ATG9A facilitates the closure of mammalian autophagosomes.

Authors: Javed, Ruheena^1,2, Mari, Muriel³, Trosdal, Einar^1,2, Duque, Thabata^1,2, Paddar, Masroor Ahmad^1,2, Allers, Lee^1,2, Mudd, Michal H.¹, Claude-Taupin, Aurore¹, Akepati, Prithvi Reddy⁴, Hendrix, Emily⁵, Yi He⁵, Salemi, Michelle⁶, Phinney, Brett⁶, Yasuo Uchiyama⁷, Reggiori, Fulvio³, Deretic, Vojo^1,2, vderetic@salud.unm.edu

Source: Journal of Cell Biology; 2/3/2025, Vol. 224 Issue 2, p1-22, 29p

Mammalian hybrid pre-autophagosomal structure HyPAS generates autophagosomes

Authors: Kumar, Suresh, Javed, Ruheena, Mudd, Michal, Pallikkuth, Sandeep, Lidke, Keith A., Jain, Ashish, Tangavelou, Karthikeyan, Gudmundsson, Sigurdur Runar, Ye, Chunyan, Rusten, Tor Erik, Anonsen, Jan Haug, Lystad, Alf Håkon, Claude-Taupin, Aurore, Simonsen, Anne, Salemi, Michelle, Phinney, Brett, Li, Jing, Guo, Lian-Wang, Bradfute, Steven B., Timmins, Graham S., Eskelinen, Eeva-Liisa, Deretic, Vojo

Source: In Cell 24 November 2021 184(24):5950-5969

Phosphoinositides: Functions in autophagy-related stress responses

Authors: Claude-Taupin, Aurore, Morel, Etienne

Source: In BBA - Molecular and Cell Biology of Lipids June 2021 1866(6)

Galectin-3 Coordinates a Cellular System for Lysosomal Repair and Removal

Authors: Jia, Jingyue, Claude-Taupin, Aurore, Gu, Yuexi, Choi, Seong Won, Peters, Ryan, Bissa, Bhawana, Mudd, Michal H., Allers, Lee, Pallikkuth, Sandeep, Lidke, Keith A., Salemi, Michelle, Phinney, Brett, Mari, Muriel, Reggiori, Fulvio, Deretic, Vojo

Source: In Developmental Cell 6 January 2020 52(1):69-87

Mammalian ATG8 proteins maintain autophagosomal membrane integrity through ESCRTs

Authors: Javed, Ruheena, Jain, Ashish, Duque, Thabata, Hendrix, Emily, Paddar, Masroor Ahmad, Khan, Sajjad, Claude‐Taupin, Aurore, Jia, Jingyue, Allers, Lee, Wang, Fulong, Mudd, Michal, Timmins, Graham, Lidke, Keith, Rusten, Tor Erik, Akepati, Prithvi Reddy, He, Yi, Reggiori, Fulvio, Eskelinen, Eeva‐Liisa, Deretic, Vojo

Source: EMBO journal. 42(14)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100187366591.0x000001&indx=1&recIds=ETOCvdc_100187366591.0x000001

Role of autophagy in IL-1β export and release from cells

Authors: Claude-Taupin, Aurore, Bissa, Bhawana, Jia, Jingyue, Gu, Yuexi, Deretic, Vojo

Source: In Seminars in Cell and Developmental Biology November 2018 83:36-41

Galectins Control mTOR in Response to Endomembrane Damage

Authors: Jia, Jingyue, Abudu, Yakubu Princely, Claude-Taupin, Aurore, Gu, Yuexi, Kumar, Suresh, Choi, Seong Won, Peters, Ryan, Mudd, Michal H., Allers, Lee, Salemi, Michelle, Phinney, Brett, Johansen, Terje, Deretic, Vojo

Source: In Molecular Cell 5 April 2018 70(1):120-135

MERIT, a cellular system coordinating lysosomal repair, removal and replacement

Authors: Jia, Jingyue, Claude-Taupin, Aurore, Gu, Yuexi, Choi, Seong Won, Peters, Ryan, Bissa, Bhawana, Mudd, Michal H., Allers, Lee, Pallikkuth, Sandeep, Lidke, Keith A., Salemi, Michelle, Phinney, Brett, Mari, Muriel, Reggiori, Fulvio, Deretic, Vojo

Source: Autophagy. 16(8):1539-1541

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100110821445.0x000001&indx=1&recIds=ETOCvdc_100110821445.0x000001

Mechanism of Stx17 recruitment to autophagosomes via IRGM and mammalian Atg8 proteins

Authors: Kumar, Suresh, Jain, Ashish, Farzam, Farzin, Jia, Jingyue, Gu, Yuexi, Choi, Seong Won, Mudd, Michal H., Claude-Taupin, Aurore, Wester, Michael J., Lidke, Keith A.

Source: Journal of cell biology. 217(3):997-1014

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN615033179&indx=1&recIds=ETOCRN615033179

To squeeze or not: Regulation of cell size by mechanical forces in development and human diseases.

Authors: Claude‐Taupin, Aurore¹ (AUTHOR) aurore.claude-taupin@inserm.fr, Dupont, Nicolas¹ (AUTHOR) nicolas.dupont@inserm.fr

Source: Biology of the Cell (Wiley-Blackwell). Feb2024, Vol. 116 Issue 2, p1-13. 13p.

Subject Terms: *CELL size, *CELLULAR control mechanisms, *CELL physiology, *CELL morphology, *CELL communication

Autophagy's secret life: secretion instead of degradation

Authors: Claude-Taupin, Aurore, Jia, Jingyue, Mudd, Michal, Deretic, Vojo

Source: Essays in biochemistry. 61(6):637-647

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN618761940&indx=1&recIds=ETOCRN618761940

Galectins control MTOR and AMPK in response to lysosomal damage to induce autophagy

Authors: Jia, Jingyue, Abudu, Yakubu Princely, Claude-Taupin, Aurore, Gu, Yuexi, Kumar, Suresh, Choi, Seong Won, Peters, Ryan, Mudd, Michal H., Allers, Lee, Salemi, Michelle, Phinney, Brett, Johansen, Terje, Deretic, Vojo

Source: Autophagy. 15(1):169-171

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100074640913.0x000001&indx=1&recIds=ETOCvdc_100074640913.0x000001

A historical perspective of macroautophagy regulation by biochemical and biomechanical stimuli.

Authors: Dupont, Nicolas¹ (AUTHOR) nicolas.dupont@inserm.fr, Claude‐Taupin, Aurore¹ (AUTHOR) aurore.claude-taupin@inserm.fr, Codogno, Patrice¹ (AUTHOR) patrice.codogno@inserm.fr

Source: FEBS Letters. Jan2024, Vol. 598 Issue 1, p17-31. 15p.

Subject Terms: *CILIA & ciliary motion, *MACHINE translating, *SHEARING force, *CELLULAR control mechanisms, *AMP-activated protein kinases, *CELLULAR signal transduction

The AMPK-Sirtuin 1-YAP axis is regulated by fluid flow intensity and controls autophagy flux in kidney epithelial cells.

Authors: Claude-Taupin, Aurore, Isnard, Pierre, Bagattin, Alessia, Kuperwasser, Nicolas, Roccio, Federica, Ruscica, Biagina, Goudin, Nicolas, Garfa-Traoré, Meriem, Regnier, Alice, Turinsky, Lisa, Burtin, Martine, Foretz, Marc, Pontoglio, Marco, Morel, Etienne, Viollet, Benoit, Terzi, Fabiola, Codogno, Patrice, Dupont, Nicolas

Source: Nature Communications; 6/26/2023, Vol. 14 Issue 1, p1-20, 20p

Chapter 2 - Monitoring lipophagy in kidney epithelial cells in response to shear stress

Authors: Roccio, Federica, Claude-Taupin, Aurore, Botti, Joëlle, Morel, Etienne, Codogno, Patrice, Dupont, Nicolas ^⁎

Source: In Methods in Cell Biology 2021 164:11-25

Links between autophagy and tissue mechanics.

Authors: Claude-Taupin, Aurore¹, Codogno, Patrice¹ patrice.codogno@inserm.fr, Dupont, Nicolas¹ nicolas.dupont@inserm.fr

Source: Journal of Cell Science. Sep2022, Vol. 135 Issue 17, p1-13. 13p.

Subject Terms: *TISSUE mechanics, *CELL morphology, *BIOLOGICAL transport, *ORGANELLES, *AUTOPHAGY, *CELLULAR aging

Yapping at the autophagy door? The answer is flowing in the kidney proximal tubule.

Authors: Claude-Taupin, Aurore¹ (AUTHOR), Terzi, Fabiola¹ (AUTHOR), Codogno, Patrice¹ (AUTHOR), Dupont, Nicolas¹ (AUTHOR) nicolas.dupont@inserm.fr

Source: Autophagy. Jun2024, Vol. 20 Issue 6, p1465-1466. 2p.

Proximity Ligation In situ Assay is a Powerful Tool to Monitor Specific ATG Protein Interactions following Autophagy Induction.

Authors: Gauthier, Thierry¹, Claude-Taupin, Aurore¹, Delage-Mourroux, Régis¹, Boyer-Guittaut, Michaël¹, Hervouet, Eric¹ eric.hervouet@univ-fcomte.fr

Source: PLoS ONE. Jun2015, Vol. 10 Issue 6, p1-16. 16p.

Subject Terms: *AUTOPHAGY, *LIGATURE (Surgery), *PROTEIN-protein interactions, *CYTOPLASM, *ORGANELLES, *MITOCHONDRIA

Cellular and molecular mechanism for secretory autophagy

Authors: Kimura, Tomonori, Jia, Jingyue, Claude-Taupin, Aurore, Kumar, Suresh, Choi, Seong Won, Gu, Yuexi, Mudd, Michal, Dupont, Nicolas, Jiang, Shanya, Peters, Ryan, Farzam, Farzin, Jain, Ashish, Lidke, Keith A., Adams, Christopher M., Johansen, Terje, Deretic, Vojo

Source: Autophagy. 13(6):1084-1085

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100048642066.0x000001&indx=1&recIds=ETOCvdc_100048642066.0x000001

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