QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy

Authors: Nelson, Glyn, Boehm, Ulrike, Bagley, Steve, Bajcsy, Peter, Bischof, Johanna, Brown, Claire M, Dauphin, Aurelien, Dobbie, Ian M, Eriksson, John E, Faklaris, Orestis, Fernandez-Rodriguez, Julia, Ferrand, Alexia, Gelman, Laurent, Gheisari, Ali, Hartmann, Hella, Kukat, Christian, Laude, Alex, Mitkovski, Miso, Munck, Sebastian, North, Alison J, Rasse, Tobias M, Resch-Genger, Ute, Schuetz, Lucas C, Seitz, Arne, Strambio-De-Castillia, Caterina, Swedlow, Jason R, Alexopoulos, Ioannis, Aumayr, Karin, Avilov, Sergiy, Bakker, Gert-Jan, Bammann, Rodrigo R, Bassi, Andrea, Beckert, Hannes, Beer, Sebastian, Belyaev, Yury, Bierwagen, Jakob, Birngruber, Konstantin A, Bosch, Manel, Breitlow, Juergen, Cameron, Lisa A, Chalfoun, Joe, Chambers, James J, Chen, Chieh-Li, Conde-Sousa, Eduardo, Corbett, Alexander D, Cordelieres, Fabrice P, Del Nery, Elaine, Dietzel, Ralf, Eismann, Frank, Fazeli, Elnaz, Felscher, Andreas, Fried, Hans, Gaudreault, Nathalie, Goh, Wah Ing, Guilbert, Thomas, Hadleigh, Roland, Hemmerich, Peter, Holst, Gerhard A, Itano, Michelle S, Jaffe, Claudia B, Jambor, Helena K, Jarvis, Stuart C, Keppler, Antje, Kirchenbuechler, David, Kirchner, Marcel, Kobayashi, Norio, Krens, Gabriel, Kunis, Susanne, Lacoste, Judith, Marcello, Marco, Martins, Gabriel G, Metcalf, Daniel J, Mitchell, Claire A, Moore, Joshua, Mueller, Tobias, Nelson, Michael S, Ogg, Stephen, Onami, Shuichi, Palmer, Alexandra L, Paul-Gilloteaux, Perrine, Pimentel, Jaime A, Plantard, Laure, Podder, Santosh, Rexhepaj, Elton, Royon, Arnaud, Saari, Markku A, Schapman, Damien, Schoonderwoert, Vincent, Schroth-Diez, Britta, Schwartz, Stanley, Shaw, Michael, Spitaler, Martin, Stoeckl, Martin T, Sudar, Damir, Teillon, Jeremie, Terjung, Stefan, Thuenauer, Roland, Wilms, Christian D, Wright, Graham D, Nitschke, Roland

Source: J. Microsc. 2021;1-18

Subject Terms: Quantitative Biology - Other Quantitative Biology, Physics - Instrumentation and Detectors

Access URL: http://arxiv.org/abs/2101.09153

Agonists of prostaglandin E₂ receptors as potential first in class treatment for nephronophthisis and related ciliopathies

Authors: Garcia, Hugo, Serafin, Alice S., Silbermann, Flora, Porée, Esther, Viau, Amandine, Mahaut, Clémentine, Billot, Katy, Birgy, Éléonore, Garfa-Traore, Meriem, Roy, Stéphanie, Ceccarelli, Salomé, Mehraz, Manon, Rodriguez, Pamela C., Deleglise, Bérangère, Furio, Laetitia, Jabot-Hanin, Fabienne, Cagnard, Nicolas, Del Nery, Elaine, Fila, Marc, Sin-Monnot, Soraya, Antignac, Corinne, Lyonnet, Stanislas, Krug, Pauline, Salomon, Rémi, Annereau, Jean-Philippe, Benmerah, Alexandre, Delous, Marion, Briseño-Roac, Luis, Saunier, Sophie

Source: Proceedings of the National Academy of Sciences of the United States of America, 2022 May 01. 119(18), 1-11.

Access URL: https://www.jstor.org/stable/27151577

Combinatorial drug screening on 3D Ewing sarcoma spheroids using droplet-based microfluidics

Authors: Fevre, Romain ^{1, 2}, Mary, Gaëtan ³, Vertti-Quintero, Nadia ², Durand, Aude ², Tomasi, Raphaël F.-X. ^{1, 2, 3}, Del Nery, Elaine ^{4, ∗}, Baroud, Charles N. ^{1, 2, 5, ∗∗}

Source: In iScience 19 May 2023 26(5)

The FDA-approved drug Auranofin has a dual inhibitory effect on SARS-CoV-2 entry and NF-κB signaling

Authors: Laplantine, Emmanuel, Chable-Bessia, Christine, Oudin, Anne, Swain, Jitendryia, Soria, Adèle, Merida, Peggy, Gourdelier, Manon, Mestiri, Sarra, Besseghe, Indira, Bremaud, Erwan, Neyret, Aymeric, Lyonnais, Sebastien, Favard, Cyril, Benaroch, Philippe, Hubert, Mathieu, Schwartz, Olivier, Guerin, Maryse, Danckaert, Anne, Del Nery, Elaine, Muriaux, Delphine, Weil, Robert

Source: In iScience 21 October 2022 25(10)

Discovery of Genes that Modulate Flavivirus Replication in an Interferon-Dependent Manner

Authors: Lesage, Sarah, Chazal, Maxime, Beauclair, Guillaume, Batalie, Damien, Cerboni, Silvia, Couderc, Elodie, Lescure, Aurianne, Del Nery, Elaine, Tangy, Frédéric, Martin, Annette, Manel, Nicolas, Jouvenet, Nolwenn

Source: In Journal of Molecular Biology 30 March 2022 434(6)

Small Molecule Enhancers of Endosome-to-Cytosol Import Augment Anti-tumor Immunity

Authors: Kozik, Patrycja, Gros, Marine, Itzhak, Daniel N., Joannas, Leonel, Heurtebise-Chrétien, Sandrine, Krawczyk, Patrycja A., Rodríguez-Silvestre, Pablo, Alloatti, Andrés, Magalhaes, Joao Gamelas, Del Nery, Elaine, Borner, Georg H.H., Amigorena, Sebastian

Source: In Cell Reports 14 July 2020 32(2)

Compound Functional Prediction Using Multiple Unrelated Morphological Profiling Assays

Authors: Rose, France ^**, Basu, Sreetama ^**, Rexhepaj, Elton, Chauchereau, Anne, Del Nery, Elaine, Genovesio, Auguste ^*

Source: In SLAS Technology June 2018 23(3):243-251

Protein arginine methyltransferase 5: A novel therapeutic target for triple‐negative breast cancers

Authors: Vinet, Mathilde, Suresh, Samyuktha, Maire, Virginie, Monchecourt, Clarisse, Némati, Fariba, Lesage, Laetitia, Pierre, Fabienne, Ye, Mengliang, Lescure, Auriane, Brisson, Amélie, Meseure, Didier, Nicolas, André, Rigaill, Guillem, Marangoni, Elisabetta, Del Nery, Elaine, Roman‐Roman, Sergio, Dubois, Thierry

Source: Cancer medicine. 8(5):2414-2428

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100083695291.0x000001&indx=1&recIds=ETOCvdc_100083695291.0x000001

Recombinant Antibodies to the Small GTPase Rab6 as Conformation Sensors

Authors: Nizak, Clément, Monier, Solange, del Nery, Elaine, Moutel, Sandrine, Goud, Bruno, Perez, Franck

Source: Science, 2003 May 01. 300(5621), 984-987.

Access URL: https://www.jstor.org/stable/3833936

High-Throughput Drug Screening Identifies Pazopanib and Clofilium Tosylate as Promising Treatments for Malignant Rhabdoid Tumors

Authors: Chauvin, Céline, Leruste, Amaury, Tauziede-Espariat, Arnault, Andrianteranagna, Mamy, Surdez, Didier, Lescure, Aurianne, Han, Zhi-Yan, Anthony, Elodie, Richer, Wilfrid, Baulande, Sylvain, Bohec, Mylène, Zaidi, Sakina, Aynaud, Marie-Ming, Maillot, Laetitia, Masliah-Planchon, Julien, Cairo, Stefano, Roman-Roman, Sergio, Delattre, Olivier, Del Nery, Elaine, Bourdeaut, Franck

Source: Cell reports. 21(7):1737-1745

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100061020169.0x000001&indx=1&recIds=ETOCvdc_100061020169.0x000001

A Novel Organelle Map Framework for High-Content Cell Morphology Analysis in High Throughput

Authors: Schauer, Kristine ^**, Grossier, Jean-Philippe, Duong, Tarn ^*, Chapuis, Violaine, Degot, Sébastien, Lescure, Aurianne, Del Nery, Elaine, Goud, Bruno

Source: In SLAS Discovery February 2014 19(2):317-324

Revealing invisible cell phenotypes with conditional generative modeling.

Authors: Lamiable, Alexis, Champetier, Tiphaine, Leonardi, Francesco, Cohen, Ethan, Sommer, Peter, Hardy, David, Argy, Nicolas, Massougbodji, Achille, Del Nery, Elaine, Cottrell, Gilles, Kwon, Yong-Jun, Genovesio, Auguste

Source: Nature Communications; 10/11/2023, Vol. 14 Issue 1, p1-12, 12p

Subject Terms: DRUG discovery, PHENOTYPES, LIFE sciences, PHENOTYPIC plasticity, CELL imaging

Quantitative Characterization of the Effect of Biogenic silver-based Nanoparticles on Breast Cancer Cells by High Content Analysis

Authors: Ferreira, Veronica, Eugenio, Mateus, Del Nery, Elaine, de Souza, Wanderley, Sant’Anna, Celso

Source: Current Nanomaterials; 2024, Vol. 9 Issue: 4 p355-366, 12p

Polθ is phosphorylated by PLK1 to repair double-strand breaks in mitosis.

Authors: Gelot, Camille, Kovacs, Marton Tibor, Miron, Simona, Mylne, Emilie, Haan, Alexis, Boeffard-Dosierre, Liza, Ghouil, Rania, Popova, Tatiana, Dingli, Florent, Loew, Damarys, Guirouilh-Barbat, Josée, Del Nery, Elaine, Zinn-Justin, Sophie, Ceccaldi, Raphael

Source: Nature; Sep2023, Vol. 621 Issue 7978, p415-422, 8p

Cleavage of Toll-like receptor 3 by cathepsins B and H is essential for signaling

Authors: Garcia-Cattaneo, Alejandra, Gobert, François-Xavier, Müller, Mélanie, Toscano, Florent, Flores, Marcella, Lescure, Aurianne, Del Nery, Elaine, Benaroch, Philippe

Source: Proceedings of the National Academy of Sciences of the United States of America, 2012 Jun 01. 109(23), 9053-9058.

Access URL: https://www.jstor.org/stable/41603050

Cytidine analogs are synthetic lethal with base excision repair default due to MBD4 deficiency.

Authors: Chabot, Thomas, Nemati, Fariba, Herbette, Aurélie, Demeyer, Alexandre, Dayot, Stéphane, Ganier, Olivier, Alsafadi, Samar, Gardrat, Sophie, Mariani, Pascale, Luporsi, Marie, Corbé, Maxime, Servois, Vincent, Cassoux, Nathalie, Decaudin, Didier, Roman, Sergio Roman, Del Nery, Elaine, Piperno-Neumann, Sophie, Stern, Marc-Henri, Rodrigues, Manuel

Source: NPJ Precision Oncology; 11/2/2022, Vol. 6 Issue 1, p1-9, 9p

Subject Terms: DRUG repositioning, UVEA cancer, DEAMINATION, CANCER cells

Upregulation of the Mevalonate Pathway through EWSR1-FLI1/EGR2 Regulatory Axis Confers Ewing Cells Exquisite Sensitivity to Statins.

Authors: Buchou, Charlie, Laud-Duval, Karine, van der Ent, Wietske, Grossetête, Sandrine, Zaidi, Sakina, Gentric, Géraldine, Corbé, Maxime, Müller, Kévin, Del Nery, Elaine, Surdez, Didier, Delattre, Olivier

Source: Cancers; May2022, Vol. 14 Issue 9, pN.PAG-N.PAG, 24p

Subject Terms: STATINS (Cardiovascular agents), IN vitro studies, BIOLOGICAL models, METABOLISM, APOPTOSIS, CELL lines, REACTIVE oxygen species, HYDROXY acids, CARRIER proteins, EWING'S sarcoma, ENZYME inhibitors, LIPID peroxidation (Biology), PHARMACODYNAMICS

RAS activation induces synthetic lethality of MEK inhibition with mitochondrial oxidative metabolism in acute myeloid leukemia

Authors: Decroocq, Justine, Birsen, Rudy, Montersino, Camille, Chaskar, Prasad, Mano, Jordi, Poulain, Laury, Friedrich, Chloe, Alary, Anne-Sophie, Guermouche, Helene, Sahal, Ambrine, Fouquet, Guillemette, Gotanègre, Mathilde, Simonetta, Federico, Mouche, Sarah, Gestraud, Pierre, Lescure, Auriane, Del Nery, Elaine, Bosc, Claudie, Grenier, Adrien, Mazed, Fetta, Mondesir, Johanna, Chapuis, Nicolas, Ho, Liza, Boughalem, Aicha, Lelorc’h, Marc, Gobeaux, Camille, Fontenay, Michaela, Recher, Christian, Vey, Norbert, Guillé, Arnaud, Birnbaum, Daniel, Hermine, Olivier, Radford-Weiss, Isabelle, Tsantoulis, Petros, Collette, Yves, Castellano, Rémy, Sarry, Jean-Emmanuel, Pasmant, Eric, Bouscary, Didier, Kosmider, Olivier, Tamburini, Jerome

Source: Leukemia; May 2022, Vol. 36 Issue: 5 p1237-1252, 16p

Synthesis and Hydrolysis by Cysteine and Serine Proteases of Short Internally Quenched Fluorogenic Peptides

Authors: Melo, Robson L., Alves, Lira C., Del Nery, Elaine, Juliano, Luiz, Juliano, Maria A.

Source: In Analytical Biochemistry 1 June 2001 293(1):71-77

Characterization of two cysteine proteinases secreted by Fasciola hepatica and demonstration of their kininogenase activity

Authors: Cordova, Martha, Jara, Jose, Del Nery, Elaine, Hirata, Isaura Y, Araújo, Mariana S, Carmona, Adriana K, Juliano, Maria Aparecida, Juliano, Luiz ^*

Source: In Molecular & Biochemical Parasitology 2001 116(2):109-115