Ancestral diversity in lipoprotein(a) studies helps address evidence gaps

Authors: Adolfo Correa, Annie Green Howard, Kari E North, Jerome I Rotter, Stephen S Rich, Ulrike Peters, Zhe Wang, Michael Y Tsai, Penny Gordon-Larsen, Christie Ballantyne, Shia T Kent, Ruth J F Loos, Christy L Avery, Xiuqing Guo, Jie Yao, Yao Hu, Mariaelisa Graff, Paul S de Vries, Keri L Monda, Moa P Lee, Sofia F Dimos, Laura M Raffield, Anna F Ballou, Carolina G Downie, Christopher H Arehart, Zhaohui Du, Christopher R Gignoux, Jeffrey Haessler, Helina Kassahun, J Antonio G Lopez, Michael H Preuss, Shannon L Rhodes, Rina Yarosh, Charles L Kooperberg

Source: Open Heart, Vol 10, Iss 2 (2023)

Subject Terms: Diseases of the circulatory (Cardiovascular) system, RC666-701

File Description: electronic resource

Relation: https://openheart.bmj.com/content/10/2/e002382.full; https://doaj.org/toc/2053-3624

Access URL: https://doaj.org/article/1a269fc98b7043cc85c2bdef81e77451

COVID-19 Surveillance in the Biobank at the Colorado Center for Personalized Medicine: Observational Study

Authors: Randi K Johnson, Katie M Marker, David Mayer, Jonathan Shortt, David Kao, Kathleen C Barnes, Jan T Lowery, Christopher R Gignoux

Source: JMIR Public Health and Surveillance, Vol 8, Iss 6, p e37327 (2022)

Subject Terms: Public aspects of medicine, RA1-1270

File Description: electronic resource

Relation: https://publichealth.jmir.org/2022/6/e37327; https://doaj.org/toc/2369-2960

Access URL: https://doaj.org/article/30b6806407254a9c9bf7278937a205b6

Allele imputation for the killer cell immunoglobulin-like receptor KIR3DL1/S1.

Authors: Genelle F Harrison, Laura Ann Leaton, Erica A Harrison, Katherine M Kichula, Marte K Viken, Jonathan Shortt, Christopher R Gignoux, Benedicte A Lie, Damjan Vukcevic, Stephen Leslie, Paul J Norman

Source: PLoS Computational Biology, Vol 18, Iss 2, p e1009059 (2022)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

Access URL: https://doaj.org/article/a40864831cbd4d36b90418c41972b80d

Phylodynamics of a regional SARS-CoV-2 rapid spreading event in Colorado in late 2020.

Authors: Kristen J Wade, Samantha Tisa, Chloe Barrington, Jesslyn C Henriksen, Kristy R Crooks, Christopher R Gignoux, Austin T Almand, J Jordan Steel, John C Sitko, Joseph W Rohrer, Douglas P Wickert, Erin A Almand, David D Pollock, Olivia S Rissland

Source: PLoS ONE, Vol 17, Iss 10, p e0274050 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/40f82ee8be09455e8337d3cf9e3f0bc6

Protein prediction for trait mapping in diverse populations.

Authors: Ryan Schubert, Elyse Geoffroy, Isabelle Gregga, Ashley J Mulford, Francois Aguet, Kristin Ardlie, Robert Gerszten, Clary Clish, David Van Den Berg, Kent D Taylor, Peter Durda, W Craig Johnson, Elaine Cornell, Xiuqing Guo, Yongmei Liu, Russell Tracy, Matthew Conomos, Tom Blackwell, George Papanicolaou, Tuuli Lappalainen, Anna V Mikhaylova, Timothy A Thornton, Michael H Cho, Christopher R Gignoux, Leslie Lange, Ethan Lange, Stephen S Rich, Jerome I Rotter, NHLBI TOPMed Consortium, Ani Manichaikul, Hae Kyung Im, Heather E Wheeler

Source: PLoS ONE, Vol 17, Iss 2, p e0264341 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/2741c7e5394e4c0eba49bd272e4aab8d

On the cross-population generalizability of gene expression prediction models.

Authors: Kevin L Keys, Angel C Y Mak, Marquitta J White, Walter L Eckalbar, Andrew W Dahl, Joel Mefford, Anna V Mikhaylova, María G Contreras, Jennifer R Elhawary, Celeste Eng, Donglei Hu, Scott Huntsman, Sam S Oh, Sandra Salazar, Michael A Lenoir, Jimmie C Ye, Timothy A Thornton, Noah Zaitlen, Esteban G Burchard, Christopher R Gignoux

Source: PLoS Genetics, Vol 16, Iss 8, p e1008927 (2020)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/22c150d8426343a09ce557fa67ba7215

Genetic identification of a common collagen disease in Puerto Ricans via identity-by-descent mapping in a health system

Authors: Gillian Morven Belbin, Jacqueline Odgis, Elena P Sorokin, Muh-Ching Yee, Sumita Kohli, Benjamin S Glicksberg, Christopher R Gignoux, Genevieve L Wojcik, Tielman Van Vleck, Janina M Jeff, Michael Linderman, Claudia Schurmann, Douglas Ruderfer, Xiaoqiang Cai, Amanda Merkelson, Anne E Justice, Kristin L Young, Misa Graff, Kari E North, Ulrike Peters, Regina James, Lucia Hindorff, Ruth Kornreich, Lisa Edelmann, Omri Gottesman, Eli EA Stahl, Judy H Cho, Ruth JF Loos, Erwin P Bottinger, Girish N Nadkarni, Noura S Abul-Husn, Eimear E Kenny

Source: eLife, Vol 6 (2017)

Subject Terms: GWAS, medical genetics, population genetics, Electronic Health Records, collagen disorder, Medicine, Science, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://elifesciences.org/articles/25060; https://doaj.org/toc/2050-084X

Access URL: https://doaj.org/article/2d12ca3f02f1483fbfe397e1124b87d3

Admixture mapping in two Mexican samples identifies significant associations of locus ancestry with triglyceride levels in the BUD13/ZNF259/APOA5 region and fine mapping points to rs964184 as the main driver of the association signal.

Authors: Esteban J Parra, Andrew Mazurek, Christopher R Gignoux, Alexandra Sockell, Michael Agostino, Andrew P Morris, Lauren E Petty, Craig L Hanis, Nancy J Cox, Adan Valladares-Salgado, Jennifer E Below, Miguel Cruz

Source: PLoS ONE, Vol 12, Iss 2, p e0172880 (2017)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC5330487?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/c6c0c2bb5b144690b473cf07f4bb69c8

Differential methylation between ethnic sub-groups reflects the effect of genetic ancestry and environmental exposures

Authors: Joshua M Galanter, Christopher R Gignoux, Sam S Oh, Dara Torgerson, Maria Pino-Yanes, Neeta Thakur, Celeste Eng, Donglei Hu, Scott Huntsman, Harold J Farber, Pedro C Avila, Emerita Brigino-Buenaventura, Michael A LeNoir, Kelly Meade, Denise Serebrisky, William Rodríguez-Cintrón, Rajesh Kumar, Jose R Rodríguez-Santana, Max A Seibold, Luisa N Borrell, Esteban G Burchard, Noah Zaitlen

Source: eLife, Vol 6 (2017)

Subject Terms: methylation, epigenetics, ethnicity, Latinos, Medicine, Science, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://elifesciences.org/articles/20532; https://doaj.org/toc/2050-084X

Access URL: https://doaj.org/article/b0d45908dba14dbf845c1016fde9062b

The Great Migration and African-American Genomic Diversity.

Authors: Soheil Baharian, Maxime Barakatt, Christopher R Gignoux, Suyash Shringarpure, Jacob Errington, William J Blot, Carlos D Bustamante, Eimear E Kenny, Scott M Williams, Melinda C Aldrich, Simon Gravel

Source: PLoS Genetics, Vol 12, Iss 5, p e1006059 (2016)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4883799?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/230e1fca123e4f5fb44425aebe0d5c68

Strategies for Enriching Variant Coverage in Candidate Disease Loci on a Multiethnic Genotyping Array.

Authors: Stephanie A Bien, Genevieve L Wojcik, Niha Zubair, Christopher R Gignoux, Alicia R Martin, Jonathan M Kocarnik, Lisa W Martin, Steven Buyske, Jeffrey Haessler, Ryan W Walker, Iona Cheng, Mariaelisa Graff, Lucy Xia, Nora Franceschini, Tara Matise, Regina James, Lucia Hindorff, Loic Le Marchand, Kari E North, Christopher A Haiman, Ulrike Peters, Ruth J F Loos, Charles L Kooperberg, Carlos D Bustamante, Eimear E Kenny, Christopher S Carlson, PAGE Study

Source: PLoS ONE, Vol 11, Iss 12, p e0167758 (2016)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC5156387?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/058f951d52f948779c6f3905095aaf8f

Genomic Insights into the Ancestry and Demographic History of South America.

Authors: Julian R Homburger, Andrés Moreno-Estrada, Christopher R Gignoux, Dominic Nelson, Elena Sanchez, Patricia Ortiz-Tello, Bernardo A Pons-Estel, Eduardo Acevedo-Vasquez, Pedro Miranda, Carl D Langefeld, Simon Gravel, Marta E Alarcón-Riquelme, Carlos D Bustamante

Source: PLoS Genetics, Vol 11, Iss 12, p e1005602 (2015)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4670080?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/13ea7e55e3c143a6b66b487d01f1a7f9

Loss and Gain of Natural Killer Cell Receptor Function in an African Hunter-Gatherer Population.

Authors: Hugo G Hilton, Paul J Norman, Neda Nemat-Gorgani, Ana Goyos, Jill A Hollenbach, Brenna M Henn, Christopher R Gignoux, Lisbeth A Guethlein, Peter Parham

Source: PLoS Genetics, Vol 11, Iss 8, p e1005439 (2015)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4546388?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/48d329440aa04ca99896e97fb5f0f631

Reconstructing the population genetic history of the Caribbean.

Authors: Andrés Moreno-Estrada, Simon Gravel, Fouad Zakharia, Jacob L McCauley, Jake K Byrnes, Christopher R Gignoux, Patricia A Ortiz-Tello, Ricardo J Martínez, Dale J Hedges, Richard W Morris, Celeste Eng, Karla Sandoval, Suehelay Acevedo-Acevedo, Paul J Norman, Zulay Layrisse, Peter Parham, Juan Carlos Martínez-Cruzado, Esteban González Burchard, Michael L Cuccaro, Eden R Martin, Carlos D Bustamante

Source: PLoS Genetics, Vol 9, Iss 11, p e1003925 (2013)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3828151?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/6ce760bab47e46af9f4b7c20c351dac8

Reconstructing Native American migrations from whole-genome and whole-exome data.

Authors: Simon Gravel, Fouad Zakharia, Andres Moreno-Estrada, Jake K Byrnes, Marina Muzzio, Juan L Rodriguez-Flores, Eimear E Kenny, Christopher R Gignoux, Brian K Maples, Wilfried Guiblet, Julie Dutil, Marc Via, Karla Sandoval, Gabriel Bedoya, Genomes Project, Taras K Oleksyk, Andres Ruiz-Linares, Esteban G Burchard, Juan Carlos Martinez-Cruzado, Carlos D Bustamante

Source: PLoS Genetics, Vol 9, Iss 12, p e1004023 (2013)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3873240?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/43dd417ba05a439a8d9537b132edc580

Integration of mouse and human genome-wide association data identifies KCNIP4 as an asthma gene.

Authors: Blanca E Himes, Keith Sheppard, Annerose Berndt, Adriana S Leme, Rachel A Myers, Christopher R Gignoux, Albert M Levin, W James Gauderman, James J Yang, Rasika A Mathias, Isabelle Romieu, Dara G Torgerson, Lindsey A Roth, Scott Huntsman, Celeste Eng, Barbara Klanderman, John Ziniti, Jody Senter-Sylvia, Stanley J Szefler, Robert F Lemanske, Robert S Zeiger, Robert C Strunk, Fernando D Martinez, Homer Boushey, Vernon M Chinchilli, Elliot Israel, David Mauger, Gerard H Koppelman, Dirkje S Postma, Maartje A E Nieuwenhuis, Judith M Vonk, John J Lima, Charles G Irvin, Stephen P Peters, Michiaki Kubo, Mayumi Tamari, Yusuke Nakamura, Augusto A Litonjua, Kelan G Tantisira, Benjamin A Raby, Eugene R Bleecker, Deborah A Meyers, Stephanie J London, Kathleen C Barnes, Frank D Gilliland, L Keoki Williams, Esteban G Burchard, Dan L Nicolae, Carole Ober, Dawn L DeMeo, Edwin K Silverman, Beverly Paigen, Gary Churchill, Steve D Shapiro, Scott T Weiss

Source: PLoS ONE, Vol 8, Iss 2, p e56179 (2013)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3572953?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/b7148e73eae544b695d4b1d016395c4e

Population genetic structure and origins of Native Hawaiians in the multiethnic cohort study.

Authors: Sung K Kim, Christopher R Gignoux, Jeffrey D Wall, Annette Lum-Jones, Hansong Wang, Christopher A Haiman, Gary K Chen, Brian E Henderson, Laurence N Kolonel, Loic Le Marchand, Daniel O Stram, Richa Saxena, Iona Cheng

Source: PLoS ONE, Vol 7, Iss 11, p e47881 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3492381?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/b2dba8e7587e460c93522cc7dbb31b85

Genetic ancestry-smoking interactions and lung function in African Americans: a cohort study.

Authors: Melinda C Aldrich, Rajesh Kumar, Laura A Colangelo, L Keoki Williams, Saunak Sen, Stephen B Kritchevsky, Bernd Meibohm, Joshua Galanter, Donglei Hu, Christopher R Gignoux, Yongmei Liu, Tamara B Harris, Elad Ziv, Joseph Zmuda, Melissa Garcia, Tennille S Leak, Marilyn G Foreman, Lewis J Smith, Myriam Fornage, Kiang Liu, Esteban G Burchard, Health ABC and CARDIA Studies Groups

Source: PLoS ONE, Vol 7, Iss 6, p e39541 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3380861?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/4771a3039b7e41c19d779e0e2a3e7bf0

Development of a panel of genome-wide ancestry informative markers to study admixture throughout the Americas.

Authors: Joshua Mark Galanter, Juan Carlos Fernandez-Lopez, Christopher R Gignoux, Jill Barnholtz-Sloan, Ceres Fernandez-Rozadilla, Marc Via, Alfredo Hidalgo-Miranda, Alejandra V Contreras, Laura Uribe Figueroa, Paola Raska, Gerardo Jimenez-Sanchez, Irma Silva Zolezzi, Maria Torres, Clara Ruiz Ponte, Yarimar Ruiz, Antonio Salas, Elizabeth Nguyen, Celeste Eng, Lisbeth Borjas, William Zabala, Guillermo Barreto, Fernando Rondón González, Adriana Ibarra, Patricia Taboada, Liliana Porras, Fabián Moreno, Abigail Bigham, Gerardo Gutierrez, Tom Brutsaert, Fabiola León-Velarde, Lorna G Moore, Enrique Vargas, Miguel Cruz, Jorge Escobedo, José Rodriguez-Santana, William Rodriguez-Cintrón, Rocio Chapela, Jean G Ford, Carlos Bustamante, Daniela Seminara, Mark Shriver, Elad Ziv, Esteban Gonzalez Burchard, Robert Haile, Esteban Parra, Angel Carracedo, LACE Consortium

Source: PLoS Genetics, Vol 8, Iss 3, p e1002554 (2012)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3297575?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/002c53fbeead40a893843611ad753e11

Heterogeneity in genetic admixture across different regions of Argentina.

Authors: Sergio Avena, Marc Via, Elad Ziv, Eliseo J Pérez-Stable, Christopher R Gignoux, Cristina Dejean, Scott Huntsman, Gabriela Torres-Mejía, Julie Dutil, Jaime L Matta, Kenneth Beckman, Esteban González Burchard, María Laura Parolin, Alicia Goicoechea, Noemí Acreche, Mariel Boquet, María Del Carmen Ríos Part, Vanesa Fernández, Jorge Rey, Mariana C Stern, Raúl F Carnese, Laura Fejerman

Source: PLoS ONE, Vol 7, Iss 4, p e34695 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3323559?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/220aacfe966b4ae9964952d71fa571d0