p53 mediates target gene association with nuclear speckles for amplified RNA expression

Authors: Alexander, Katherine A., Coté, Allison, Nguyen, Son C., Zhang, Liguo, Gholamalamdari, Omid, Agudelo-Garcia, Paula, Lin-Shiao, Enrique, Tanim, K.M.A., Lim, Joan, Biddle, Nicolas, Dunagin, Margaret C., Good, Charly R., Mendoza, Mariel R., Little, Shawn C., Belmont, Andrew, Joyce, Eric F., Raj, Arjun, Berger, Shelley L.

Source: In Molecular Cell 15 April 2021 81(8):1666-1681

Genetic Variation in Type 1 Diabetes Reconfigures the 3D Chromatin Organization of T Cells and Alters Gene Expression

Authors: Fasolino, Maria, Goldman, Naomi, Wang, Wenliang, Cattau, Benjamin, Zhou, Yeqiao, Petrovic, Jelena, Link, Verena M., Cote, Allison, Chandra, Aditi, Silverman, Michael, Joyce, Eric F., Little, Shawn C., Kaestner, Klaus H., Naji, Ali, Raj, Arjun, Henao-Mejia, Jorge, Faryabi, Robert B., Vahedi, Golnaz

Source: In Immunity 18 February 2020 52(2):257-274

Mitotic transcription and waves of gene reactivation during mitotic exit

Authors: Palozola, Katherine C., Donahue, Greg, Liu, Hong, Grant, Gregory R., Becker, Justin S., Cote, Allison, Yu, Hongtao, Raj, Arjun, Zaret, Kenneth S.

Source: Science, 2017 Oct 01. 358(6359), 119-122.

Access URL: https://www.jstor.org/stable/26399997

Post-transcriptional splicing can occur in a slow-moving zone around the gene.

Authors: Coté, Allison¹, O'Farrell, Aoife¹, Dardani, Ian¹, Dunagin, Margaret¹, Coté, Chris¹, Yihan Wan², Bayatpour, Sareh¹, Drexler, Heather L.³, Alexander, Katherine A.⁴, Fei Chen⁵, Wassie, Asmamaw T.⁶, Patel, Rohan¹, Pham, Kenneth⁶, Boyden, Edward S.⁷, Berger, Shelly⁴, Phillips-Cremins, Jennifer¹, Churchman, L. Stirling³, Raj, Arjun^1,8 arjunraj@seas.upenn.edu

Source: eLife. 4/5/2024, p1-26. 26p.

Subject Terms: *RNA splicing, *EXPANSION microscopy, *NUCLEOPLASM, *INTRONS, *GENES, *RNA, *SPLICEOSOMES

FISHing Out the Details of CRISPR Genome Tracks

Authors: Coté, Allison J., Raj, Arjun

Source: In Biophysical Journal 28 March 2017 112(6):1045-1046

Cell type determination for cardiac differentiation occurs soon after seeding of human-induced pluripotent stem cells.

Authors: Jiang, Connie L., Goyal, Yogesh, Jain, Naveen, Wang, Qiaohong, Truitt, Rachel E., Coté, Allison J., Emert, Benjamin, Mellis, Ian A., Kiani, Karun, Yang, Wenli, Jain, Rajan, Raj, Arjun

Source: Genome Biology; 4/5/2022, Vol. 23 Issue 1, p1-29, 29p

CTCF blocks antisense transcription initiation at divergent promoters

Authors: Luan, Jing, Vermunt, Marit W., Syrett, Camille M., Coté, Allison, Tome, Jacob M., Zhang, Haoyue, Huang, Anran, Luppino, Jennifer M., Keller, Cheryl A., Giardine, Belinda M., Zhang, Shiping, Dunagin, Margaret C., Zhang, Zhe, Joyce, Eric F., Lis, John T., Raj, Arjun, Hardison, Ross C., Blobel, Gerd A.

Source: Nature Structural and Molecular Biology; November 2022, Vol. 29 Issue: 11 p1136-1144, 9p

Gene regulation gravitates toward either addition or multiplication when combining the effects of two signals.

Authors: Sanford, Eric M., Emert, Benjamin L., Coté, Allison, Raj, Arjun

Source: eLife; 12/29/2020, p1-25, 25p

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.

This result is not displayed to guests.
Login for full access.