DNA barcodes for soil animal taxonomy

Authors: Rougerie, Rodolphe, Decaëns, Thibaud, Deharveng, Louis, Porco, David, James, Sam W., Chang, Chih-Han, Richard, Benoit, Potapov, Mikhail, Suhardjono, Yayuk, Hebert, Paul D.N.

Source: Pesquisa Agropecuária Brasileira. August 2009 44(8)

Subject Terms: Collembola, cryptic diversity, DNA barcoding, Oligochaeta, species identification, taxonomic crisis, taxonomic impediment

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Access URL: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-204X2009000800002

Putting earthworm conservation on the map: Shortfalls and solutions for developing earthworm conservation

Authors: Gérard, Sylvain ^{a, b, c, ⁎}, Decaëns, Thibaud ^{b, c}, Butt, Kevin R. ^{c, d}, Briones, Maria J.I. ^{c, e}, Capowiez, Yvan ^f, Cluzeau, Daniel ^{c, g}, Hoeffner, Kevin ^{c, g}, Le Bayon, Renée-Claire ^{c, h}, Marchán, Daniel F. ⁱ, Marsden, Claire ^a, Muys, Bart ^{c, j}, Pelosi, Céline ^{c, f}, Pérès, Guénola ^{c, k}, Phillips, Helen R.P. ^{c, l}, Santini, Luca ^{c, m}, Thuiller, Wilfried ^{c, n}, Hedde, Mickaël ^{a, c}

Source: In Biological Conservation February 2025 302

Driving factors of earthworm communities in Mediterranean urban parks

Authors: Eydoux, Louise, Cortet, Jérôme, Barantal, Sandra, Decaens, Thibaud, Vergnes, Alan

Source: In Applied Soil Ecology October 2024 202

Homogeneous earthworm communities in Southern Ontario

Authors: Maggia, Marie-Eugénie, Decaëns, Thibaud, Cottenie, Karl, Steinke, Dirk

Source: In European Journal of Soil Biology September 2024 122

Environmental drivers of genetic diversity and phylogeographic pattern in urban earthworms

Authors: Mautuit, Ambre, Marchán, Daniel Fernández, Barantal, Sandra, Brand, Matthias, Lucas, Annick, Cortet, Jérôme, Vergnes, Alan, Decaëns, Thibaud

Source: In European Journal of Soil Biology June 2024 121

Let earthworms be functional - Definition of new functional groups based on their bioturbation behavior

Authors: Capowiez, Yvan, Marchán, Daniel, Decaëns, Thibaud, Hedde, Mickaël, Bottinelli, Nicolas

Source: In Soil Biology and Biochemistry January 2024 188

Understanding the diversification and functional radiation of Aporrectodea (Crassiclitellata, Lumbricidae) through molecular phylogenetics of its endemic species

Authors: Marchán, Daniel Fernández, Navarro, Alejandro Martínez, Pinadero, Sergio Jiménez, Gerard, Sylvain, Hedde, Mickaël, Domínguez, Jorge, Decaëns, Thibaud, Novo, Marta

Source: In European Journal of Soil Biology November-December 2023 119

Amazonian earthworm biodiversity is heavily impacted by ancient and recent human disturbance

Authors: Conrado, Ana C., Demetrio, Wilian C., Stanton, David W.G., Bartz, Marie L.C., James, Samuel W., Santos, Alessandra, da Silva, Elodie, Ferreira, Talita, Acioli, Agno N.S., Ferreira, Alexandre C., Maia, Lilianne S., Silva, Telma A.C., Lavelle, Patrick, Velasquez, Elena, Tapia-Coral, Sandra C., Muniz, Aleksander W., Segalla, Rodrigo F., Decaëns, Thibaud, Nadolny, Herlon S., Peña-Venegas, Clara P., Pasini, Amarildo, de Oliveira Júnior, Raimundo C., Kille, Peter, Brown, George G., Cunha, Luís

Source: In Science of the Total Environment 15 October 2023 895

Time to refine the geography of biodiversity hotspots by integrating molecular data: The Mediterranean Basin as a case study

Authors: Perret, Jan, Cobelli, Océane, Taudière, Adrien, Andrieu, Julien, Aumeeruddy-Thomas, Yildiz, Ben Souissi, Jamila, Besnard, Guillaume, Casazza, Gabriele, Crochet, Pierre-André, Decaëns, Thibaud, Denis, Françoise, Geniez, Philippe, Loizides, Michael, Médail, Frédéric, Pasqualini, Vanina, Speciale, Claudia, Battesti, Vincent, Chevaldonné, Pierre, Lejeusne, Christophe, Richard, Franck

Source: In Biological Conservation August 2023 284

Environmental drivers of earthworm communities along an elevational gradient in the French Alps

Authors: Gabriac, Quentin, Ganault, Pierre, Barois, Isabelle, Aranda-Delgado, Eduardo, Cimetière, Elisa, Cortet, Jérôme, Gautier, Montan, Hedde, Mickaël, Marchán, Daniel F., Pimentel Reyes, José Carlos, Stokes, Alexia, Decaëns, Thibaud

Source: In European Journal of Soil Biology May-June 2023 116

A common framework for developing robust soil fauna classifications

Authors: Hedde, Mickael, Blight, Olivier, Briones, Maria J.I., Bonfanti, Jonathan, Brauman, Alain, Brondani, Margot, Calderón Sanou, Irene, Clause, Julia, Conti, Erminia, Cortet, Jérôme, Decaëns, Thibaud, Erktan, Amandine, Gérard, Sylvain, Goulpeau, Arnaud, Iannelli, Maeva, Joimel-Boulanger, Sophie, Jouquet, Pascal, Le Guillarme, Nicolas, Marsden, Claire, Martinez Almoyna, Camille, Mulder, Christian, Perrin, William, Pétillon, Julien, Pey, Benjamin, Potapov, Anton M., Si-moussi, Sara, Thuiller, Wilfried, Trap, Jean, Vergnes, Alan, Zaitsev, Andrey, Capowiez, Yvan

Source: In Geoderma 15 November 2022 426

Soil macroinvertebrate communities: A world‐wide assessment

Authors: Lavelle, Patrick, Mathieu, Jérôme, Spain, Alister, Brown, George, Fragoso, Carlos, Lapied, Emmanuel, De Aquino, Adriana, Barois, Isabelle, Barrios, Edmundo, Barros, Maria Eleusa, Bedano, Jose Camilo, Blanchart, Eric, Caulfield, Mark, Chagueza, Yamileth, Dai, Jun, Decaëns, Thibaud, Dominguez, Anahi, Dominguez, Yamileth, Feijoo, Alexander, Folgarait, Patricia, Fonte, Steven J., Gorosito, Norma, Huerta, Esperanza, Jimenez, Juan Jose, Kelly, Courtland, Loranger, Gladys, Marchão, Robelio, Marichal, Raphael, Praxedes, Catarina, Rodriguez, Leonardo, Rousseau, Guillaume, Rousseau, Laurent, Ruiz, Nuria, Sanabria, Catalina, Suarez, Juan Carlos, Tondoh, Jerôme Ebagnerin, De Valença, Anne, Vanek, Steven J., Vasquez, Joel, Velasquez, Elena, Webster, Emily, Zhang, Chi

Source: Global ecology & biogeography. 31(7):1261-1276

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100163316119.0x000001&indx=1&recIds=ETOCvdc_100163316119.0x000001

Size fractions of organic matter pools influence their stability: Application of the Rock-Eval® analysis to beech forest soils

Authors: SEBAG, David, VERRECCHIA, Eric P., ADATTE, Thierry, AUBERT, Michaël, CAILLEAU, Guillaume, DECAËNS, Thibaud, KOWALEWSKI, Isabelle, TRAP, Jean, BUREAU, Fabrice, HEDDE, Mickaël

Source: Pedosphere. 32(4):565-575

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100162669901.0x000001&indx=1&recIds=ETOCvdc_100162669901.0x000001

Functional and taxonomic responses of tropical moth communities to deforestation

Authors: Correa‐Carmona, Yenny, Rougerie, Rodolphe, Arnal, Pierre, Ballesteros‐Mejia, Liliana, Beck, Jan, Dolédec, Sylvain, Ho, Chris, Kitching, Ian J., Lavelle, Patrick, Le Clec'h, Solen, Lopez‐Vaamonde, Carlos, Martins, Marlúcia B., Murienne, Jérôme, Oszwald, Johan, Ratnasingham, Sujeevan, Decaëns, Thibaud

Source: Insect conservation and diversity. 15(2):236-247

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100144663057.0x000001&indx=1&recIds=ETOCvdc_100144663057.0x000001

Relative importance of tree species richness, tree functional type, and microenvironment for soil macrofauna communities in European forests

Authors: Ganault, Pierre, Nahmani, Johanne, Hättenschwiler, Stephan, Gillespie, Lauren Michelle, David, Jean-François, Henneron, Ludovic, Iorio, Etienne, Mazzia, Christophe, Muys, Bart, Pasquet, Alain, Prada-Salcedo, Luis Daniel, Wambsganss, Janna, Decaëns, Thibaud

Source: Oecologia, 2021 Jun 01. 196(2), 455-468.

Access URL: https://www.jstor.org/stable/48696501

Leaf litter morphological traits, invertebrate body mass and phylogenetic affiliation explain the feeding and feces properties of saprophagous macroarthropods

Authors: Ganault, Pierre, Barantal, Sandra, Coq, Sylvain, Hättenschwiler, Stephan, Lucas, Shéhérazade, Decaëns, Thibaud, Nahmani, Johanne

Source: In European Journal of Soil Biology March-April 2022 109

At each site its diversity: DNA barcoding reveals remarkable earthworm diversity in neotropical rainforests of French Guiana

Authors: Maggia, Marie-Eugénie, Decaëns, Thibaud, Lapied, Emmanuel, Dupont, Lise, Roy, Virginie, Schimann, Heidy, Orivel, Jérôme, Murienne, Jérôme, Baraloto, Christopher, Cottenie, Karl, Steinke, Dirk

Source: In Applied Soil Ecology August 2021 164

DNA metabarcoding illuminates the black box of soil animal biodiversity

Authors: Decaëns, Thibaud

Source: Molecular ecology. 30(1):33-36

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100112499151.0x000001&indx=1&recIds=ETOCvdc_100112499151.0x000001

A 'Dirty' Footprint: Macroinvertebrate diversity in Amazonian Anthropic Soils

Authors: Demetrio, Wilian C., Conrado, Ana C., Acioli, Agno N. S., Ferreira, Alexandre C., Bartz, Marie L. C., James, Samuel W., Silva, Elodie, Maia, Lilianne S., Martins, Gilvan C., Macedo, Rodrigo S., Stanton, David W. G., Lavelle, Patrick, Velasquez, Elena, Zangerlé, Anne, Barbosa, Rafaella, Tapia‐Coral, Sandra C., Muniz, Aleksander W., Santos, Alessandra, Ferreira, Talita, Segalla, Rodrigo F., Decaëns, Thibaud, Nadolny, Herlon S., Peña‐Venegas, Clara P., Maia, Cláudia M. B. F., Pasini, Amarildo, Mota, André F., Taube Júnior, Paulo S., Silva, Telma A. C., Rebellato, Lilian, Oliveira Júnior, Raimundo C., Neves, Eduardo G., Lima, Helena P., Feitosa, Rodrigo M., Vidal Torrado, Pablo, McKey, Doyle, Clement, Charles R., Shock, Myrtle P., Teixeira, Wenceslau G., Motta, Antônio C. V., Melo, Vander F., Dieckow, Jeferson, Garrastazu, Marilice C., Chubatsu, Leda S., Kille, Peter, Brown, George G., Cunha, Luís

Source: Global change biology. 27(19):4575-4591

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100128889908.0x000001&indx=1&recIds=ETOCvdc_100128889908.0x000001

The disjunct distribution of relict earthworm genera clarifies the early historical biogeography of the Lumbricidae (Crassiclitellata, Annelida)

Authors: Marchán, Daniel F., Csuzdi, Csaba, Decaëns, Thibaud, Szederjesi, Timea, Pizl, Vaclav, Domínguez, Jorge

Source: Journal of zoological systematics and evolutionary research. 59(8):1703-1717

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100151872912.0x000001&indx=1&recIds=ETOCvdc_100151872912.0x000001