Improving the Diagnosis of Bacterial Infections: Evaluation of 16S rRNA Nanopore Metagenomics in Culture-Negative Samples

Authors: Coralie Bouchiat, Christophe Ginevra, Yvonne Benito, Tiphaine Gaillard, Hélène Salord, Olivier Dauwalder, Frédéric Laurent, François Vandenesch

Source: Frontiers in Microbiology, Vol 13 (2022)

Subject Terms: metagenomics, bacterial infections, molecular diagnosis, Nanopore sequencing, 16S rRNA, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.943441/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/af3a4a6605ee40c3b2dc77fca0c31368

High third-generation cephalosporin resistant Enterobacteriaceae prevalence rate among neonatal infections in Dakar, Senegal

Authors: Sebastien Breurec, Coralie Bouchiat, Jean-Marie Sire, Olivier Moquet, Raymond Bercion, Moussa Fafa Cisse, Philippe Glaser, Ousmane Ndiaye, Sidy Ka, Helene Salord, Abdoulaye Seck, Haby Signate Sy, Remy Michel, Benoit Garin

Source: BMC Infectious Diseases, Vol 16, Iss 1, Pp 1-7 (2016)

Subject Terms: Neonatal infections, Antimicrobial resistance, Third-generation cephalosporin-resistant Enterobacteriaceae, CTX-M-15, Africa, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12879-016-1935-y; https://doaj.org/toc/1471-2334

Access URL: https://doaj.org/article/a9f21a4cfbfe4b02aced67b91ce6327f

Human Genetic Susceptibility to Native Valve Staphylococcus aureus Endocarditis in Patients With S. aureus Bacteremia: Genome-Wide Association Study

Authors: Karen Moreau, Alisson Clemenceau, Vincent Le Moing, David Messika-Zeitoun, Paal S. Andersen, Niels E. Bruun, Robert L. Skov, Florence Couzon, Coralie Bouchiat, Marie L. Erpelding, Alex van Belkum, Yohan Bossé, Xavier Duval, Francois Vandenesch, The French VIRSTA-AEPEI, COFRASA Study Groups, The Danish DANSAB Study Group

Source: Frontiers in Microbiology, Vol 9 (2018)

Subject Terms: infectious endocarditis, Staphylococcus aureus, GWAS, bacteremia, SLC7A14, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/article/10.3389/fmicb.2018.00640/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/8e487163d3cb42e5909cd0971d822321

EDIN-B Promotes the Translocation of Staphylococcus aureus to the Bloodstream in the Course of Pneumonia

Authors: Johan Courjon, Patrick Munro, Yvonne Benito, Orane Visvikis, Coralie Bouchiat, Laurent Boyer, Anne Doye, Hubert Lepidi, Eric Ghigo, Jean-Philippe Lavigne, François Vandenesch, Emmanuel Lemichez

Source: Toxins, Vol 7, Iss 10, Pp 4131-4142 (2015)

Subject Terms: bacteremia, virulence factor, toxins, methicillin-resistant Staphylococcus aureus, Medicine

File Description: electronic resource

Relation: http://www.mdpi.com/2072-6651/7/10/4131; https://doaj.org/toc/2072-6651

Access URL: https://doaj.org/article/e24b1a3d505d42daaf3c50a45184f157

Routine Whole-Genome Sequencing for Outbreak Investigations of Staphylococcus aureus in a National Reference Center

Authors: Geraldine Durand, Fabien Javerliat, Michèle Bes, Jean-Baptiste Veyrieras, Ghislaine Guigon, Nathalie Mugnier, Stéphane Schicklin, Gaël Kaneko, Emmanuelle Santiago-Allexant, Coralie Bouchiat, Patrícia Martins-Simões, Frederic Laurent, Alex Van Belkum, François Vandenesch, Anne Tristan

Source: Frontiers in Microbiology, Vol 9 (2018)

Subject Terms: Staphylococcus aureus, whole-genome sequencing, national reference center, outbreak investigation, bioinformatics pipeline, de novo assembly, Microbiology, QR1-502

File Description: electronic resource

Relation: http://journal.frontiersin.org/article/10.3389/fmicb.2018.00511/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/818b6e0690ac485caca9800034659d28

The Hypervariable Region of Meningococcal Major Pilin PilE Controls the Host Cell Response via Antigenic Variation

Authors: Florence Miller, Gilles Phan, Terry Brissac, Coralie Bouchiat, Ghislaine Lioux, Xavier Nassif, Mathieu Coureuil

Source: mBio, Vol 5, Iss 1 (2014)

Subject Terms: Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2150-7511

Access URL: https://doaj.org/article/55b992170e664b94b197f36570d33931

Basic rules of hygiene protect health care and lab workers from nasal colonization by Staphylococcus aureus: an international cross-sectional study.

Authors: Mitra Saadatian-Elahi, Anne Tristan, Frédéric Laurent, Jean-Philippe Rasigade, Coralie Bouchiat, Anne-Gaëlle Ranc, Gérard Lina, Olivier Dauwalder, Jérôme Etienne, Michèle Bes, François Vandenesch

Source: PLoS ONE, Vol 8, Iss 12, p e82851 (2013)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24367562/?tool=EBI; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/a2323738aa9542f2899b2c7857a56ca6

Class D OXA-48 Carbapenemase in Multidrug-Resistant Enterobacteria, Senegal

Authors: Olivier Moquet, Coralie Bouchiat, Alfred Kinana, Abdoulaye Seck, Omar Arouna, Raymond Bercion, Sebastien Breurec, Benoit Garin

Source: Emerging Infectious Diseases, Vol 17, Iss 1, Pp 143-144 (2011)

Subject Terms: Nosocomial infections, bacteria, enterobacteria, Senegal, Africa, drug resistance, Medicine, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: https://wwwnc.cdc.gov/eid/article/17/1/10-0244_article; https://doaj.org/toc/1080-6040; https://doaj.org/toc/1080-6059

Access URL: https://doaj.org/article/79288e7be0ad402ab701938546940f74