Karyotype establishment and development of specific molecular markers of Aegilops geniculata Roth based on SLAF-seq

Authors: Wang, Yongfu, Fan, Jianzhong, Zhang, Hong, Deng, Pingchuan, Li, Tingdong, Chen, Chunhuan, Ji, Wanquan, Wang, Yajuan

Source: In Journal of Integrative Agriculture December 2024 23(12):3953-3965

Genome resources for the elite bread wheat cultivar Aikang 58 and mining of elite homeologous haplotypes for accelerating wheat improvement

Authors: Jia, Jizeng, Zhao, Guangyao, Li, Danping, Wang, Kai, Kong, Chuizheng, Deng, Pingchuan, Yan, Xueqing, Zhang, Xueyong, Lu, Zefu, Xu, Shujuan, Jiao, Yuannian, Chong, Kang, Liu, Xu, Cui, Dangqun, Li, Guangwei, Zhang, Yijing, Du, Chunguang, Wu, Liang, Li, Tianbao, Yan, Dong, Zhan, Kehui, Chen, Feng, Wang, Zhiyong, Zhang, Lichao, Kong, Xiuying, Ru, Zhengang, Wang, Daowen, Gao, Lifeng

Source: In Molecular Plant 4 December 2023 16(12):1893-1910

Genetic identification of the pleiotropic gene Tasg-D1/2 affecting wheat grain shape by regulating brassinolide metabolism

Authors: Zhang, Yaoyuan, Miao, Hanxiao, Wang, Chao, Zhang, Junjie, Zhang, Xiangyu, Shi, Xiaoxi, Xie, Songfeng, Li, Tingdong, Deng, Pingchuan, Wang, Changyou, Chen, Chunhuan, Zhang, Hong, Ji, Wanquan

Source: In Plant Science October 2022 323

Population‐level transcriptomes reveal gene expression and splicing underlying cadmium accumulation in barley

Authors: Deng, Pingchuan, Yan, Tao, Ji, Wanquan, Zhang, Guoping, Wu, Liang, Wu, Dezhi

Source: Plant journal. 112(3):847-859

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100163497245.0x000001&indx=1&recIds=ETOCvdc_100163497245.0x000001

A dominant spotted leaf gene TaSpl1 activates endocytosis and defense-related genes causing cell death in the absence of dominant inhibitors

Authors: Zhang, Hong ^*, Xu, Xiaomin, Wang, Mengmeng, Wang, Hui, Deng, Pingchuan, Zhang, Yaoyuan, Wang, Yanzhen, Wang, Changyou, Wang, Yajuan, Ji, Wanquan ^*

Source: In Plant Science September 2021 310

Nuclear translocation of OsMFT1 that is impeded by OsFTIP1 promotes drought tolerance in rice

Authors: Chen, Ying, Shen, Jun, Zhang, Liang, Qi, Haoyue, Yang, Lijia, Wang, Huanyu, Wang, Jiaxuan, Wang, Yuexing, Du, Hao, Tao, Zeng, Zhao, Ting, Deng, Pingchuan, Shu, Qingyao, Qian, Qian, Yu, Hao, Song, Shiyong

Source: In Molecular Plant 2 August 2021 14(8):1297-1311

The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat

Authors: Feng, Kewei, Cui, Licao, Wang, Le, Shan, Dai, Tong, Wei, Deng, Pingchuan, Yan, Zhaogui, Wang, Mengxing, Zhan, Haoshuang, Wu, Xiaotong, He, Weiming, Zhou, Xianqiang, Ji, Jingjing, Zhang, Guiping, Mao, Long, Karafiátová, Miroslava, Šimková, Hana, Doležel, Jaroslav, Du, Xianghong, Zhao, Shancen, Luo, Ming‐Cheng, Han, Dejun, Zhang, Chi, Kang, Zhensheng, Appels, Rudi, Edwards, David, Nie, Xiaojun, Weining, Song

Source: Plant biotechnology journal. 18(3):732-742

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100102879219.0x000001&indx=1&recIds=ETOCvdc_100102879219.0x000001

Cytogenetic identification and molecular mapping for the wheat-Thinopyrum ponticum introgression line with resistance to Fusarium head blight.

Authors: Yang, Xiaoying, Cheng, Xiaofang, Wang, Guangyi, Song, Siyuan, Ding, Xu, Xiong, Hui, Wang, Changyou, Zhao, Jixin, Li, Tingdong, Deng, Pingchuan, Liu, Xinlun, Chen, Chunhuan, Ji, Wanquan

Source: Theoretical & Applied Genetics; Aug2024, Vol. 137 Issue 8, p1-14, 14p

Population transcriptomic analysis identifies the comprehensive lncRNAs landscape of spike in wheat (Triticum aestivum L.).

Authors: Yang, Guang¹ (AUTHOR), Deng, Pingchuan¹ (AUTHOR), Guo, Qifan¹ (AUTHOR), Shi, Tingrui¹ (AUTHOR), Pan, Wenqiu¹ (AUTHOR), Cui, Licao² (AUTHOR), Liu, Xiaoqin³ (AUTHOR) xiaoqin.liu@pku-iaas.edu.cn, Nie, Xiaojun¹ (AUTHOR) small@nwsuaf.edu.cn

Source: BMC Plant Biology. 9/21/2022, Vol. 22 Issue 1, p1-16. 16p.

Subject Terms: *LINCRNA, *TRANSCRIPTOMES, *GENETIC variation

Divergent roles of FT-like 9 in flowering transition under different day lengths in Brachypodium distachyon

Authors: Qin, Zhengrui, Bai, Yuxue, Muhammad, Sajid, Wu, Xia, Deng, Pingchuan, Wu, Jiajie, An, Hailong, Wu, Liang

Source: Nature communications. 10(1):1-10

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100114606328.0x000001&indx=1&recIds=ETOCvdc_100114606328.0x000001

LncRNAs are cool regulators in cold exposure in plants

Authors: Deng, Pingchuan, Wu, Liang

Source: Science China.Life sciences. 62(7):978-981

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100146877984.0x000001&indx=1&recIds=ETOCvdc_100146877984.0x000001

Genome-Wide Comparative Analysis of the Cytochrome P450 Monooxygenase Family in 19 Aphid Species and Their Expression Analysis in 4 Cereal Crop Aphids.

Authors: Wang, Zhenyu, Hao, Weixi, Wang, Hao, Deng, Pingchuan, Li, Tingdong, Wang, Changyou, Zhao, Jixin, Chen, Chunhuan, Ji, Wanquan, Liu, Xinlun

Source: International Journal of Molecular Sciences; Jun2024, Vol. 25 Issue 12, p6668, 24p

Subject Terms: CYTOCHROME P-450, PESTICIDE resistance, RUSSIAN wheat aphid, APHIDS, GREENBUG, PLANT hormones

Combined GWAS and eGWAS reveals the genetic basis underlying drought tolerance in emmer wheat (Triticum turgidum L.).

Authors: Yang, Guang, Pan, Yan, Pan, Wenqiu, Song, Qingting, Zhang, Ruoyu, Tong, Wei, Cui, Licao, Ji, Wanquan, Song, Weining, Song, Baoxing, Deng, Pingchuan, Nie, Xiaojun

Source: New Phytologist; Jun2024, Vol. 242 Issue 5, p2115-2131, 17p

Subject Terms: EMMER wheat, DROUGHT tolerance, DURUM wheat, WHEAT breeding, GENOME-wide association studies, GERMPLASM, WHEAT

Genome-wide identification and characterization of lipoxygenase genes related to the English grain aphid infestation response in wheat.

Authors: Wang, Zhenyu¹, Luo, Yufeng¹, Yu, Jiuyang¹, Kou, Xudan¹, Xie, Lincai¹, Deng, Pingchuan^1,2, Li, Tingdong^1,2, Chen, Chunhuan^1,2, Ji, Wanquan^1,2, jiwanquan2008@126.com, Liu, Xinlun^1,2, liuxunlun@nwafu.edu.cn

Source: Planta: An International Journal of Plant Biology; May2023, Vol. 257 Issue 5, p1-21, 21p

GenoBaits®WheatplusEE: a targeted capture sequencing panel for quick and accurate identification of wheat–Thinopyrum derivatives.

Authors: Deng, Pingchuan¹ (AUTHOR), Du, Xin¹ (AUTHOR), Wang, Yanzhen^1,2 (AUTHOR), Yang, Xiaoying¹ (AUTHOR), Cheng, Xiaofang¹ (AUTHOR), Huang, Chenxi¹ (AUTHOR), Li, Tingting³ (AUTHOR), Li, Tingdong¹ (AUTHOR), Chen, Chunhuan¹ (AUTHOR), Zhao, Jixin¹ (AUTHOR), Wang, Changyou¹ (AUTHOR), Liu, Xinlun¹ (AUTHOR), Tian, Zengrong¹ (AUTHOR), Ji, Wanquan¹ (AUTHOR) jiwq1319@nwafu.edu.cn

Source: Theoretical & Applied Genetics. Feb2024, Vol. 137 Issue 2, p1-14. 14p.

Switching action modes of miR408-5p mediates auxin signaling in rice.

Authors: Rong, Fuxi, Lv, Yusong, Deng, Pingchuan, Wu, Xia, Zhang, Yaqi, Yue, Erkui, Shen, Yuxin, Muhammad, Sajid, Ni, Fangrui, Bian, Hongwu, Wei, Xiangjin, Zhou, Weijun, Hu, Peisong, Wu, Liang

Source: Nature Communications; 1/11/2024, Vol. 15 Issue 1, p1-17, 17p

Conservation analysis of long non-coding RNAs in plants

Authors: Deng, Pingchuan, Liu, Shu, Nie, Xiaojun, Weining, Song, Wu, Liang

Source: Science China.Life sciences. 61(2):190-198

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100146857692.0x000001&indx=1&recIds=ETOCvdc_100146857692.0x000001

An intron-located single nucleotide variation of TaGS5-3D is related to wheat grain size through accumulating intron retention transcripts.

Authors: Zhang, Yaoyuan, Miao, Hanxiao, Xiao, Yi, Wang, Chao, Zhang, Junjie, Shi, Xiaoxi, Xie, Songfeng, Wang, Changyou, Li, Tingdong, Deng, Pingchuan, Chen, Chunhuan, Zhang, Hong, Ji, Wanquan

Source: Theoretical & Applied Genetics; Sep2023, Vol. 136 Issue 9, p1-18, 18p

Pesticide application has little influence on coding and non-coding gene expressions in rice

Authors: Muhammad, Sajid, Tan, Jingai, Deng, Pingchuan, Li, Tingting, He, Haohua, Bian, Jianmin, Wu, Liang

Source: BMC genomics. 20(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100127147029.0x000001&indx=1&recIds=ETOCvdc_100127147029.0x000001

Intra-Varietal Diversity and Its Contribution to Wheat Evolution, Domestication, and Improvement in Wheat.

Authors: Li, Tianbao, Kong, Chuizheng, Deng, Pingchuan, Li, Chengdao, Zhao, Guangyao, Li, Hongjie, Gao, Lifeng, Cui, Dangqun, Jia, Jizeng

Source: International Journal of Molecular Sciences; Jun2023, Vol. 24 Issue 12, p10217, 18p

Subject Terms: SPECIALTY crops, PLANT breeding, FOOD crops, GENETIC variation, WHEAT, CHROMOSOME duplication