, Varpu¹

Source: Journal of Virology. Sep2019, Vol. 93 Issue 17, p1-38. 46p.

Subject Terms: *FATTY acids, *IONS, *POTASSIUM ions, *PARTICLES, *ENTEROVIRUSES, *POTASSIUM

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A 2.8-Angstrom-Resolution Cryo-Electron Microscopy Structure of Human Parechovirus 3 in Complex with Fab from a Neutralizing Antibody.

Authors: Domanska, Aušra^1,2 ausra.domanska@helsinki.fi, Flatt, Justin W.^1,2, Jukonen, Joonas J. J.^1,2, Geraets, James A.^1,2, Butcher, Sarah J.^1,2 sarah.butcher@helsinki.fi

Source: Journal of Virology. Feb2019, Vol. 93 Issue 4, p1-12. 12p.

Subject Terms: *MONOCLONAL antibodies, *SEPSIS, *VIRAL disease diagnosis, *ELECTRON microscopy, *ANTIVIRAL agents, *IMAGE reconstruction

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The structure of immature tick-borne encephalitis virus supports the collapse model of flavivirus maturation.

Authors: Anastasina, Maria^1,2, Füzik, Tibor³, Domanska, Aušra^1,2, Pulkkinen, Lauri Ilmari Aurelius^1,2, Šmerdová, Lenka³, Formanová, Petra Pokorná⁴, Straková, Petra^4,5,6, Nováček, Jiří³, Růžek, Daniel^4,5,6, Plevka, Pavel³ pavel.plevka@ceitec.muni.cz, Butcher, Sarah Jane^1,2 sarah.butcher@helsinki.fi

Source: Science Advances. 7/5/2024, Vol. 10 Issue 27, p1-13. 13p.

Subject Terms: *TICK-borne encephalitis viruses, *FLAVIVIRUSES, *ATOMIC models

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